RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ST7Q9NRC1 585 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 KMT5BQ4FZB7 885 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 MFSD14BQ5SR56 506 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 SHC4Q6S5L8 630 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 SARM1Q6SZW1 724 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 OXER1Q8TDS5 423 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 STRBPQ96SI9 672 aaKnown RBP22.4■■□□□ 1.18
CSPG5-201ENST00000264723 RICTORQ6R327 1708 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 SYNRGQ9UMZ2 1314 aa22.4■■□□□ 1.18
CSPG5-201ENST00000264723 ALDH8A1Q9H2A2 487 aaPredicted RBP22.4■■□□□ 1.18
CSPG5-201ENST00000264723 GOLGA8HP0CJ92 632 aa22.39■■□□□ 1.18
CSPG5-201ENST00000264723 CTAGE9A4FU28 777 aa22.39■■□□□ 1.17
CSPG5-201ENST00000264723 PALLDQ8WX93 1383 aa22.39■■□□□ 1.17
CSPG5-201ENST00000264723 ERVV-1B6SEH8 477 aa22.39■■□□□ 1.17
CSPG5-201ENST00000264723 DMTNQ08495 405 aa22.39■■□□□ 1.17
CSPG5-201ENST00000264723 BMP15O95972 392 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 KRT9P35527 623 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 PPARDQ03181 441 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 DTHD1Q6ZMT9 781 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 TCHHQ07283 1943 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CTAGE15A4D2H0 777 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CTAGE8P0CG41 777 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CCZ1BP86790 482 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CCZ1P86791 482 aaPredicted RBP22.38■■□□□ 1.17
CSPG5-201ENST00000264723 TDRD12Q587J7 1177 aaKnown RBP22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CTAGE6Q86UF2 777 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CTAGE4Q8IX94 777 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 RASGRP4Q8TDF6 673 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 SEPT11Q9NVA2 429 aaKnown RBP22.38■■□□□ 1.17
CSPG5-201ENST00000264723 PARP3Q9Y6F1 533 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 DLG5Q8TDM6 1919 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 RBM26Q5T8P6 1007 aaKnown RBP22.38■■□□□ 1.17
CSPG5-201ENST00000264723 CACNA2D4Q7Z3S7 1137 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 VEZTQ9HBM0 779 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 MAN1B1Q9UKM7 699 aa22.38■■□□□ 1.17
CSPG5-201ENST00000264723 SPA17Q15506 151 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 RRP36Q96EU6 259 aaKnown RBP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 RBM17Q96I25 401 aaKnown RBP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 VPS18Q9P253 973 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 CT47A1Q5JQC4 288 aaPredicted RBP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 E4F1Q66K89 784 aaPredicted RBP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 ENGASEQ8NFI3 743 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 SYMPKQ92797 1274 aaKnown RBP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 GPKOWQ92917 476 aaPredicted RBP eCLIP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 PSMB7Q99436 277 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 CRACR2AQ9BSW2 395 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 SRRTQ9BXP5 876 aaKnown RBP22.37■■□□□ 1.17
CSPG5-201ENST00000264723 C6orf50Q9HD87 102 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 ZNF804BA4D1E1 1349 aa22.37■■□□□ 1.17
CSPG5-201ENST00000264723 FAM170AA1A519 330 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 PRR29P0C7W0 189 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 USP49Q70CQ1 688 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 PLCG2P16885 1265 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 PTGDRQ13258 359 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 DIXDC1Q155Q3 683 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 ZFYVE27Q5T4F4 411 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 TCERG1LQ5VWI1 586 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 CWC15Q9P013 229 aaKnown RBP22.36■■□□□ 1.17
CSPG5-201ENST00000264723 COL15A1P39059 1388 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 PARP1P09874 1014 aaKnown RBP22.36■■□□□ 1.17
CSPG5-201ENST00000264723 UBE4AQ14139 1066 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 DOK7Q18PE1 504 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 CTAGE1Q96RT6 745 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 ZSCAN10Q96SZ4 725 aaPredicted RBP22.36■■□□□ 1.17
CSPG5-201ENST00000264723 EXOC1Q9NV70 894 aa22.36■■□□□ 1.17
CSPG5-201ENST00000264723 RBM28Q9NW13 759 aaKnown RBP22.36■■□□□ 1.17
CSPG5-201ENST00000264723 TRIM37O94972 964 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 SCNN1DP51172 638 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 CHMP4BP1P59074 171 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 ARID5AQ03989 594 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 GRIN1Q05586 938 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
CSPG5-201ENST00000264723 IRX2Q9BZI1 471 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-201ENST00000264723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.35■■□□□ 1.17
CSPG5-201ENST00000264723 MACROD2A1Z1Q3 448 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 SOWAHDA6NJG2 315 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 MMRN2Q9H8L6 949 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 FAM205CA6NFA0 338 aa22.35■■□□□ 1.17
CSPG5-201ENST00000264723 MYO1BO43795 1136 aa22.34■■□□□ 1.17
CSPG5-201ENST00000264723 CLCN6P51797 869 aa22.34■■□□□ 1.17
CSPG5-201ENST00000264723 NEK11Q8NG66 645 aa22.34■■□□□ 1.17
CSPG5-201ENST00000264723 CALCOCO1Q9P1Z2 691 aa22.34■■□□□ 1.17
CSPG5-201ENST00000264723 HPS5Q9UPZ3 1129 aa22.34■■□□□ 1.17
CSPG5-201ENST00000264723 PSDA5PKW4 1024 aaPredicted RBP22.34■■□□□ 1.17
CSPG5-201ENST00000264723 PPP6R2O75170 966 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 CASP14P31944 242 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 AMPD3Q01432 767 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 CCDC40Q4G0X9 1142 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 DPP8Q6V1X1 898 aaPredicted RBP22.33■■□□□ 1.17
CSPG5-201ENST00000264723 TIGD1Q96MW7 591 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 RABEP2Q9H5N1 569 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 LUC7L2Q9Y383 392 aaKnown RBP22.33■■□□□ 1.17
CSPG5-201ENST00000264723 AKR1B10O60218 316 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 MMP1P03956 469 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 CUL5Q93034 780 aa22.33■■□□□ 1.17
CSPG5-201ENST00000264723 MROH7-TTC4A0A0A0MT08 1334 aa22.33■■□□□ 1.16
CSPG5-201ENST00000264723 UBN2Q6ZU65 1347 aa22.33■■□□□ 1.16
CSPG5-201ENST00000264723 PLEKHA4Q9H4M7 779 aa22.33■■□□□ 1.16
CSPG5-201ENST00000264723 PSMA7O14818 248 aa22.32■■□□□ 1.16
CSPG5-201ENST00000264723 GYS2P54840 703 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms