RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 NEDD1Q8NHV4 660 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 CEP95Q96GE4 821 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 USP26Q9BXU7 913 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 KCNH4Q9UQ05 1017 aa21.15■□□□□ 0.98
PDLIM7-202ENST00000355841 A0A1W2PRG0 241 aa21.14■□□□□ 0.97
PDLIM7-202ENST00000355841 SNAPC2Q13487 334 aa21.14■□□□□ 0.97
PDLIM7-202ENST00000355841 COL9A3Q14050 684 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-202ENST00000355841 ZKSCAN3Q9BRR0 538 aa21.14■□□□□ 0.97
PDLIM7-202ENST00000355841 WDR18Q9BV38 432 aa21.14■□□□□ 0.97
PDLIM7-202ENST00000355841 AS3MTQ9HBK9 375 aa21.14■□□□□ 0.97
PDLIM7-202ENST00000355841 PHIPQ8WWQ0 1821 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 PCP11498 1178 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 GTF2A2P52657 109 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 HMGCS2P54868 508 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 BRI3BPQ8WY22 251 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 ESR2Q92731 530 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 KANSL2Q9H9L4 492 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 IL17RBQ9NRM6 502 aa21.13■□□□□ 0.97
PDLIM7-202ENST00000355841 CCL15-CCL14A0A0B4J2E2 113 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 IGKV6D-41A0A0C4DH26 115 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 CXCL11O14625 94 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 CCL15Q16663 113 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 RNF20Q5VTR2 975 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 FEZ1Q99689 392 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 ZSWIM5Q9P217 1185 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 HSPA4P34932 840 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 MAP2K2P36507 400 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 BACE1P56817 501 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 PTPN18Q99952 460 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 KRT23Q9C075 422 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 CNNM2Q9H8M5 875 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 MTMR4Q9NYA4 1195 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 CLIP2Q9UDT6 1046 aa21.12■□□□□ 0.97
PDLIM7-202ENST00000355841 PLIN4Q96Q06 1357 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 A0A0G2JLL6 359 aaPredicted RBP21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 MANSC4A6NHS7 340 aaPredicted RBP21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 USP17L10C9JJH3 530 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 TRDNQ13061 729 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 MOGSQ13724 837 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 GADL1Q6ZQY3 521 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 CYB5R4Q7L1T6 521 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 CHST3Q7LGC8 479 aa21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 PRRT2Q7Z6L0 340 aaPredicted RBP21.11■□□□□ 0.97
PDLIM7-202ENST00000355841 CETPP11597 493 aa21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 ADCK5Q3MIX3 580 aa21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 RALYLQ86SE5 291 aaKnown RBP21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 NCOA7Q8NI08 942 aa21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 TBC1D2Q9BYX2 928 aa21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 STX8Q9UNK0 236 aa21.1■□□□□ 0.97
PDLIM7-202ENST00000355841 GREB1LQ9C091 1923 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 IGF2BP3O00425 579 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 ZKSCAN1P17029 563 aaPredicted RBP21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 ARHGEF10LQ9HCE6 1279 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 EMILIN3Q9NT22 766 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 SNX14Q9Y5W7 946 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 RAD21O60216 631 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 SREBF2Q12772 1141 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 KIAA1755Q5JYT7 1200 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 TREML2Q5T2D2 321 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 LRRC47Q8N1G4 583 aaKnown RBP21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 KIAA1683Q9H0B3 1180 aa21.09■□□□□ 0.97
PDLIM7-202ENST00000355841 TESPA1A2RU30 521 aaPredicted RBP21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 BTBD19C9JJ37 291 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 TTLL1O95922 423 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 TM4SF4P48230 202 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 SPICE1Q8N0Z3 855 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 KCNB2Q92953 911 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 NYAP2Q9P242 653 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 TMX2Q9Y320 296 aa21.08■□□□□ 0.96
PDLIM7-202ENST00000355841 C19orf81C9J6K1 198 aa21.07■□□□□ 0.96
PDLIM7-202ENST00000355841 GPAT2Q6NUI2 795 aa21.07■□□□□ 0.96
PDLIM7-202ENST00000355841 IFNL1Q8IU54 200 aa21.07■□□□□ 0.96
PDLIM7-202ENST00000355841 MB21D2Q8IYB1 491 aaPredicted RBP21.07■□□□□ 0.96
PDLIM7-202ENST00000355841 ANTXR2P58335 489 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 TSGA10IPQ3SY00 556 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 SH3D19Q5HYK7 790 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 RCSD1Q6JBY9 416 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 USP17L2Q6R6M4 530 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 IQCA1Q86XH1 822 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 ZSCAN10Q96SZ4 725 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 TCP11L1Q9NUJ3 509 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 TMOD4Q9NZQ9 345 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 THSD7BQ9C0I4 1608 aa21.06■□□□□ 0.96
PDLIM7-202ENST00000355841 EPB41L2O43491 1005 aaKnown RBP21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 CPA1P15085 419 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 INHBEP58166 350 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 FASTKD5Q7L8L6 764 aaKnown RBP21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 ENAHQ8N8S7 591 aaPredicted RBP21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 NEK1Q96PY6 1258 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 UBAC1Q9BSL1 405 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 MTMR7Q9Y216 660 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 TNKSO95271 1327 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 PTPRFP10586 1907 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 MCCP23508 829 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 USP14P54578 494 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 TCEANC2Q96MN5 208 aa21.05■□□□□ 0.96
PDLIM7-202ENST00000355841 JAKMIP1Q96N16 626 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms