RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 VIPAS39Q9H9C1 493 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 CCP110O43303 1012 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 ATP1A1P05023 1023 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 CMA1P23946 247 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 CASP1P29466 404 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 PDCLQ13371 301 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 BYSLQ13895 437 aaKnown RBP9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 TRAPPC11Q7Z392 1133 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 STAG1Q8WVM7 1258 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 SLC26A6Q9BXS9 759 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 CENPHQ9H3R5 247 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 ANKRD33BA6NCL7 494 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 DNM1LO00429 736 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 ATF3P18847 181 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 FECHP22830 423 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 SEMA3FQ13275 785 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 SELENOOQ9BVL4 669 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 MAN1B1Q9UKM7 699 aa9.88□□□□□ -0.83
SMARCA1-203ENST00000371123 CDC25CP30307 473 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 INPP5BP32019 993 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 LRCH2Q5VUJ6 765 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 LLPHQ9BRT6 129 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 ZHX3Q9H4I2 956 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 SH3BP1Q9Y3L3 701 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 ROBO2Q9HCK4 1378 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 GNGT1P63211 74 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 AMOTL1Q8IY63 956 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 AENQ8WTP8 325 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 TBC1D22AQ8WUA7 517 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 NFE2L3Q9Y4A8 694 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 FAM237AA0A1B0GTK4 181 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 MAP3K13O43283 966 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 LDHAL6AQ6ZMR3 332 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 USP49Q70CQ1 688 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 CEP112Q8N8E3 955 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 ZNF496Q96IT1 587 aaPredicted RBP9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 ZNF396Q96N95 335 aaPredicted RBP9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 CHP1Q99653 195 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 LRRC4CQ9HCJ2 640 aa9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 DBNLQ9UJU6 430 aaKnown RBP9.87□□□□□ -0.83
SMARCA1-203ENST00000371123 CASP14P31944 242 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SARSP49591 514 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 KCNQ4P56696 695 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 KIF23Q02241 960 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 C6orf89Q6UWU4 347 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SYNE4Q8N205 404 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 JMYQ8N9B5 988 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 CABS1Q96KC9 395 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 PUS3Q9BZE2 481 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 COL16A1Q07092 1604 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 RANBP6O60518 1105 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 NEBLO76041 1014 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SSBP05455 408 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 MRPL12P52815 198 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SEC24CP53992 1094 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SAFBQ15424 915 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SMARCAL1Q9NZC9 954 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 LRP2BPQ9P2M1 347 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 A0A087X0B3 334 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 EIF3JO75822 258 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 STIM1Q13586 685 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 KIF4BQ2VIQ3 1234 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 ANO1Q5XXA6 986 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 KSR2Q6VAB6 950 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 CCNI2Q6ZMN8 369 aaPredicted RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 PIK3R5Q8WYR1 880 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 SENP2Q9HC62 589 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 VAT1LQ9HCJ6 419 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 DMGDHQ9UI17 866 aaKnown RBP9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 DUSP10Q9Y6W6 482 aa9.86□□□□□ -0.83
SMARCA1-203ENST00000371123 BCL9LQ86UU0 1499 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 CCDC175P0C221 793 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 GCFC2P16383 781 aaKnown RBP9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 PPARAQ07869 468 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 GBP6Q6ZN66 633 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 CCDC13Q8IYE1 715 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 AIDAQ96BJ3 306 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 CAPS2Q9BXY5 557 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 ERICH2A1L162 156 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 ZNF213O14771 459 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 IFIT3O14879 490 aaKnown RBP9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 MYO1BO43795 1136 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 UPP2O95045 317 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 LRRC24Q50LG9 513 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 RESP18Q5W5W9 173 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 PANX2Q96RD6 677 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 SLC40A1Q9NP59 571 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 KLC4Q9NSK0 619 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 HMG20BQ9P0W2 317 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 MYO6Q9UM54 1294 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 KLHL33A6NCF5 533 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 E7EWF7 191 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 YEATS4O95619 227 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 GUCY1A3Q02108 690 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 MAP2K1Q02750 393 aaPredicted RBP9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 SNX1Q13596 522 aa9.85□□□□□ -0.83
SMARCA1-203ENST00000371123 SLC39A14Q15043 492 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms