RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 SPATA5Q8NB90 893 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 SMCR8Q8TEV9 937 aaPredicted RBP11.46□□□□□ -0.57
CNOT9-202ENST00000295701 DEFB118Q96PH6 123 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 SNRKQ9NRH2 765 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 RAI14Q9P0K7 980 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
CNOT9-202ENST00000295701 PLXNB2O15031 1838 aa11.46□□□□□ -0.58
CNOT9-202ENST00000295701 ZBTB7BO15156 539 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-202ENST00000295701 ARID4AP29374 1257 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-202ENST00000295701 HMGCS2P54868 508 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 TRIM32Q13049 653 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 MTX1Q13505 466 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 GORABQ5T7V8 394 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 PXYLP1Q8TE99 480 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 SH3RF3Q8TEJ3 882 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-202ENST00000295701 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 OSBPL5Q9H0X9 879 aaPredicted RBP11.45□□□□□ -0.58
CNOT9-202ENST00000295701 PRO3102Q9H379 93 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 LOC285556D6RIA3 1793 aa11.45□□□□□ -0.58
CNOT9-202ENST00000295701 LDHCP07864 332 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 TRIM27P14373 513 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 CAP2P40123 477 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 G3BP1Q13283 466 aaKnown RBP eCLIP11.44□□□□□ -0.58
CNOT9-202ENST00000295701 IRF5Q13568 498 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 ZNF280CQ8ND82 737 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 DIS3LQ8TF46 1054 aaKnown RBP11.44□□□□□ -0.58
CNOT9-202ENST00000295701 ARHGAP45Q92619 1136 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
CNOT9-202ENST00000295701 HTATIP2Q9BUP3 242 aa11.44□□□□□ -0.58
CNOT9-202ENST00000295701 GRXCR2A6NFK2 248 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 GNAI2P04899 355 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 GSTO1P78417 241 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 FAM110CQ1W6H9 321 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
CNOT9-202ENST00000295701 ADGRA1Q86SQ6 560 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 LAPTM4BQ86VI4 370 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
CNOT9-202ENST00000295701 COA7Q96BR5 231 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 PAWRQ96IZ0 340 aaKnown RBP11.43□□□□□ -0.58
CNOT9-202ENST00000295701 ASCC2Q9H1I8 757 aaPredicted RBP11.43□□□□□ -0.58
CNOT9-202ENST00000295701 PAK6Q9NQU5 681 aaPredicted RBP11.43□□□□□ -0.58
CNOT9-202ENST00000295701 AATFQ9NY61 560 aaKnown RBP eCLIP11.43□□□□□ -0.58
CNOT9-202ENST00000295701 LRP2BPQ9P2M1 347 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 GJD2Q9UKL4 321 aa11.43□□□□□ -0.58
CNOT9-202ENST00000295701 MAPKAPK5Q8IW41 473 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 ANKK1Q8NFD2 765 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 TGFBRAP1Q8WUH2 860 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 P2RX7Q99572 595 aaKnown RBP11.42□□□□□ -0.58
CNOT9-202ENST00000295701 DBNDD2Q9BQY9 259 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 DNAJC18Q9H819 358 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 STAP2Q9UGK3 403 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 PNMA3Q9UL41 463 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 NR2E3Q9Y5X4 410 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 FOCADQ5VW36 1801 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
CNOT9-202ENST00000295701 MYH1P12882 1939 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 SOX1O00570 391 aaPredicted RBP11.41□□□□□ -0.58
CNOT9-202ENST00000295701 GDF11O95390 407 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 CYP2E1P05181 493 aaPredicted RBP11.41□□□□□ -0.58
CNOT9-202ENST00000295701 UQCRFS1P1P0C7P4 283 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 DYNLL1P63167 89 aaKnown RBP11.41□□□□□ -0.58
CNOT9-202ENST00000295701 MTMR2Q13614 643 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 SH3D19Q5HYK7 790 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 NAA16Q6N069 864 aaPredicted RBP11.41□□□□□ -0.58
CNOT9-202ENST00000295701 ATF7IPQ6VMQ6 1270 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 TMEM57Q8N5G2 664 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.41□□□□□ -0.58
CNOT9-202ENST00000295701 C1orf115Q9H7X2 142 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 TXNRD2Q9NNW7 524 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 SAP30BPQ9UHR5 308 aaKnown RBP11.41□□□□□ -0.58
CNOT9-202ENST00000295701 PALD1Q9ULE6 856 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 COL6A3P12111 3177 aa11.41□□□□□ -0.58
CNOT9-202ENST00000295701 COL2A1P02458 1487 aaPredicted RBP11.4□□□□□ -0.58
CNOT9-202ENST00000295701 MAP4K4O95819 1239 aaPredicted RBP11.4□□□□□ -0.58
CNOT9-202ENST00000295701 CYP2B6P20813 491 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 ZAP70P43403 619 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 GCLCP48506 637 aaPredicted RBP11.4□□□□□ -0.58
CNOT9-202ENST00000295701 Q3C1V9 767 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 TNNI3KQ59H18 835 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 TTC39AQ5SRH9 613 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 LRCH3Q96II8 777 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 WDR18Q9BV38 432 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 PIH1D3Q9NQM4 214 aaKnown RBP11.4□□□□□ -0.58
CNOT9-202ENST00000295701 PI4KBQ9UBF8 816 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 FPGT-TNNI3KV9GXZ4 949 aa11.4□□□□□ -0.58
CNOT9-202ENST00000295701 IPO8O15397 1037 aaKnown RBP11.39□□□□□ -0.59
CNOT9-202ENST00000295701 BACE1P56817 501 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 PPP4CP60510 307 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 DDX60LQ5H9U9 1706 aaKnown RBP11.39□□□□□ -0.59
CNOT9-202ENST00000295701 NECAB2Q7Z6G3 386 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 TRIB2Q92519 343 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 CCDC8Q9H0W5 538 aaPredicted RBP11.39□□□□□ -0.59
CNOT9-202ENST00000295701 AS3MTQ9HBK9 375 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 TLR7Q9NYK1 1049 aaKnown RBP11.39□□□□□ -0.59
CNOT9-202ENST00000295701 RBPJLQ9UBG7 517 aa11.39□□□□□ -0.59
CNOT9-202ENST00000295701 SEPT9Q9UHD8 586 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms