RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TESPA1A2RU30 521 aaPredicted RBP15.45■□□□□ 0.06
SLIRP-201ENST00000238688 STX6O43752 255 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 ORC4O43929 436 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 CDKL5O76039 1030 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 HAND2P61296 217 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 CPLX2Q6PUV4 134 aaKnown RBP15.45■□□□□ 0.06
SLIRP-201ENST00000238688 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
SLIRP-201ENST00000238688 CTU1Q7Z7A3 348 aaKnown RBP15.45■□□□□ 0.06
SLIRP-201ENST00000238688 ADGRA1Q86SQ6 560 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 TBC1D10CQ8IV04 446 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 CCDC83Q8IWF9 413 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 MIGA1Q8NAN2 632 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 MS4A4AQ96JQ5 239 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 NBPF3Q9H094 633 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
SLIRP-201ENST00000238688 ERICH2A1L162 156 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 GJB2P29033 226 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 INHBEP58166 350 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 MAP3K9P80192 1104 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 PDE4BQ07343 736 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 NFIAQ12857 509 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 VGLL4Q14135 290 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 DCP1AQ9NPI6 582 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-201ENST00000238688 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 MYH1P12882 1939 aa15.44■□□□□ 0.06
SLIRP-201ENST00000238688 SH2B2O14492 632 aaPredicted RBP15.43■□□□□ 0.06
SLIRP-201ENST00000238688 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
SLIRP-201ENST00000238688 LARGE1O95461 756 aa15.43■□□□□ 0.06
SLIRP-201ENST00000238688 ZSCAN22P10073 491 aaPredicted RBP15.43■□□□□ 0.06
SLIRP-201ENST00000238688 PDIA3P30101 505 aaKnown RBP15.43■□□□□ 0.06
SLIRP-201ENST00000238688 NBR1Q14596 966 aa15.43■□□□□ 0.06
SLIRP-201ENST00000238688 OPTNQ96CV9 577 aa15.43■□□□□ 0.06
SLIRP-201ENST00000238688 FAM198AQ9UFP1 575 aa15.43■□□□□ 0.06
SLIRP-201ENST00000238688 SNCAIPQ9Y6H5 919 aa15.43■□□□□ 0.06
SLIRP-201ENST00000238688 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 ALDH1A1P00352 501 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 SYT1P21579 422 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 ANTXR2P58335 489 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 SYNE3Q6ZMZ3 975 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 IQCA1Q86XH1 822 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 ZFPM1Q8IX07 1006 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 FAM151AQ8WW52 585 aa15.42■□□□□ 0.06
SLIRP-201ENST00000238688 AATFQ9NY61 560 aaKnown RBP eCLIP15.42■□□□□ 0.06
SLIRP-201ENST00000238688 PRKAB2O43741 272 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
SLIRP-201ENST00000238688 CAP1Q01518 475 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 BRI3BPQ8WY22 251 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 TMOD2Q9NZR1 351 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 ZDHHC9Q9Y397 364 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 TCHHQ07283 1943 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 NEDD4P46934 1319 aa15.41■□□□□ 0.06
SLIRP-201ENST00000238688 ATRNL1Q5VV63 1379 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 SPDYE5A6NIY4 337 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 B4E1Z4 1266 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 FKTNO75072 461 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 CALM1P0DP23 149 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 CALM2P0DP24 149 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 CALM3P0DP25 149 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 USP5P45974 858 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 APOBRQ0VD83 1088 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 ST3GAL1Q11201 340 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 SCRN1Q12765 414 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 LARP1BQ659C4 914 aaKnown RBP15.4■□□□□ 0.06
SLIRP-201ENST00000238688 ATL3Q6DD88 541 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 IGDCC4Q8TDY8 1250 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 SDR42E1Q8WUS8 393 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 ZKSCAN4Q969J2 545 aaPredicted RBP15.4■□□□□ 0.06
SLIRP-201ENST00000238688 TCEANC2Q96MN5 208 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 ZSCAN16Q9H4T2 348 aaPredicted RBP15.4■□□□□ 0.06
SLIRP-201ENST00000238688 USP40Q9NVE5 1235 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.4■□□□□ 0.06
SLIRP-201ENST00000238688 MYH8P13535 1937 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 MYH15Q9Y2K3 1946 aa15.4■□□□□ 0.06
SLIRP-201ENST00000238688 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 KLF18A0A0U1RQI7 1052 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 GOLGA8BA8MQT2 603 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 CPLX1O14810 134 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 KDM4AO75164 1064 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 F13A1P00488 732 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 INPP5BP32019 993 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 DYNLL1P63167 89 aaKnown RBP15.39■□□□□ 0.05
SLIRP-201ENST00000238688 TCP10Q12799 353 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 CRHR2Q13324 411 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 TMEM67Q5HYA8 995 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 C12orf60Q5U649 245 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 APOA5Q6Q788 366 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 MIGA2Q7L4E1 593 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 SH3BP5LQ7L8J4 393 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 NECAB1Q8N987 351 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 FAM184AQ8NB25 1140 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 TMEM87AQ8NBN3 555 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 NSUN7Q8NE18 718 aaKnown RBP15.39■□□□□ 0.05
SLIRP-201ENST00000238688 WRNIP1Q96S55 665 aa15.39■□□□□ 0.05
SLIRP-201ENST00000238688 LY9Q9HBG7 655 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 481.9 ms