RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RRP12Q5JTH9 1297 aaKnown RBP21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 MTA3Q9BTC8 594 aa21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 ZCCHC17Q9NP64 241 aaKnown RBP21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 NYAP2Q9P242 653 aa21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 LAMA4Q16363 1823 aa21.13■□□□□ 0.97
SSSCA1-201ENST00000309328 A0A0G2JLL6 359 aaPredicted RBP21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 TESPA1A2RU30 521 aaPredicted RBP21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 E7EWF7 191 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 TTLL1O95922 423 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 HMGB1P09429 215 aaKnown RBP21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 GUCY1A2P33402 732 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 GJA5P36382 358 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 SPP2Q13103 211 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 C8orf34Q49A92 452 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 PRRT2Q7Z6L0 340 aaPredicted RBP21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 FEZ1Q99689 392 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 USP26Q9BXU7 913 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 KIAA1683Q9H0B3 1180 aa21.12■□□□□ 0.97
SSSCA1-201ENST00000309328 NEDD4P46934 1319 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 TRIM75PA6NK02 468 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 ALDH1A1P00352 501 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 JAG1P78504 1218 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 MAP2K1Q02750 393 aaPredicted RBP21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 GRM1Q13255 1194 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 SART3Q15020 963 aaKnown RBP21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 SH3D19Q5HYK7 790 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 DNAJC5GQ8N7S2 189 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 PROCA1Q8NCQ7 364 aaPredicted RBP21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 CNKSR2Q8WXI2 1034 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 LPAR1Q92633 364 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 KCNB2Q92953 911 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 MS4A4AQ96JQ5 239 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 TTC14Q96N46 770 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 MTMR4Q9NYA4 1195 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 TMOD4Q9NZQ9 345 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 CEP350Q5VT06 3117 aa21.11■□□□□ 0.97
SSSCA1-201ENST00000309328 TM4SF4P48230 202 aa21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 KIF23Q02241 960 aaPredicted RBP21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 PABPC4Q13310 644 aaKnown RBP eCLIP21.1■□□□□ 0.974e-8■■■■□ 20.3
SSSCA1-201ENST00000309328 FAM47AQ5JRC9 791 aa21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 USP17L2Q6R6M4 530 aa21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 C12orf42Q96LP6 360 aa21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 UBAC1Q9BSL1 405 aa21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 UPF2Q9HAU5 1272 aaKnown RBP21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 GOPCQ9HD26 462 aa21.1■□□□□ 0.97
SSSCA1-201ENST00000309328 CCL15-CCL14A0A0B4J2E2 113 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 B4E1Z4 1266 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 KDM4AO75164 1064 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 NOVP48745 357 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 CCL15Q16663 113 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 DGKHQ86XP1 1220 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 MKL1Q969V6 931 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 CEP95Q96GE4 821 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 SLC45A1Q9Y2W3 748 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 TMX2Q9Y320 296 aa21.09■□□□□ 0.97
SSSCA1-201ENST00000309328 CA12O43570 354 aa21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 EEF2P13639 858 aaKnown RBP21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 PSMA5P28066 241 aa21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 ANAPC15P60006 121 aa21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 MKRN3Q13064 507 aaKnown RBP21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 MTMR2Q13614 643 aa21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 INCENPQ9NQS7 918 aa21.08■□□□□ 0.97
SSSCA1-201ENST00000309328 THSD7BQ9C0I4 1608 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 WDR19Q8NEZ3 1342 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 ERICH2A1L162 156 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 MCM5P33992 734 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 SHROOM1Q2M3G4 852 aaPredicted RBP21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 ANKRD23Q86SG2 305 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 ZSCAN10Q96SZ4 725 aaPredicted RBP21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 BEGAINQ9BUH8 593 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 ZSWIM5Q9P217 1185 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 STX8Q9UNK0 236 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 TACC3Q9Y6A5 838 aa21.07■□□□□ 0.96
SSSCA1-201ENST00000309328 MYH8P13535 1937 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 AOC2O75106 756 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 ATP2B2Q01814 1243 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 BRI3BPQ8WY22 251 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 NEK1Q96PY6 1258 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 VCPKMTQ9H867 229 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 PNMA3Q9UL41 463 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 AGTPBP1Q9UPW5 1226 aa21.06■□□□□ 0.96
SSSCA1-201ENST00000309328 TOP1P11387 765 aaKnown RBP21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 HMGCS2P54868 508 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 CCDC84Q86UT8 332 aaPredicted RBP21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 IFNL1Q8IU54 200 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 MB21D2Q8IYB1 491 aaPredicted RBP21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 TMTC2Q8N394 836 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 JMYQ8N9B5 988 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 GMCL1P1Q8NEA9 526 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 ANKS1AQ92625 1134 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 TMEM87BQ96K49 555 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 IL17RBQ9NRM6 502 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 SAGE1Q9NXZ1 904 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 CLIP2Q9UDT6 1046 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 ATAD5Q96QE3 1844 aa21.05■□□□□ 0.96
SSSCA1-201ENST00000309328 GREB1LQ9C091 1923 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms