RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 USP17L10C9JJH3 530 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 EPB41L2O43491 1005 aaKnown RBP28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 REC8O95072 547 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 TSPY3P0CV98 308 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 TSPY8P0CW00 308 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 TFAP4Q01664 338 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 NECTIN1Q15223 517 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 BRI3BPQ8WY22 251 aa28.76■■■□□ 2.19
ALKAL1-201ENST00000358543 GREB1LQ9C091 1923 aaPredicted RBP28.75■■■□□ 2.19
ALKAL1-201ENST00000358543 RANBP6O60518 1105 aaKnown RBP28.75■■■□□ 2.19
ALKAL1-201ENST00000358543 MOGSQ13724 837 aa28.75■■■□□ 2.19
ALKAL1-201ENST00000358543 FASTKD5Q7L8L6 764 aaKnown RBP28.75■■■□□ 2.19
ALKAL1-201ENST00000358543 PTPN18Q99952 460 aa28.75■■■□□ 2.19
ALKAL1-201ENST00000358543 TSPY2A6NKD2 308 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 ICA1Q05084 483 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 FAM47AQ5JRC9 791 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 OTUD7BQ6GQQ9 843 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 IFNL1Q8IU54 200 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 SIAH1Q8IUQ4 282 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 CNNM2Q9H8M5 875 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 TOMM22Q9NS69 142 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 WBP1LQ9NX94 342 aa28.74■■■□□ 2.19
ALKAL1-201ENST00000358543 PCNTO95613 3336 aa28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 ESR2Q92731 530 aa28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 KRT23Q9C075 422 aa28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 KIAA1683Q9H0B3 1180 aa28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 ARHGEF10LQ9HCE6 1279 aa28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 ZCCHC17Q9NP64 241 aaKnown RBP28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 PTPRFP10586 1907 aa28.73■■■□□ 2.19
ALKAL1-201ENST00000358543 NEDD4P46934 1319 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 EIF5BO60841 1220 aaKnown RBP28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 ALDH1A1P00352 501 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 USP14P54578 494 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 MTMR2Q13614 643 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 RRP12Q5JTH9 1297 aaKnown RBP28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 PPP4R3BQ5MIZ7 849 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 PROCA1Q8NCQ7 364 aaPredicted RBP28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 ACER1Q8TDN7 264 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 TCP11L1Q9NUJ3 509 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 MTMR4Q9NYA4 1195 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 NYAP2Q9P242 653 aa28.72■■■□□ 2.19
ALKAL1-201ENST00000358543 IGF2BP3O00425 579 aaKnown RBP eCLIP28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 EEF2P13639 858 aaKnown RBP28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 RNF20Q5VTR2 975 aa28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 CREB3L3Q68CJ9 461 aa28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 ANKRD23Q86SG2 305 aa28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 SH2D4AQ9H788 454 aa28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 TMX2Q9Y320 296 aa28.71■■■□□ 2.19
ALKAL1-201ENST00000358543 A0A1W2PRG0 241 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 SLC27A2O14975 620 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 HMGCS2P54868 508 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 USP17L2Q6R6M4 530 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 MKL1Q969V6 931 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 CEP95Q96GE4 821 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 C12orf42Q96LP6 360 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 FEZ1Q99689 392 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 BEGAINQ9BUH8 593 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 TMOD4Q9NZQ9 345 aa28.7■■■□□ 2.18
ALKAL1-201ENST00000358543 BTBD19C9JJ37 291 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 E7EWF7 191 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 CA12O43570 354 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 NOVP48745 357 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 TRDNQ13061 729 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 GPAT2Q6NUI2 795 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 CLEC10AQ8IUN9 316 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 FAM43AQ8N2R8 423 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 IL17RBQ9NRM6 502 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 EMILIN3Q9NT22 766 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 RNF186Q9NXI6 227 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 SAGE1Q9NXZ1 904 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 SYNPO2Q9UMS6 1093 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 SLC45A1Q9Y2W3 748 aa28.69■■■□□ 2.18
ALKAL1-201ENST00000358543 TTLL1O95922 423 aa28.68■■■□□ 2.18
ALKAL1-201ENST00000358543 GADL1Q6ZQY3 521 aa28.68■■■□□ 2.18
ALKAL1-201ENST00000358543 B4E1Z4 1266 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 KDM4AO75164 1064 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 TSGA10IPQ3SY00 556 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 NCOA7Q8NI08 942 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 NKX2-3Q8TAU0 364 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 CFHR5Q9BXR6 569 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 ZSWIM5Q9P217 1185 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 AGTPBP1Q9UPW5 1226 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 TAF6LQ9Y6J9 622 aa28.67■■■□□ 2.18
ALKAL1-201ENST00000358543 ATP2B2Q01814 1243 aa28.66■■■□□ 2.18
ALKAL1-201ENST00000358543 CCDC178Q5BJE1 867 aa28.66■■■□□ 2.18
ALKAL1-201ENST00000358543 STOX1Q6ZVD7 989 aa28.66■■■□□ 2.18
ALKAL1-201ENST00000358543 KCNB2Q92953 911 aa28.66■■■□□ 2.18
ALKAL1-201ENST00000358543 USP26Q9BXU7 913 aa28.66■■■□□ 2.18
ALKAL1-201ENST00000358543 CLIP2Q9UDT6 1046 aa28.66■■■□□ 2.18
ALKAL1-201ENST00000358543 HSPA4P34932 840 aa28.65■■■□□ 2.18
ALKAL1-201ENST00000358543 LPAR1Q92633 364 aa28.65■■■□□ 2.18
ALKAL1-201ENST00000358543 TTC14Q96N46 770 aa28.65■■■□□ 2.18
ALKAL1-201ENST00000358543 VCPKMTQ9H867 229 aa28.65■■■□□ 2.18
ALKAL1-201ENST00000358543 LOC285556D6RIA3 1793 aa28.65■■■□□ 2.18
ALKAL1-201ENST00000358543 PDHXO00330 501 aa28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 NMT2O60551 498 aa28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 TRPA1O75762 1119 aa28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 ZKSCAN1P17029 563 aaPredicted RBP28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 HOXA7P31268 230 aaPredicted RBP28.64■■■□□ 2.18
ALKAL1-201ENST00000358543 PABPC4Q13310 644 aaKnown RBP eCLIP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms