RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 DNAJA1P31689 397 aaKnown RBP5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 LRP8Q14114 963 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 PPP2R5EQ16537 467 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 MFSD4AQ8N468 514 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 TMEM40Q8WWA1 233 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 HEXIM2Q96MH2 286 aaKnown RBP5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 ZFP64Q9NPA5 681 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 CEP131Q9UPN4 1083 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 PRR36Q9H6K5 1346 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 HYAL3O43820 417 aaPredicted RBP5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 EIF6P56537 245 aaKnown RBP5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 IFI16Q16666 785 aaKnown RBP5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 AOC3Q16853 763 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 FLCNQ8NFG4 579 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 ATG4CQ96DT6 458 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 ZNF512BQ96KM6 892 aaPredicted RBP5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 SRRTQ9BXP5 876 aaKnown RBP5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 EHMT1Q9H9B1 1298 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 BSDC1Q9NW68 430 aaPredicted RBP5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 MAPK8IP1Q9UQF2 711 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 U3KQE9 123 aa5.51□□□□□ -1.53
RNU4-1-201ENST00000363925 TMEM265A0A087WTH1 108 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 PRR33A8MZF0 331 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 H3BS24 57 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 RBAK-RBAKDNI3L0D1 243 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 ATE1O95260 518 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 CD97P48960 835 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 OXCT1P55809 520 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 BNIP3Q12983 259 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 COL9A2Q14055 689 aaPredicted RBP5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 TP53INP2Q8IXH6 220 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 SLFN12Q8IYM2 578 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 HRASLS5Q96KN8 279 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 KREMEN1Q96MU8 473 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 FAM86C1Q9NVL1 165 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 PPP1R1BQ9UD71 204 aaPredicted RBP5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 KCNH3Q9ULD8 1083 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 ZNRF3Q9ULT6 936 aa5.5□□□□□ -1.53
RNU4-1-201ENST00000363925 CNTNAP4Q9C0A0 1308 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 IGF2BP3O00425 579 aaKnown RBP eCLIP5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 RGS13O14921 159 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 CLEC3AO75596 197 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 WNT11O96014 354 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 NME1P15531 152 aaKnown RBP5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 IKZF1Q13422 519 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 CLEC16AQ2KHT3 1053 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 ARTNQ5T4W7 220 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 RUFY4Q6ZNE9 571 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 DNAJB8Q8NHS0 232 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 MKRN2Q9H000 416 aaKnown RBP5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 ASCC2Q9H1I8 757 aaPredicted RBP5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 ZSWIM5Q9P217 1185 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 SLC5A6Q9Y289 635 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 MRVI1Q9Y6F6 885 aa5.49□□□□□ -1.53
RNU4-1-201ENST00000363925 LRRN2O75325 713 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 CD96P40200 585 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 KIR3DL1P43629 444 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 GJA8P48165 433 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 RNF4P78317 190 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 ARID5AQ03989 594 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 MSMPQ1L6U9 139 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 TDRD10Q5VZ19 366 aaKnown RBP5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 ZNF574Q6ZN55 896 aaPredicted RBP5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 VSIG10LQ86VR7 867 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 LSRQ86X29 649 aaPredicted RBP5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 RASGRP4Q8TDF6 673 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 PPP1R13LQ8WUF5 828 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 COX4I2Q96KJ9 171 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 HSPA12BQ96MM6 686 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 FBXL21Q9UKT6 434 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 PLAGL2Q9UPG8 496 aa5.48□□□□□ -1.53
RNU4-1-201ENST00000363925 SOX9P48436 509 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 CDCP2Q5VXM1 449 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 FAM214BQ7L5A3 538 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 CCDC144CPQ8IYA2 1237 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 STK11IPQ8N1F8 1099 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 Q8N3U1 123 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 RNF141Q8WVD5 230 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 UBE2FQ969M7 185 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 SEC16BQ96JE7 1060 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 SLC6A18Q96N87 628 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 SLC9A7Q96T83 725 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 MKNK2Q9HBH9 465 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 CCDC39Q9UFE4 941 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 R3HCC1Q9Y3T6 440 aaKnown RBP5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 CAPN6Q9Y6Q1 641 aa5.47□□□□□ -1.53
RNU4-1-201ENST00000363925 MEIS3P2A8K0S8 358 aa5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 UBOX5O94941 541 aa5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 TP53P04637 393 aaPredicted RBP5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 ATF4P18848 351 aaPredicted RBP5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 SPINK2P20155 84 aa5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 GUCY2CP25092 1073 aa5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 CLCN7P51798 805 aa5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 ZC3H6P61129 1189 aaKnown RBP5.46□□□□□ -1.54
RNU4-1-201ENST00000363925 PRKCQQ04759 706 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms