RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 ADAMTS7Q9UKP4 1686 aa18.38■□□□□ 0.53
CCDC8-201ENST00000307522 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 A0A087WUV0 522 aaPredicted RBP18.37■□□□□ 0.53
CCDC8-201ENST00000307522 UBE2Q2LH0YL09 131 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 SYKP43405 635 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 KCNJ6P48051 423 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 ZNF34Q8IZ26 560 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 TRIM10Q9UDY6 481 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 SYF2O95926 243 aaKnown RBP18.37■□□□□ 0.53
CCDC8-201ENST00000307522 FDPSP14324 419 aaKnown RBP18.37■□□□□ 0.53
CCDC8-201ENST00000307522 RASGRF1Q13972 1273 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 SYNE3Q6ZMZ3 975 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 FOXP4Q8IVH2 680 aaPredicted RBP18.37■□□□□ 0.53
CCDC8-201ENST00000307522 FAM71BQ8TC56 605 aa18.37■□□□□ 0.53
CCDC8-201ENST00000307522 CELF1Q92879 486 aaKnown RBP18.37■□□□□ 0.53
CCDC8-201ENST00000307522 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.37■□□□□ 0.53
CCDC8-201ENST00000307522 CTDSPL2Q05D32 466 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 FMR1Q06787 632 aaKnown RBP eCLIP18.36■□□□□ 0.53
CCDC8-201ENST00000307522 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 CDC23Q9UJX2 597 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 BRD2P25440 801 aaKnown RBP18.36■□□□□ 0.53
CCDC8-201ENST00000307522 GGCXP38435 758 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
CCDC8-201ENST00000307522 HMG20BQ9P0W2 317 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 NFE2L3Q9Y4A8 694 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 KIF5CO60282 957 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 TUBB4AP04350 444 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 BMP6P22004 513 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 NAA16Q6N069 864 aaPredicted RBP18.36■□□□□ 0.53
CCDC8-201ENST00000307522 BCAS4Q8TDM0 211 aa18.36■□□□□ 0.53
CCDC8-201ENST00000307522 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
CCDC8-201ENST00000307522 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
CCDC8-201ENST00000307522 FOXP2O15409 715 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 CBFA2T2O43439 604 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
CCDC8-201ENST00000307522 PCDHA5Q9Y5H7 936 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 DISP2A7MBM2 1401 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 SSBP05455 408 aaKnown RBP eCLIP18.35■□□□□ 0.53
CCDC8-201ENST00000307522 CCDC175P0C221 793 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 EVX2Q03828 476 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 ACTN3Q08043 901 aaPredicted RBP18.35■□□□□ 0.53
CCDC8-201ENST00000307522 OLFM4Q6UX06 510 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 SUGP1Q8IWZ8 645 aaKnown RBP18.35■□□□□ 0.53
CCDC8-201ENST00000307522 C8orf76Q96K31 380 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 DONSONQ9NYP3 566 aa18.35■□□□□ 0.53
CCDC8-201ENST00000307522 CTAGE15A4D2H0 777 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 PFKFB2O60825 505 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CTAGE8P0CG41 777 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CHRNDQ07001 517 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CTAGE6Q86UF2 777 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 VPS37DQ86XT2 251 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CTAGE4Q8IX94 777 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 LRP2BPQ9P2M1 347 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CDC25AP30304 524 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 HSPA1LP34931 641 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 MTMR7Q9Y216 660 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CYP2D7A0A087X1C5 515 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 B4E1Z4 1266 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 IGHMBP2P38935 993 aaKnown RBP18.34■□□□□ 0.53
CCDC8-201ENST00000307522 SDR42E1Q8WUS8 393 aa18.34■□□□□ 0.53
CCDC8-201ENST00000307522 CIAO1O76071 339 aa18.33■□□□□ 0.53
CCDC8-201ENST00000307522 MBD4O95243 580 aa18.33■□□□□ 0.53
CCDC8-201ENST00000307522 SPECC1LQ69YQ0 1117 aa18.33■□□□□ 0.53
CCDC8-201ENST00000307522 FAM107BQ9H098 131 aa18.33■□□□□ 0.53
CCDC8-201ENST00000307522 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.53
CCDC8-201ENST00000307522 MYBL2P10244 700 aa18.33■□□□□ 0.52
CCDC8-201ENST00000307522 GSCP56915 257 aaPredicted RBP18.33■□□□□ 0.52
CCDC8-201ENST00000307522 AIDAQ96BJ3 306 aa18.33■□□□□ 0.52
CCDC8-201ENST00000307522 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 EBAG9O00559 213 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 CASP1P29466 404 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
CCDC8-201ENST00000307522 INPP5BP32019 993 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
CCDC8-201ENST00000307522 CTAGE9A4FU28 777 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 PRDM1O75626 825 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 RBL2Q08999 1139 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 GBP6Q6ZN66 633 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 GPIHBP1Q8IV16 184 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 STX10O60499 249 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 PDE6AP16499 860 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 KCTD19Q17RG1 926 aaPredicted RBP18.32■□□□□ 0.52
CCDC8-201ENST00000307522 BPIFA3Q9BQP9 254 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 ADGRG1Q9Y653 693 aa18.32■□□□□ 0.52
CCDC8-201ENST00000307522 RIC1Q4ADV7 1423 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 SKAP2O75563 359 aaPredicted RBP18.31■□□□□ 0.52
CCDC8-201ENST00000307522 RPAINQ86UA6 219 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
CCDC8-201ENST00000307522 MICU3Q86XE3 530 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 CEP112Q8N8E3 955 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 ZNF213O14771 459 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 NTSR2O95665 410 aa18.31■□□□□ 0.52
CCDC8-201ENST00000307522 ATP1A2P50993 1020 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms