RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ZBTB40Q9NUA8 1239 aa19.29■□□□□ 0.68
PDGFA-201ENST00000354513 ZNFX1Q9P2E3 1918 aaKnown RBP19.29■□□□□ 0.68
PDGFA-201ENST00000354513 MAGEB6P1A0A0J9YX57 407 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 VCAM1P19320 739 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 SLFNL1Q499Z3 407 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
PDGFA-201ENST00000354513 GPR142Q7Z601 462 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 LCORLQ8N3X6 602 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 ANKLE1Q8NAG6 615 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDGFA-201ENST00000354513 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 NUDT12Q9BQG2 462 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 KIAA1683Q9H0B3 1180 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 HMX1Q9NP08 348 aaPredicted RBP19.28■□□□□ 0.68
PDGFA-201ENST00000354513 OGDHLQ9ULD0 1010 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 ZNF532Q9HCE3 1301 aa19.28■□□□□ 0.68
PDGFA-201ENST00000354513 APBB1O00213 710 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 XRCC5P13010 732 aaKnown RBP19.27■□□□□ 0.68
PDGFA-201ENST00000354513 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.68
PDGFA-201ENST00000354513 MAPK4P31152 587 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 RAB3GAP1Q15042 981 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 ABCB5Q2M3G0 1257 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 CATSPERGQ6ZRH7 1159 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 TTC6Q86TZ1 520 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 KIF1BPQ96EK5 621 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 NR2E3Q9Y5X4 410 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
PDGFA-201ENST00000354513 GOLIM4O00461 696 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 EVI5O60447 810 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 CHGBP05060 677 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 CYP2D6P10635 497 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 CACNB2Q08289 660 aaPredicted RBP19.26■□□□□ 0.67
PDGFA-201ENST00000354513 SEPT2Q15019 361 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 HSP90AB4PQ58FF6 505 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 SLC9C2Q5TAH2 1124 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 NECAB2Q7Z6G3 386 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 RPAP2Q8IXW5 612 aaPredicted RBP19.26■□□□□ 0.67
PDGFA-201ENST00000354513 GTF3C2Q8WUA4 911 aaPredicted RBP19.26■□□□□ 0.67
PDGFA-201ENST00000354513 SDR42E1Q8WUS8 393 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 FEZ1Q99689 392 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 BTBD7Q9P203 1132 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 PLXNA1Q9UIW2 1896 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 DNAH12Q6ZR08 3092 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 LTBP2Q14767 1821 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 PFASO15067 1338 aa19.26■□□□□ 0.67
PDGFA-201ENST00000354513 A0A1W2PRG0 241 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L15C9J2P7 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L13C9JLJ4 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L11C9JVI0 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L18D6R9N7 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L22D6RA61 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L17D6RBQ6 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L19D6RCP7 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L20D6RJB6 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 SMIM22K7EJ46 135 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 CCND3P30281 292 aaPredicted RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 USP17L24Q0WX57 530 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 TTF1Q15361 905 aaPredicted RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 LBX2Q6XYB7 198 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 PLEKHH3Q7Z736 793 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 SLC44A5Q8NCS7 719 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 DNAJC2Q99543 621 aaKnown RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 DCP1AQ9NPI6 582 aaPredicted RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 RABGAP1Q9Y3P9 1069 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 SPDYE16A6NNV3 312 aaPredicted RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 ZKSCAN1P17029 563 aaPredicted RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 KIAA1755Q5JYT7 1200 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 CLASRPQ8N2M8 674 aaKnown RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 APBA2Q99767 749 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 CRNKL1Q9BZJ0 848 aaKnown RBP19.25■□□□□ 0.67
PDGFA-201ENST00000354513 FLRT1Q9NZU1 646 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 DDX19BQ9UMR2 479 aa19.25■□□□□ 0.67
PDGFA-201ENST00000354513 SOX1O00570 391 aaPredicted RBP19.24■□□□□ 0.67
PDGFA-201ENST00000354513 RGS2P41220 211 aa19.24■□□□□ 0.67
PDGFA-201ENST00000354513 USP14P54578 494 aa19.24■□□□□ 0.67
PDGFA-201ENST00000354513 LHX8Q68G74 356 aa19.24■□□□□ 0.67
PDGFA-201ENST00000354513 C7orf61Q8IZ16 206 aa19.24■□□□□ 0.67
PDGFA-201ENST00000354513 RPAP3Q9H6T3 665 aaPredicted RBP19.24■□□□□ 0.67
PDGFA-201ENST00000354513 ARMT1Q9H993 441 aa19.24■□□□□ 0.67
PDGFA-201ENST00000354513 MCM9Q9NXL9 1143 aa19.24■□□□□ 0.67
PDGFA-201ENST00000354513 PRKAB2O43741 272 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 IGHA2P01877 340 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 POLR3DP05423 398 aaPredicted RBP19.23■□□□□ 0.67
PDGFA-201ENST00000354513 COL6A1P12109 1028 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 ADD2P35612 726 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 MAP2K5Q13163 448 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 PDE3AQ14432 1141 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 CLEC10AQ8IUN9 316 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 NBPF3Q9H094 633 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 STAP2Q9UGK3 403 aa19.23■□□□□ 0.67
PDGFA-201ENST00000354513 MYH4Q9Y623 1939 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 IFIT2P09913 472 aaKnown RBP19.22■□□□□ 0.67
PDGFA-201ENST00000354513 MS4A1P11836 297 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 PTPREP23469 700 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 C20orf194Q5TEA3 1177 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 SIAH1Q8IUQ4 282 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 TRMT44Q8IYL2 757 aaKnown RBP19.22■□□□□ 0.67
PDGFA-201ENST00000354513 DYNLL2Q96FJ2 89 aa19.22■□□□□ 0.67
PDGFA-201ENST00000354513 GDF15Q99988 308 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms