RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.71■□□□□ 0.43
COL17A1-202ENST00000369733 CETN3O15182 167 aa17.71■□□□□ 0.43
COL17A1-202ENST00000369733 SLC35F6Q8N357 371 aa17.71■□□□□ 0.43
COL17A1-202ENST00000369733 FAN1Q9Y2M0 1017 aa17.71■□□□□ 0.43
COL17A1-202ENST00000369733 CTNNA1P35221 906 aaKnown RBP17.71■□□□□ 0.42
COL17A1-202ENST00000369733 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.42
COL17A1-202ENST00000369733 FERMT1Q9BQL6 677 aa17.71■□□□□ 0.42
COL17A1-202ENST00000369733 PLCB1Q9NQ66 1216 aa17.71■□□□□ 0.42
COL17A1-202ENST00000369733 PLS1Q14651 629 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 ATP7AQ04656 1500 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 PTPN21Q16825 1174 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 UBL4BQ8N7F7 174 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 FTOQ9C0B1 505 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL17A1-202ENST00000369733 FRMD4BQ9Y2L6 1034 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 PCDHA5Q9Y5H7 936 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
COL17A1-202ENST00000369733 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 SARNPP82979 210 aaKnown RBP17.7■□□□□ 0.42
COL17A1-202ENST00000369733 DYMQ7RTS9 669 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 NSUN7Q8NE18 718 aaKnown RBP17.7■□□□□ 0.42
COL17A1-202ENST00000369733 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 PARD6BQ9BYG5 372 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 MBD5Q9P267 1494 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 FERP16591 822 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 MYOM2P54296 1465 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 TRAF1Q13077 416 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 CABP7Q86V35 215 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 RCOR1Q9UKL0 485 aa17.7■□□□□ 0.42
COL17A1-202ENST00000369733 EPN1Q9Y6I3 576 aaPredicted RBP17.7■□□□□ 0.42
COL17A1-202ENST00000369733 CASP14P31944 242 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 CACNA2D3Q8IZS8 1091 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 EXOC4Q96A65 974 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 NAP1L4Q99733 375 aaKnown RBP17.69■□□□□ 0.42
COL17A1-202ENST00000369733 ATP2A2P16615 1042 aaKnown RBP17.69■□□□□ 0.42
COL17A1-202ENST00000369733 PEX26Q7Z412 305 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 IL17REQ8NFR9 667 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 PRDM15P57071 1507 aaPredicted RBP17.69■□□□□ 0.42
COL17A1-202ENST00000369733 PNMA6AP0CW24 399 aaPredicted RBP17.69■□□□□ 0.42
COL17A1-202ENST00000369733 HNRNPH2P55795 449 aaKnown RBP17.69■□□□□ 0.42
COL17A1-202ENST00000369733 SLC39A14Q15043 492 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 FYB2Q5VWT5 728 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 SYCE1Q8N0S2 351 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 NUCKS1Q9H1E3 243 aaKnown RBP17.69■□□□□ 0.42
COL17A1-202ENST00000369733 DENND2AQ9ULE3 1009 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 CARMIL3Q8ND23 1372 aa17.69■□□□□ 0.42
COL17A1-202ENST00000369733 DNM2P50570 870 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 CLEC17AQ6ZS10 378 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 NLRC4Q9NPP4 1024 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 POLR3EQ9NVU0 708 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 LRWD1Q9UFC0 647 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 TTC37Q6PGP7 1564 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 RNF40O75150 1001 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 TTC19Q6DKK2 380 aaPredicted RBP17.68■□□□□ 0.42
COL17A1-202ENST00000369733 CALUO43852 315 aaPredicted RBP17.68■□□□□ 0.42
COL17A1-202ENST00000369733 CIB2O75838 187 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 SLC52A2Q9HAB3 445 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 CCDC151A5D8V7 595 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 FLOT1O75955 427 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 TSNAXIP1Q2TAA8 658 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 EFCAB13Q8IY85 973 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
COL17A1-202ENST00000369733 PPP1R12CQ9BZL4 782 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 ARHGEF5Q12774 1597 aa17.68■□□□□ 0.42
COL17A1-202ENST00000369733 TCP1P17987 556 aaKnown RBP17.68■□□□□ 0.42
COL17A1-202ENST00000369733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL17A1-202ENST00000369733 ABCA5Q8WWZ7 1642 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 F8W031 263 aaPredicted RBP17.67■□□□□ 0.42
COL17A1-202ENST00000369733 ARID5BQ14865 1188 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL17A1-202ENST00000369733 DENND2CQ68D51 928 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 JAG2Q9Y219 1238 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 KCNQ3O43525 872 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 ZNF589Q86UQ0 364 aaPredicted RBP17.67■□□□□ 0.42
COL17A1-202ENST00000369733 ZNF654Q8IZM8 581 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 H7C1D1 291 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 PPP6R2O75170 966 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 LDHBP07195 334 aaKnown RBP17.67■□□□□ 0.42
COL17A1-202ENST00000369733 RBL2Q08999 1139 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 ZNF853P0CG23 659 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 RESTQ13127 1097 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 SPATA5Q8NB90 893 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
COL17A1-202ENST00000369733 CYP21A2P08686 494 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 NEDD9Q14511 834 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 ENC1O14682 589 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 IL2RBP14784 551 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 PLCG2P16885 1265 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 SF3B2Q13435 895 aaKnown RBP17.66■□□□□ 0.42
COL17A1-202ENST00000369733 KRT25Q7Z3Z0 450 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 MYO1AQ9UBC5 1043 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 CEP128Q6ZU80 1094 aa17.66■□□□□ 0.42
COL17A1-202ENST00000369733 TLR7Q9NYK1 1049 aaKnown RBP17.66■□□□□ 0.42
COL17A1-202ENST00000369733 BUB1O43683 1085 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms