RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
HOXA3-201ENST00000317201 SNED1Q8TER0 1413 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 CTDNEP1O95476 244 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 SLC3A2P08195 630 aaKnown RBP16.85■□□□□ 0.29
HOXA3-201ENST00000317201 FKBP1AP62942 108 aaKnown RBP16.85■□□□□ 0.29
HOXA3-201ENST00000317201 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
HOXA3-201ENST00000317201 MFSD14BQ5SR56 506 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 FOXR1Q6PIV2 292 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 TMEM87AQ8NBN3 555 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 C7orf43Q8WVR3 580 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 LY9Q9HBG7 655 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 ORC4O43929 436 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 JAG2Q9Y219 1238 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 MYH2Q9UKX2 1941 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 SLX4Q8IY92 1834 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 KIF13BQ9NQT8 1826 aa16.85■□□□□ 0.29
HOXA3-201ENST00000317201 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
HOXA3-201ENST00000317201 FBXO18Q8NFZ0 1043 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 TRMT1Q9NXH9 659 aaKnown RBP16.84■□□□□ 0.29
HOXA3-201ENST00000317201 GOLGA8BA8MQT2 603 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 SEC31AO94979 1220 aaKnown RBP16.84■□□□□ 0.29
HOXA3-201ENST00000317201 SCP2P22307 547 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 GSCP56915 257 aaPredicted RBP16.84■□□□□ 0.29
HOXA3-201ENST00000317201 TPM4P67936 248 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 GPS2Q13227 327 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 TMEM67Q5HYA8 995 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
HOXA3-201ENST00000317201 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
HOXA3-201ENST00000317201 PTPDC1A2A3K4 754 aa16.83■□□□□ 0.29
HOXA3-201ENST00000317201 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.29
HOXA3-201ENST00000317201 KIF1CO43896 1103 aaKnown RBP16.83■□□□□ 0.29
HOXA3-201ENST00000317201 JAK2O60674 1132 aa16.83■□□□□ 0.29
HOXA3-201ENST00000317201 GRIK5Q16478 980 aa16.83■□□□□ 0.29
HOXA3-201ENST00000317201 SUPT20HQ8NEM7 779 aa16.83■□□□□ 0.29
HOXA3-201ENST00000317201 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.83■□□□□ 0.29
HOXA3-201ENST00000317201 USP17L12C9JPN9 530 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 USP17L21D6R901 530 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 IFIT3O14879 490 aaKnown RBP16.83■□□□□ 0.28
HOXA3-201ENST00000317201 TPM3P06753 285 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 MAGEA9P43362 315 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 MCTP2Q6DN12 878 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 CCDC34Q96HJ3 373 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 BAZ2AQ9UIF9 1905 aaKnown RBP16.83■□□□□ 0.28
HOXA3-201ENST00000317201 ERICH2A1L162 156 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 OAS2P29728 719 aaKnown RBP16.83■□□□□ 0.28
HOXA3-201ENST00000317201 CCT2P78371 535 aaKnown RBP16.83■□□□□ 0.28
HOXA3-201ENST00000317201 NKX2-3Q8TAU0 364 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 ERO1AQ96HE7 468 aa16.83■□□□□ 0.28
HOXA3-201ENST00000317201 RIMBP2O15034 1052 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 CDKL5O76039 1030 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 GTF2IP78347 998 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 TTC19Q6DKK2 380 aaPredicted RBP16.82■□□□□ 0.28
HOXA3-201ENST00000317201 MNS1Q8NEH6 495 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 EIF3CLB5ME19 914 aaKnown RBP16.82■□□□□ 0.28
HOXA3-201ENST00000317201 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 DIXDC1Q155Q3 683 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 SH3RF3Q8TEJ3 882 aaPredicted RBP16.82■□□□□ 0.28
HOXA3-201ENST00000317201 EIF3CQ99613 913 aaKnown RBP16.82■□□□□ 0.28
HOXA3-201ENST00000317201 MRIQ9BWK5 157 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 INCENPQ9NQS7 918 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 NAV1Q8NEY1 1877 aa16.82■□□□□ 0.28
HOXA3-201ENST00000317201 DDX60LQ5H9U9 1706 aaKnown RBP16.81■□□□□ 0.28
HOXA3-201ENST00000317201 VPS37CA5D8V6 355 aaPredicted RBP16.81■□□□□ 0.28
HOXA3-201ENST00000317201 CHRNA5P30532 468 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 ZSCAN16Q9H4T2 348 aaPredicted RBP16.81■□□□□ 0.28
HOXA3-201ENST00000317201 NCOA5Q9HCD5 579 aaKnown RBP16.81■□□□□ 0.28
HOXA3-201ENST00000317201 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 ZBTB43O43298 467 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 BTDP43251 543 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 USP5P45974 858 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
HOXA3-201ENST00000317201 PDE4BQ07343 736 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 WTAPQ15007 396 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 CPLX2Q6PUV4 134 aaKnown RBP16.81■□□□□ 0.28
HOXA3-201ENST00000317201 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 SLC12A7Q9Y666 1083 aa16.81■□□□□ 0.28
HOXA3-201ENST00000317201 FOCADQ5VW36 1801 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 SKIDA1Q1XH10 827 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 SYNE3Q6ZMZ3 975 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 UBAC1Q9BSL1 405 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 TAOK2Q9UL54 1235 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 CDK5RAP2Q96SN8 1893 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 CPLX1O14810 134 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 SLU7O95391 586 aaKnown RBP16.8■□□□□ 0.28
HOXA3-201ENST00000317201 SEC23AQ15436 765 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 NFXL1Q6ZNB6 911 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 SLC24A3Q9HC58 644 aa16.8■□□□□ 0.28
HOXA3-201ENST00000317201 G3V3G9 751 aa16.79■□□□□ 0.28
HOXA3-201ENST00000317201 H2AFXP16104 143 aaPredicted RBP16.79■□□□□ 0.28
HOXA3-201ENST00000317201 RRP12Q5JTH9 1297 aaKnown RBP16.79■□□□□ 0.28
HOXA3-201ENST00000317201 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
HOXA3-201ENST00000317201 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
HOXA3-201ENST00000317201 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms