RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 ZFPM1Q8IX07 1006 aa14.69□□□□□ -0.06
PTPN6-201ENST00000318974 ZSCAN16Q9H4T2 348 aaPredicted RBP14.69□□□□□ -0.06
PTPN6-201ENST00000318974 TCP11L1Q9NUJ3 509 aa14.69□□□□□ -0.06
PTPN6-201ENST00000318974 CCDC39Q9UFE4 941 aa14.69□□□□□ -0.06
PTPN6-201ENST00000318974 SERPINB13Q9UIV8 391 aa14.69□□□□□ -0.06
PTPN6-201ENST00000318974 NID2Q14112 1375 aa14.69□□□□□ -0.06
PTPN6-201ENST00000318974 FUCA2Q9BTY2 467 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 EHD4Q9H223 541 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 NMT2O60551 498 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 CDKL5O76039 1030 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 LMNB1P20700 586 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 CDC27P30260 824 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 ADD1P35611 737 aaKnown RBP14.68□□□□□ -0.06
PTPN6-201ENST00000318974 CATIPQ7Z7H3 387 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 DGKHQ86XP1 1220 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 CCDC144CPQ8IYA2 1237 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 SPATA32Q96LK8 384 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 IL17RBQ9NRM6 502 aa14.68□□□□□ -0.06
PTPN6-201ENST00000318974 H3BQV1 296 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 RTN1Q16799 776 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 IFFO2Q5TF58 517 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
PTPN6-201ENST00000318974 NEDD1Q8NHV4 660 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 NUP133Q8WUM0 1156 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 ANKS1AQ92625 1134 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 FAM217BQ9NTX9 383 aaPredicted RBP14.67□□□□□ -0.06
PTPN6-201ENST00000318974 ZNF70Q9UC06 446 aaPredicted RBP14.67□□□□□ -0.06
PTPN6-201ENST00000318974 MYH1P12882 1939 aa14.67□□□□□ -0.06
PTPN6-201ENST00000318974 CCDC196A0A1B0GTZ2 297 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 CLRN2A0PK11 232 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 DDTLA6NHG4 134 aaPredicted RBP14.66□□□□□ -0.06
PTPN6-201ENST00000318974 CALM1P0DP23 149 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 CALM2P0DP24 149 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 CALM3P0DP25 149 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 RESTQ13127 1097 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 PPP2R5BQ15173 497 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 DPF2Q92785 391 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 ZBED3Q96IU2 234 aaPredicted RBP14.66□□□□□ -0.06
PTPN6-201ENST00000318974 MYOZ2Q9NPC6 264 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 PI4KBQ9UBF8 816 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 TAOK2Q9UL54 1235 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 GJA3Q9Y6H8 435 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 MYO1BO43795 1136 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 DDAH1O94760 285 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 ZNF280AP59817 542 aaPredicted RBP14.66□□□□□ -0.06
PTPN6-201ENST00000318974 RCSD1Q6JBY9 416 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 FAM173BQ6P4H8 233 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 SH3BP5LQ7L8J4 393 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 CRACR2BQ8N4Y2 399 aaPredicted RBP14.66□□□□□ -0.06
PTPN6-201ENST00000318974 FANCBQ8NB91 859 aa14.66□□□□□ -0.06
PTPN6-201ENST00000318974 LEO1Q8WVC0 666 aaPredicted RBP14.66□□□□□ -0.06
PTPN6-201ENST00000318974 GOLGA6L4A6NEF3 574 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 FDPSP14324 419 aaKnown RBP14.65□□□□□ -0.06
PTPN6-201ENST00000318974 GMPSP49915 693 aaPredicted RBP14.65□□□□□ -0.06
PTPN6-201ENST00000318974 NTRK3Q16288 839 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 TPRNQ4KMQ1 711 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
PTPN6-201ENST00000318974 KAT14Q9H8E8 782 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 ORC3Q9UBD5 711 aaPredicted RBP14.65□□□□□ -0.06
PTPN6-201ENST00000318974 CFAP45Q9UL16 551 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 ZKSCAN5Q9Y2L8 839 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 ECM29Q5VYK3 1845 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 COL2A1P02458 1487 aaPredicted RBP14.65□□□□□ -0.06
PTPN6-201ENST00000318974 ATRNL1Q5VV63 1379 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 TCP10L2B9ZVM9 353 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 WNT10BO00744 389 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 PPFIA3O75145 1194 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 ZNF541Q9H0D2 1346 aa14.65□□□□□ -0.06
PTPN6-201ENST00000318974 SHTN1A0MZ66 631 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 ZNF500O60304 480 aaPredicted RBP14.64□□□□□ -0.07
PTPN6-201ENST00000318974 CCDC192P0DO97 292 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 SHMT1P34896 483 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 TROAPQ12815 778 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 FKBP1CQ5VVH2 108 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 TRIM34Q9BYJ4 488 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 VEZTQ9HBM0 779 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 RBM28Q9NW13 759 aaKnown RBP14.64□□□□□ -0.07
PTPN6-201ENST00000318974 IFNAR1P17181 557 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 MAP3K11Q16584 847 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 MICALL2Q8IY33 904 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 CCDC17Q96LX7 622 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
PTPN6-201ENST00000318974 TFIP11Q9UBB9 837 aaKnown RBP14.64□□□□□ -0.07
PTPN6-201ENST00000318974 CNOT7Q9UIV1 285 aaKnown RBP14.64□□□□□ -0.07
PTPN6-201ENST00000318974 STX8Q9UNK0 236 aa14.64□□□□□ -0.07
PTPN6-201ENST00000318974 PLIN4Q96Q06 1357 aa14.63□□□□□ -0.07
PTPN6-201ENST00000318974 AKR1B1P15121 316 aa14.63□□□□□ -0.07
PTPN6-201ENST00000318974 SSRP1Q08945 709 aaKnown RBP14.63□□□□□ -0.07
PTPN6-201ENST00000318974 NBPF9Q3BBW0 867 aa14.63□□□□□ -0.07
PTPN6-201ENST00000318974 ATL3Q6DD88 541 aa14.63□□□□□ -0.07
PTPN6-201ENST00000318974 PNMA1Q8ND90 353 aa14.63□□□□□ -0.07
PTPN6-201ENST00000318974 DNAJC18Q9H819 358 aa14.63□□□□□ -0.07
PTPN6-201ENST00000318974 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.63□□□□□ -0.07
PTPN6-201ENST00000318974 YBX3P16989 372 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTPN6-201ENST00000318974 LIG1P18858 919 aa14.62□□□□□ -0.07
PTPN6-201ENST00000318974 RBM26Q5T8P6 1007 aaKnown RBP14.62□□□□□ -0.07
PTPN6-201ENST00000318974 FAM83AQ86UY5 434 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms