RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C2CD5Q86YS7 1000 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 CMTR1Q8N1G2 835 aaKnown RBP18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 ERCC5P28715 1186 aaPredicted RBP18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 CLCN6P51797 869 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 RPS6KA1Q15418 735 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 DDB1Q16531 1140 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 VSIG1Q86XK7 387 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 NYXQ9GZU5 481 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 CTTNBP2NLQ9P2B4 639 aa18.28■□□□□ 0.52
SH3RF1-201ENST00000284637 KRT71Q3SY84 523 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 OGFOD1Q8N543 542 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 ODF2LQ9ULJ1 636 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 PCDHA7Q9UN72 937 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 PNMA6AP0CW24 399 aaPredicted RBP18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 GUCY2FP51841 1108 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 LONRF2Q1L5Z9 754 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 FBXO18Q8NFZ0 1043 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 ANKRD2Q9GZV1 360 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 PPANQ9NQ55 473 aaKnown RBP18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 ASIC3Q9UHC3 531 aa18.27■□□□□ 0.52
SH3RF1-201ENST00000284637 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.51
SH3RF1-201ENST00000284637 CFAP157Q5JU67 520 aa18.27■□□□□ 0.51
SH3RF1-201ENST00000284637 ADD1P35611 737 aaKnown RBP18.27■□□□□ 0.51
SH3RF1-201ENST00000284637 FAM169AQ9Y6X4 670 aa18.27■□□□□ 0.51
SH3RF1-201ENST00000284637 CDC25BP30305 580 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 SNCBQ16143 134 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 RASEFQ8IZ41 740 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 UBL4BQ8N7F7 174 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 OR8K1Q8NGG5 319 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 TDRD7Q8NHU6 1098 aaKnown RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 MIPOL1Q8TD10 442 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 AATFQ9NY61 560 aaKnown RBP eCLIP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 SBNO1A3KN83 1393 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 SEC31AO94979 1220 aaKnown RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 HARSP12081 509 aaKnown RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 CCDC84Q86UT8 332 aaPredicted RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 FAM204AQ9H8W3 233 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 SSH2Q76I76 1423 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 ZSCAN20P17040 1043 aaPredicted RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 GOLGA8KD6RF30 607 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 KIF3CO14782 793 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 BACH1O14867 736 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 NDUFA8P51970 172 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 CACTINQ8WUQ7 758 aaKnown RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 ZNF274Q96GC6 653 aaPredicted RBP18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 HINFPQ9BQA5 517 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 RIPOR2Q9Y4F9 1068 aa18.26■□□□□ 0.51
SH3RF1-201ENST00000284637 EIF4A1P60842 406 aaKnown RBP18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 PEX26Q7Z412 305 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 RNF168Q8IYW5 571 aaPredicted RBP18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 SFMBT2Q5VUG0 894 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 CABP7Q86V35 215 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 TBC1D31Q96DN5 1066 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 NAP1L4Q99733 375 aaKnown RBP18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 ADCK5Q3MIX3 580 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 CLIC6Q96NY7 704 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 PTPRTO14522 1441 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 CCDC151A5D8V7 595 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 KCNA6P17658 529 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 HAUS3Q68CZ6 603 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 KIFAP3Q92845 792 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 KIF24Q5T7B8 1368 aa18.25■□□□□ 0.51
SH3RF1-201ENST00000284637 NDC80O14777 642 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 RGS12O14924 1447 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 PFKFB2O60825 505 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 HIBADHP31937 336 aaKnown RBP18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 SLFNL1Q499Z3 407 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 EDC4Q6P2E9 1401 aaKnown RBP18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 FNBP1Q96RU3 617 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 RAB3IL1Q8TBN0 382 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 CCDC51Q96ER9 411 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 PABPN1LA6NDY0 278 aaKnown RBP18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 KCNJ18B7U540 433 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 CALUO43852 315 aaPredicted RBP18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 ZNF131P52739 623 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 KCNJ12Q14500 433 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 NCAPH2Q6IBW4 605 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 MAEAQ7L5Y9 396 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 NOSTRINQ8IVI9 506 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 CSRNP2Q9H175 543 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 CCDC169A6NNP5 214 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 CMA1P23946 247 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 ATP1A2P50993 1020 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 WDR44Q5JSH3 913 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 FYB2Q5VWT5 728 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 UNC5CLQ8IV45 518 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 MAK16Q9BXY0 300 aaKnown RBP18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 ANAPC4Q9UJX5 808 aa18.24■□□□□ 0.51
SH3RF1-201ENST00000284637 PDE8AO60658 829 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 CIB2O75838 187 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 FLOT1O75955 427 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 SPATA5Q8NB90 893 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 HDAC9Q9UKV0 1011 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 KIAA0232Q92628 1395 aa18.23■□□□□ 0.51
SH3RF1-201ENST00000284637 CCDC105Q8IYK2 499 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms