RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TUBB8Q3ZCM7 444 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 NECTIN2Q92692 538 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 HOOK2Q96ED9 719 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 CCT8L2Q96SF2 557 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 EBF2Q9HAK2 575 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 BATF3Q9NR55 127 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 HOMER3Q9NSC5 361 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 SAMSN1Q9NSI8 373 aaKnown RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 FAM184BQ9ULE4 1060 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 SLC8A1P32418 973 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 SULT6B1Q6IMI4 303 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 TSEN2Q8NCE0 465 aaKnown RBP10.75□□□□□ -0.69
SF3A3-201ENST00000373019 MYCBPAPQ8TBZ2 947 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 CPLX3Q8WVH0 158 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 STK31Q9BXU1 1019 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 PCDHA5Q9Y5H7 936 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 SBNO1A3KN83 1393 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 CARMIL3Q8ND23 1372 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 PXDNLA1KZ92 1463 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 FAM163BP0C2L3 166 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 PBX1P40424 430 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 ERVK-24P63145 666 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 NBPF14Q5TI25 921 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 CCDC114Q96M63 670 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 TSPYL4Q9UJ04 414 aa10.75□□□□□ -0.69
SF3A3-201ENST00000373019 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3A3-201ENST00000373019 SMNDC1O75940 238 aaKnown RBP eCLIP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 CYP21A2P08686 494 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 SYKP43405 635 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 PTGISQ16647 500 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 EMC10Q5UCC4 262 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 MYSM1Q5VVJ2 828 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 SHC4Q6S5L8 630 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 OLFM4Q6UX06 510 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 STOX1Q6ZVD7 989 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 CLASRPQ8N2M8 674 aaKnown RBP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 NSMCE1Q8WV22 266 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 TRIM10Q9UDY6 481 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 FOXN1O15353 648 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 NLRP14Q86W24 1093 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 RSRC1Q96IZ7 334 aaKnown RBP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 NUP58Q9BVL2 599 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 HIP1O00291 1037 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 PDE2AO00408 941 aaPredicted RBP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 MFAP3LO75121 409 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 ATP1A1P05023 1023 aaKnown RBP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 CDC25CP30307 473 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 KRT32Q14532 448 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 KCTD16Q68DU8 428 aa10.74□□□□□ -0.69
SF3A3-201ENST00000373019 SND1Q7KZF4 910 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■□□□□ 10.8
SF3A3-201ENST00000373019 TRMT44Q8IYL2 757 aaKnown RBP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 ZNF513Q8N8E2 541 aaPredicted RBP10.74□□□□□ -0.69
SF3A3-201ENST00000373019 PLEKHG3A1L390 1219 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 MARCKSP29966 332 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 CASP14P31944 242 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 PRPHP41219 470 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 FXR1P51114 621 aaKnown RBP eCLIP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 XRCC4Q13426 336 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 LONRF3Q496Y0 759 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 CAPRIN2Q6IMN6 1127 aaKnown RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 KDM7AQ6ZMT4 941 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 NME9Q86XW9 330 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 HDAC7Q8WUI4 952 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 STAMBPL1Q96FJ0 436 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 ACSBG1Q96GR2 724 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 ACTR5Q9H9F9 607 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 STRCP1A6NGW2 1772 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 KIF28PB7ZC32 967 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 PSMD14O00487 310 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 PPP1R37O75864 691 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 APBA1Q02410 837 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 ANKRD20A8PQ5CZ79 823 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 KLHL23Q8NBE8 558 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 TAOK2Q9UL54 1235 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 CACNA1FO60840 1977 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 RNF225M0QZC1 329 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 OPA1O60313 960 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 RTN3O95197 1032 aaPredicted RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 FAM107AO95990 144 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 KRT14P02533 472 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 GYPCP04921 128 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 PYGLP06737 847 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 PAPD7Q5XG87 772 aaKnown RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 UBE3BQ7Z3V4 1068 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 ENOX1Q8TC92 643 aaKnown RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 AGXT2Q9BYV1 514 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 GJB4Q9NTQ9 266 aa10.73□□□□□ -0.69
SF3A3-201ENST00000373019 REXO2Q9Y3B8 237 aaKnown RBP10.73□□□□□ -0.69
SF3A3-201ENST00000373019 NNTQ13423 1086 aa10.72□□□□□ -0.69
SF3A3-201ENST00000373019 C1QTNF12Q5T7M4 302 aa10.72□□□□□ -0.69
SF3A3-201ENST00000373019 TBC1D31Q96DN5 1066 aa10.72□□□□□ -0.69
SF3A3-201ENST00000373019 COG3Q96JB2 828 aa10.72□□□□□ -0.69
SF3A3-201ENST00000373019 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
SF3A3-201ENST00000373019 PCDHGC5Q9Y5F6 944 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms