RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 EVCP57679 992 aa18.91■□□□□ 0.62
PTK7-202ENST00000230419 PTGDRQ13258 359 aa18.91■□□□□ 0.62
PTK7-202ENST00000230419 EIF3JO75822 258 aaKnown RBP18.91■□□□□ 0.62
PTK7-202ENST00000230419 NOP2P46087 812 aaKnown RBP18.91■□□□□ 0.62
PTK7-202ENST00000230419 CCDC144BQ3MJ40 725 aa18.91■□□□□ 0.62
PTK7-202ENST00000230419 KIAA0825Q8IV33 1275 aa18.91■□□□□ 0.62
PTK7-202ENST00000230419 PDLIM2Q96JY6 352 aa18.91■□□□□ 0.62
PTK7-202ENST00000230419 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
PTK7-202ENST00000230419 ZNF804BA4D1E1 1349 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 ITPK1Q13572 414 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 KRT222Q8N1A0 295 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 PNMA1Q8ND90 353 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 PSMB7Q99436 277 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 LUC7LQ9NQ29 371 aaKnown RBP18.9■□□□□ 0.62
PTK7-202ENST00000230419 RBM28Q9NW13 759 aaKnown RBP18.9■□□□□ 0.62
PTK7-202ENST00000230419 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTK7-202ENST00000230419 NCAPD2Q15021 1401 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.9■□□□□ 0.62
PTK7-202ENST00000230419 PDE4DQ08499 809 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 MARCH10Q8NA82 808 aaPredicted RBP18.9■□□□□ 0.62
PTK7-202ENST00000230419 CTAGE1Q96RT6 745 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 GGA1Q9UJY5 639 aa18.9■□□□□ 0.62
PTK7-202ENST00000230419 MACROD2A1Z1Q3 448 aa18.89■□□□□ 0.62
PTK7-202ENST00000230419 MECOMQ03112 1051 aa18.89■□□□□ 0.62
PTK7-202ENST00000230419 MB21D2Q8IYB1 491 aaPredicted RBP18.89■□□□□ 0.62
PTK7-202ENST00000230419 MED23Q9ULK4 1368 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 BMS1Q14692 1282 aaKnown RBP18.89■□□□□ 0.61
PTK7-202ENST00000230419 FCHSD1Q86WN1 690 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 SAMM50Q9Y512 469 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 CACNB3P54284 484 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 ANTXR2P58335 489 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 TMEM132AQ24JP5 1023 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 NEURL4Q96JN8 1562 aa18.89■□□□□ 0.61
PTK7-202ENST00000230419 FDPSP14324 419 aaKnown RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 KLRK1P26718 216 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 KRT9P35527 623 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 LMAN1P49257 510 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 PLS1Q14651 629 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 MLKLQ8NB16 471 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 ARFGAP3Q9NP61 516 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 LUC7L2Q9Y383 392 aaKnown RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 GOLGA6L9A6NEM1 432 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 GSG1L2A8MUP6 293 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 WWC2Q6AWC2 1192 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 SLF1Q9BQI6 1058 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTK7-202ENST00000230419 TMCO5BA8MYB1 307 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 USO1O60763 962 aaKnown RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 SPAG1Q07617 926 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 FNBP4Q8N3X1 1017 aaPredicted RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 SYMPKQ92797 1274 aaKnown RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 MINPP1Q9UNW1 487 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 TBC1D8BQ0IIM8 1120 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 KRT79Q5XKE5 535 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 UBE2Q2Q8WVN8 375 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 TAF4BQ92750 862 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 POLR3EQ9NVU0 708 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
PTK7-202ENST00000230419 USP42Q9H9J4 1324 aaKnown RBP18.88■□□□□ 0.61
PTK7-202ENST00000230419 EXOSC10Q01780 885 aaKnown RBP18.87■□□□□ 0.61
PTK7-202ENST00000230419 FAM196BA6NMK8 535 aa18.87■□□□□ 0.61
PTK7-202ENST00000230419 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
PTK7-202ENST00000230419 PRPF4BQ13523 1007 aaKnown RBP18.87■□□□□ 0.61
PTK7-202ENST00000230419 USH1GQ495M9 461 aa18.87■□□□□ 0.61
PTK7-202ENST00000230419 PLEKHA4Q9H4M7 779 aa18.87■□□□□ 0.61
PTK7-202ENST00000230419 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
PTK7-202ENST00000230419 USP17L2Q6R6M4 530 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 USP49Q70CQ1 688 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CSGALNACT2Q8N6G5 542 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 SAMSN1Q9NSI8 373 aaKnown RBP18.86■□□□□ 0.61
PTK7-202ENST00000230419 GNA11P29992 359 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CCDC42Q96M95 316 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 EYA3Q99504 573 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CTAGE15A4D2H0 777 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CTAGE9A4FU28 777 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CTAGE8P0CG41 777 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 RNASE9P60153 205 aaKnown RBP18.86■□□□□ 0.61
PTK7-202ENST00000230419 CTAGE6Q86UF2 777 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CTAGE4Q8IX94 777 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 GDAP1L1Q96MZ0 367 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 SPAG5Q96R06 1193 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 TTF2Q9UNY4 1162 aaKnown RBP18.86■□□□□ 0.61
PTK7-202ENST00000230419 A0A1W2PQ27 194 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 A0A1W2PQ64 194 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 A0A1W2PQD8 194 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 CUL5Q93034 780 aa18.86■□□□□ 0.61
PTK7-202ENST00000230419 AP5Z1O43299 807 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 BTDP43251 543 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 USP27XA6NNY8 438 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 SLC16A2P36021 539 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 SPECC1LQ69YQ0 1117 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 WDR66Q8TBY9 1149 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 CDCA7Q9BWT1 371 aaPredicted RBP18.85■□□□□ 0.61
PTK7-202ENST00000230419 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
PTK7-202ENST00000230419 PAFAH1B1P43034 410 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms