RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 ZSCAN12O43309 604 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 TRIML1Q8N9V2 468 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 PHF20Q9BVI0 1012 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 PARP3Q9Y6F1 533 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 RTL9Q8NET4 1388 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 COL1A1P02452 1464 aaPredicted RBP20.3■□□□□ 0.84
IFFO1-201ENST00000336604 EVX2Q03828 476 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 IFIT1BQ5T764 474 aaKnown RBP20.3■□□□□ 0.84
IFFO1-201ENST00000336604 KLHL10Q6JEL2 608 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 KANK3Q6NY19 840 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 C3orf67Q6ZVT6 689 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 FCHSD1Q86WN1 690 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 ZNF804BA4D1E1 1349 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 XBP1P17861 261 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 PLCD1P51178 756 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 WDR24Q96S15 920 aa20.3■□□□□ 0.84
IFFO1-201ENST00000336604 STX10O60499 249 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 KRT2P35908 639 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 ZNF384Q8TF68 577 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 SYMPKQ92797 1274 aaKnown RBP20.29■□□□□ 0.84
IFFO1-201ENST00000336604 AATFQ9NY61 560 aaKnown RBP eCLIP20.29■□□□□ 0.84
IFFO1-201ENST00000336604 STRCQ7RTU9 1775 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 CD44P16070 742 aaKnown RBP20.29■□□□□ 0.84
IFFO1-201ENST00000336604 CLCN6P51797 869 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 STX17P56962 302 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 CATIPQ7Z7H3 387 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
IFFO1-201ENST00000336604 DESI2Q9BSY9 194 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 DOT1LQ8TEK3 1739 aa20.29■□□□□ 0.84
IFFO1-201ENST00000336604 PLCH1Q4KWH8 1693 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 TROAPQ12815 778 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 NR1I3Q14994 352 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 CDC5LQ99459 802 aaKnown RBP20.28■□□□□ 0.84
IFFO1-201ENST00000336604 CARD6Q9BX69 1037 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 FAM53CQ9NYF3 392 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 TEX33O43247 280 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 MNS1Q8NEH6 495 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 UBXN4Q92575 508 aa20.28■□□□□ 0.84
IFFO1-201ENST00000336604 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
IFFO1-201ENST00000336604 ERCC5P28715 1186 aaPredicted RBP20.27■□□□□ 0.84
IFFO1-201ENST00000336604 GNG11P61952 73 aa20.27■□□□□ 0.84
IFFO1-201ENST00000336604 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
IFFO1-201ENST00000336604 ZNF174Q15697 407 aa20.27■□□□□ 0.84
IFFO1-201ENST00000336604 PAGE5Q96GU1 130 aa20.27■□□□□ 0.84
IFFO1-201ENST00000336604 GNL3LQ9NVN8 582 aaKnown RBP20.27■□□□□ 0.84
IFFO1-201ENST00000336604 PRPF3O43395 683 aaKnown RBP20.27■□□□□ 0.83
IFFO1-201ENST00000336604 NMT2O60551 498 aa20.27■□□□□ 0.83
IFFO1-201ENST00000336604 MTF1Q14872 753 aa20.27■□□□□ 0.83
IFFO1-201ENST00000336604 IQCA1Q86XH1 822 aa20.27■□□□□ 0.83
IFFO1-201ENST00000336604 STAMQ92783 540 aa20.27■□□□□ 0.83
IFFO1-201ENST00000336604 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
IFFO1-201ENST00000336604 NPY5RQ15761 445 aa20.26■□□□□ 0.83
IFFO1-201ENST00000336604 DDB1Q16531 1140 aa20.26■□□□□ 0.83
IFFO1-201ENST00000336604 ERFEQ4G0M1 354 aa20.26■□□□□ 0.83
IFFO1-201ENST00000336604 APTXQ7Z2E3 356 aaKnown RBP20.26■□□□□ 0.83
IFFO1-201ENST00000336604 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
IFFO1-201ENST00000336604 CTR9Q6PD62 1173 aa20.26■□□□□ 0.83
IFFO1-201ENST00000336604 NOL10Q9BSC4 688 aaKnown RBP20.26■□□□□ 0.83
IFFO1-201ENST00000336604 MYH2Q9UKX2 1941 aa20.25■□□□□ 0.83
IFFO1-201ENST00000336604 USP17L12C9JPN9 530 aa20.25■□□□□ 0.83
IFFO1-201ENST00000336604 USP17L21D6R901 530 aa20.25■□□□□ 0.83
IFFO1-201ENST00000336604 TADA3O75528 432 aa20.25■□□□□ 0.83
IFFO1-201ENST00000336604 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
IFFO1-201ENST00000336604 MYH14Q7Z406 1995 aaKnown RBP20.25■□□□□ 0.83
IFFO1-201ENST00000336604 SYNRGQ9UMZ2 1314 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 COBLO75128 1261 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 PDE4CQ08493 712 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 CUL4BQ13620 913 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 SH3RF1Q7Z6J0 888 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 FAM84BQ96KN1 310 aaPredicted RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 BRIP1Q9BX63 1249 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 EPC1Q9H2F5 836 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 FHOD1Q9Y613 1164 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 BAZ2AQ9UIF9 1905 aaKnown RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 DUOX1Q9NRD9 1551 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 MYH6P13533 1939 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 SOWAHDA6NJG2 315 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 KLRK1P26718 216 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 DPYDQ12882 1025 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 PTGDRQ13258 359 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 KARSQ15046 597 aaKnown RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 TMTC3Q6ZXV5 915 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 CPLX3Q8WVH0 158 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 TNFRSF25Q93038 417 aa20.24■□□□□ 0.83
IFFO1-201ENST00000336604 SRRTQ9BXP5 876 aaKnown RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 BAZ2BQ9UIF8 2168 aaKnown RBP20.24■□□□□ 0.83
IFFO1-201ENST00000336604 VEGFAP15692 232 aaPredicted RBP20.23■□□□□ 0.83
IFFO1-201ENST00000336604 CASQ1P31415 396 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 UBE4AQ14139 1066 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 SPATA1Q5VX52 437 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
IFFO1-201ENST00000336604 FERMT2Q96AC1 680 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 CCDC34Q96HJ3 373 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 IRX2Q9BZI1 471 aaPredicted RBP20.23■□□□□ 0.83
IFFO1-201ENST00000336604 RBM28Q9NW13 759 aaKnown RBP20.23■□□□□ 0.83
IFFO1-201ENST00000336604 MINPP1Q9UNW1 487 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 CACNA1SQ13698 1873 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms