RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 YBX3P16989 372 aaKnown RBP eCLIP21.41■■□□□ 1.022e-7■□□□□ 9.2
SNCG-201ENST00000348795 AKAP17AQ02040 695 aaKnown RBP21.41■■□□□ 1.02
SNCG-201ENST00000348795 SSRP1Q08945 709 aaKnown RBP21.41■■□□□ 1.02
SNCG-201ENST00000348795 IFFO2Q5TF58 517 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 RCSD1Q6JBY9 416 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 TMEM179Q6ZVK1 233 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 PNMA1Q8ND90 353 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 NKX2-3Q8TAU0 364 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 NUP133Q8WUM0 1156 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 KANSL2Q9H9L4 492 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 NCOA5Q9HCD5 579 aaKnown RBP21.41■■□□□ 1.02
SNCG-201ENST00000348795 ORC3Q9UBD5 711 aaPredicted RBP21.41■■□□□ 1.02
SNCG-201ENST00000348795 STX8Q9UNK0 236 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
SNCG-201ENST00000348795 DDX11L8A8MPP1 907 aa21.4■■□□□ 1.02
SNCG-201ENST00000348795 CTDNEP1O95476 244 aa21.4■■□□□ 1.02
SNCG-201ENST00000348795 TTLL1O95922 423 aa21.4■■□□□ 1.02
SNCG-201ENST00000348795 ZFPM1Q8IX07 1006 aa21.4■■□□□ 1.02
SNCG-201ENST00000348795 RNF26Q9BY78 433 aaPredicted RBP21.4■■□□□ 1.02
SNCG-201ENST00000348795 ZSCAN16Q9H4T2 348 aaPredicted RBP21.4■■□□□ 1.02
SNCG-201ENST00000348795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNCG-201ENST00000348795 MTMR4Q9NYA4 1195 aa21.4■■□□□ 1.02
SNCG-201ENST00000348795 IGKV6D-41A0A0C4DH26 115 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 FMNL1O95466 1100 aaPredicted RBP21.39■■□□□ 1.01
SNCG-201ENST00000348795 XBP1P17861 261 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 SMARCA1P28370 1054 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 ADD1P35611 737 aaKnown RBP21.39■■□□□ 1.01
SNCG-201ENST00000348795 MAP3K10Q02779 954 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 EVX2Q03828 476 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 NBPF9Q3BBW0 867 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 RBM26Q5T8P6 1007 aaKnown RBP21.39■■□□□ 1.01
SNCG-201ENST00000348795 C9orf131Q5VYM1 1079 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 SH3BP5LQ7L8J4 393 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 FAM177A1Q8N128 213 aaPredicted RBP21.39■■□□□ 1.01
SNCG-201ENST00000348795 SENP2Q9HC62 589 aa21.39■■□□□ 1.01
SNCG-201ENST00000348795 CNTNAP1P78357 1384 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 PITPNM2Q9BZ72 1349 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 JAK2O60674 1132 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 DEXIO95424 95 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 TRIM29Q14134 588 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 NTRK3Q16288 839 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 TMEM47Q9BQJ4 181 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 ADARB2Q9NS39 739 aaKnown RBP21.38■■□□□ 1.01
SNCG-201ENST00000348795 NYAP2Q9P242 653 aa21.38■■□□□ 1.01
SNCG-201ENST00000348795 MPHOSPH10O00566 681 aaKnown RBP21.37■■□□□ 1.01
SNCG-201ENST00000348795 CDC27P30260 824 aa21.37■■□□□ 1.01
SNCG-201ENST00000348795 CSPP1Q1MSJ5 1256 aa21.37■■□□□ 1.01
SNCG-201ENST00000348795 ABCB5Q2M3G0 1257 aa21.37■■□□□ 1.01
SNCG-201ENST00000348795 DDX11Q96FC9 970 aa21.37■■□□□ 1.01
SNCG-201ENST00000348795 CEP95Q96GE4 821 aa21.37■■□□□ 1.01
SNCG-201ENST00000348795 FAM217BQ9NTX9 383 aaPredicted RBP21.37■■□□□ 1.01
SNCG-201ENST00000348795 MTMR6Q9Y217 621 aa21.37■■□□□ 1.01
SNCG-201ENST00000348795 VPS37CA5D8V6 355 aaPredicted RBP21.36■■□□□ 1.01
SNCG-201ENST00000348795 NMT2O60551 498 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 F13A1P00488 732 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 AKR1B1P15121 316 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 RASA3Q14644 834 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 GRM4Q14833 912 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 NFKBIBQ15653 356 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 TBC1D10BQ4KMP7 808 aaPredicted RBP21.36■■□□□ 1.01
SNCG-201ENST00000348795 DCAF15Q66K64 600 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 SAMD7Q7Z3H4 446 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 MKL1Q969V6 931 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 C8orf76Q96K31 380 aa21.36■■□□□ 1.01
SNCG-201ENST00000348795 PRPF3O43395 683 aaKnown RBP21.35■■□□□ 1.01
SNCG-201ENST00000348795 TMTC3Q6ZXV5 915 aa21.35■■□□□ 1.01
SNCG-201ENST00000348795 L3MBTL3Q96JM7 780 aaPredicted RBP21.35■■□□□ 1.01
SNCG-201ENST00000348795 MYL10Q9BUA6 226 aa21.35■■□□□ 1.01
SNCG-201ENST00000348795 HACL1Q9UJ83 578 aa21.35■■□□□ 1.01
SNCG-201ENST00000348795 ZDHHC9Q9Y397 364 aa21.35■■□□□ 1.01
SNCG-201ENST00000348795 SIPA1L1O43166 1804 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 GREB1LQ9C091 1923 aaPredicted RBP21.34■■□□□ 1.01
SNCG-201ENST00000348795 PARP1P09874 1014 aaKnown RBP21.34■■□□□ 1.01
SNCG-201ENST00000348795 FDPSP14324 419 aaKnown RBP21.34■■□□□ 1.01
SNCG-201ENST00000348795 RXRAP19793 462 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 ASPRV1Q53RT3 343 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 ATL3Q6DD88 541 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 CCDC144CPQ8IYA2 1237 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 SLC26A6Q9BXS9 759 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 SH2D4AQ9H788 454 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 DNAJC18Q9H819 358 aa21.34■■□□□ 1.01
SNCG-201ENST00000348795 BAG4O95429 457 aaKnown RBP21.33■■□□□ 1.01
SNCG-201ENST00000348795 MCM4P33991 863 aa21.33■■□□□ 1.01
SNCG-201ENST00000348795 PKP1Q13835 747 aa21.33■■□□□ 1.01
SNCG-201ENST00000348795 GPATCH4Q5T3I0 446 aaKnown RBP21.33■■□□□ 1.01
SNCG-201ENST00000348795 FBXO18Q8NFZ0 1043 aa21.33■■□□□ 1.01
SNCG-201ENST00000348795 ALG1Q9BT22 464 aa21.33■■□□□ 1.01
SNCG-201ENST00000348795 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.33■■□□□ 1.01
SNCG-201ENST00000348795 DEFB129Q9H1M3 183 aa21.33■■□□□ 1.01
SNCG-201ENST00000348795 IQCA1LA6NCM1 817 aa21.32■■□□□ 1
SNCG-201ENST00000348795 DCAF8L1A6NGE4 600 aa21.32■■□□□ 1
SNCG-201ENST00000348795 SAFBQ15424 915 aaKnown RBP eCLIP21.32■■□□□ 1
SNCG-201ENST00000348795 SUPT20HL1Q3ZLR7 823 aa21.32■■□□□ 1
SNCG-201ENST00000348795 USP50Q70EL3 339 aaPredicted RBP21.32■■□□□ 1
SNCG-201ENST00000348795 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
SNCG-201ENST00000348795 ZC3H15Q8WU90 426 aaKnown RBP21.32■■□□□ 1
SNCG-201ENST00000348795 TMEM39BQ9GZU3 492 aa21.32■■□□□ 1
SNCG-201ENST00000348795 ARHGEF10LQ9HCE6 1279 aa21.32■■□□□ 1
SNCG-201ENST00000348795 CLIP2Q9UDT6 1046 aa21.32■■□□□ 1
SNCG-201ENST00000348795 PGAP2Q9UHJ9 254 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms