RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 KLRK1P26718 216 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 PTPAQ15257 358 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 RTKN2Q8IZC4 609 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 PIBF1Q8WXW3 757 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
USF1-202ENST00000368020 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.17
USF1-202ENST00000368020 PRPF3O43395 683 aaKnown RBP16.14■□□□□ 0.17
USF1-202ENST00000368020 PFKFB1P16118 471 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 PRDX5P30044 214 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 SYKP43405 635 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 TPM4P67936 248 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 IQCB1Q15051 598 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 CCDC93Q567U6 631 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 PLA2G4DQ86XP0 818 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 DIS3L2Q8IYB7 885 aaKnown RBP16.14■□□□□ 0.17
USF1-202ENST00000368020 ZNF287Q9HBT7 754 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 GJB4Q9NTQ9 266 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 ZNF75DP51815 510 aa16.13■□□□□ 0.17
USF1-202ENST00000368020 DHX8Q14562 1220 aaKnown RBP16.13■□□□□ 0.17
USF1-202ENST00000368020 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
USF1-202ENST00000368020 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
USF1-202ENST00000368020 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
USF1-202ENST00000368020 KRI1Q8N9T8 703 aaKnown RBP16.13■□□□□ 0.17
USF1-202ENST00000368020 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
USF1-202ENST00000368020 FHDC1Q9C0D6 1143 aaPredicted RBP16.13■□□□□ 0.17
USF1-202ENST00000368020 HPSEQ9Y251 543 aa16.13■□□□□ 0.17
USF1-202ENST00000368020 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
USF1-202ENST00000368020 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 C21orf2O43822 256 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 TPM2P07951 284 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 KIF5BP33176 963 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 PPP4CP60510 307 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 OLFM4Q6UX06 510 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
USF1-202ENST00000368020 SUPT20HQ8NEM7 779 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 CCDC34Q96HJ3 373 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 PSMD1Q99460 953 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 EYA3Q99504 573 aa16.12■□□□□ 0.17
USF1-202ENST00000368020 PLCG2P16885 1265 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 TXNRD3Q86VQ6 643 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 VPS33BQ9H267 617 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 AP5Z1O43299 807 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 TROAPQ12815 778 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 DRC7Q8IY82 874 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 ZC3H12CQ9C0D7 883 aaKnown RBP16.11■□□□□ 0.17
USF1-202ENST00000368020 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
USF1-202ENST00000368020 ARFGEF1Q9Y6D6 1849 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 SMTNL1A8MU46 457 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 BTBD18B2RXH4 712 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 NEMFO60524 1076 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 WDHD1O75717 1129 aaPredicted RBP16.1■□□□□ 0.17
USF1-202ENST00000368020 MARCKSP29966 332 aaPredicted RBP16.1■□□□□ 0.17
USF1-202ENST00000368020 KRT2P35908 639 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 USP5P45974 858 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 NLRP12P59046 1061 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 C11orf57Q6ZUT1 292 aaPredicted RBP16.1■□□□□ 0.17
USF1-202ENST00000368020 TMTC3Q6ZXV5 915 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 DGKHQ86XP1 1220 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 FAM177A1Q8N128 213 aaPredicted RBP16.1■□□□□ 0.17
USF1-202ENST00000368020 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
USF1-202ENST00000368020 MYO1BO43795 1136 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 IL1R1P14778 569 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 GUCY1A2P33402 732 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 FUT2Q10981 343 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 COA1Q9GZY4 146 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 CDK5RAP2Q96SN8 1893 aa16.09■□□□□ 0.17
USF1-202ENST00000368020 PTPREP23469 700 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 GNAQP50148 359 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 C12orf60Q5U649 245 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 SHC4Q6S5L8 630 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 ANKS1AQ92625 1134 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 PHF20Q9BVI0 1012 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 TCP11L1Q9NUJ3 509 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.17
USF1-202ENST00000368020 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.17
USF1-202ENST00000368020 TUBE1Q9UJT0 475 aa16.08■□□□□ 0.17
USF1-202ENST00000368020 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 IKBKBO14920 756 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 DHX40Q8IX18 779 aaKnown RBP16.08■□□□□ 0.16
USF1-202ENST00000368020 CD209Q9NNX6 404 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 KCNH3Q9ULD8 1083 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
USF1-202ENST00000368020 PRDM1O75626 825 aa16.07■□□□□ 0.16
USF1-202ENST00000368020 TRAPPC10P48553 1259 aa16.07■□□□□ 0.16
USF1-202ENST00000368020 NOLC1Q14978 699 aaKnown RBP eCLIP16.07■□□□□ 0.16
USF1-202ENST00000368020 SPC24Q8NBT2 197 aa16.07■□□□□ 0.16
USF1-202ENST00000368020 TTC12Q9H892 705 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms