RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 NOX5Q96PH1 765 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 ATP8A2Q9NTI2 1148 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 CLTCL1P53675 1640 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 SCG2P13521 617 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 CHRNDQ07001 517 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 APOA5Q6Q788 366 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 IFT81Q8WYA0 676 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
DEPDC1-201ENST00000370966 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 BACH1O14867 736 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 SMTNP53814 917 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 SIK1P57059 783 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 SASH1O94885 1247 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 CALCOCO2Q13137 446 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 OR8K1Q8NGG5 319 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 SDR42E1Q8WUS8 393 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 STAMQ92783 540 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 TTC14Q96N46 770 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 PPP6R2O75170 966 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 U2AF2P26368 475 aaKnown RBP eCLIP13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 ADORA1P30542 326 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 MFSD14BQ5SR56 506 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 RNF26Q9BY78 433 aaPredicted RBP13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 ELF2Q15723 593 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 RPGRIP1Q96KN7 1286 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 ASAP1Q9ULH1 1129 aa13.22□□□□□ -0.29
DEPDC1-201ENST00000370966 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 HEG1Q9ULI3 1381 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 ARHGEF35A5YM69 484 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 A6NNZ2 444 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 EEF2P13639 858 aaKnown RBP13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 TNFAIP3P21580 790 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 NDUFA8P51970 172 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 ETF1P62495 437 aaKnown RBP13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 ASIC2Q16515 512 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 TUBB8Q3ZCM7 444 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 C8orf74Q6P047 294 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 FOXP1Q9H334 677 aaPredicted RBP13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 H7C1D1 291 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 ATP2B4P23634 1241 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 TSKSQ9UJT2 592 aa13.21□□□□□ -0.29
DEPDC1-201ENST00000370966 KIF4AO95239 1232 aa13.21□□□□□ -0.3
DEPDC1-201ENST00000370966 NF2P35240 595 aa13.21□□□□□ -0.3
DEPDC1-201ENST00000370966 TRAPPC10P48553 1259 aa13.21□□□□□ -0.3
DEPDC1-201ENST00000370966 DYMQ7RTS9 669 aa13.21□□□□□ -0.3
DEPDC1-201ENST00000370966 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.3
DEPDC1-201ENST00000370966 KIFAP3Q92845 792 aa13.21□□□□□ -0.3
DEPDC1-201ENST00000370966 GTPBP6O43824 516 aaPredicted RBP13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 PLCB3Q01970 1234 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 CHAMP1Q96JM3 812 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 ZBTB21Q9ULJ3 1066 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 MED14O60244 1454 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 RNF17Q9BXT8 1623 aaKnown RBP13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 PRAMEF22A3QJZ6 481 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 GNA14O95837 355 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 ADD2P35612 726 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 DNM2P50570 870 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 PLS1Q14651 629 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 NBPF14Q5TI25 921 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 LRRC8AQ8IWT6 810 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 IQCGQ9H095 443 aaKnown RBP13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 BLZF1Q9H2G9 400 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 KDM3AQ9Y4C1 1321 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 A2ML1A8K2U0 1454 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 NCBP1Q09161 790 aaKnown RBP13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 SPATA1Q5VX52 437 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 CHD1O14646 1710 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 TMEM110-MUSTN1A8MSY1 372 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 H0YIN7 160 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 FLOT1O75955 427 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 POLD1P28340 1107 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
DEPDC1-201ENST00000370966 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 GABPB1Q06547 395 aaPredicted RBP13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 TEKT1Q969V4 418 aa13.19□□□□□ -0.3
DEPDC1-201ENST00000370966 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms