RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 NCOA7Q8NI08 942 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 SERTAD1Q9UHV2 236 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 C4AP0C0L4 1744 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 SBF2Q86WG5 1849 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 ONECUT3O60422 494 aaPredicted RBP20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 TIMM10P62072 90 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 AMPD2Q01433 879 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 FAM107BQ9H098 131 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 BTAF1O14981 1849 aa20.03■□□□□ 0.8
CDKN1B-201ENST00000228872 KIF6Q6ZMV9 814 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 RALYLQ86SE5 291 aaKnown RBP20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 TRPC5Q9UL62 973 aaPredicted RBP20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 HPCAL4Q9UM19 191 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 NUP98P52948 1817 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 IFIT1P09914 478 aaKnown RBP20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 FECHP22830 423 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 NCAPH2Q6IBW4 605 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 GRAMD1CQ8IYS0 662 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 CWC25Q9NXE8 425 aaPredicted RBP20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 MYO6Q9UM54 1294 aa20.02■□□□□ 0.8
CDKN1B-201ENST00000228872 ZC3H4Q9UPT8 1303 aaKnown RBP20.02■□□□□ 0.79
CDKN1B-201ENST00000228872 FGAP02671 866 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 ERCC5P28715 1186 aaPredicted RBP20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 IL6STP40189 918 aaPredicted RBP20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 ARHGAP25P42331 645 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 LMBR1LQ6UX01 489 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 GPATCH11Q8N954 259 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 CCDC148Q8NFR7 591 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 CDHR2Q9BYE9 1310 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 LOC102724428A0A0B4J2F2 783 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 H7C1W4 665 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 POLR2DO15514 142 aaKnown RBP20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 KCNQ2O43526 872 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 CASP14P31944 242 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 SIK1P57059 783 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 ATG9AQ7Z3C6 839 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 CEP89Q96ST8 783 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 ISCA1Q9BUE6 129 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 MYO1AQ9UBC5 1043 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 WDR19Q8NEZ3 1342 aa20.01■□□□□ 0.79
CDKN1B-201ENST00000228872 MMP14P50281 582 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 GRIN1Q05586 938 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 CCDC91Q7Z6B0 441 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 ADD3Q9UEY8 706 aaKnown RBP20■□□□□ 0.79
CDKN1B-201ENST00000228872 ZBTB1Q9Y2K1 713 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 MYH14Q7Z406 1995 aaKnown RBP20■□□□□ 0.79
CDKN1B-201ENST00000228872 SHOX2O60902 331 aaPredicted RBP20■□□□□ 0.79
CDKN1B-201ENST00000228872 CDKL5O76039 1030 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 METAP2P50579 478 aaKnown RBP eCLIP20■□□□□ 0.79
CDKN1B-201ENST00000228872 USP14P54578 494 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 FOXO4P98177 505 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 AKAP17AQ02040 695 aaKnown RBP20■□□□□ 0.79
CDKN1B-201ENST00000228872 TRDNQ13061 729 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 TCIRG1Q13488 830 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 SKIDA1Q1XH10 827 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 CNGA4Q8IV77 575 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 KAT2BQ92831 832 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 PHKBQ93100 1093 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 CCDC51Q96ER9 411 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 GPR108Q9NPR9 543 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 SEC31BQ9NQW1 1179 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 WWC3Q9ULE0 1092 aa20■□□□□ 0.79
CDKN1B-201ENST00000228872 A0A0G2JS52 829 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 ATP6V1AP38606 617 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 TRIM28Q13263 835 aaKnown RBP19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 ERLIN2O94905 339 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 GYPCP04921 128 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 FXR1P51114 621 aaKnown RBP eCLIP19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 ERVK-24P63145 666 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 RIN2Q8WYP3 895 aaPredicted RBP19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 ZNF330Q9Y3S2 320 aaPredicted RBP19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 DDX60Q8IY21 1712 aaKnown RBP19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 RXRAP19793 462 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 MAP9Q49MG5 647 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 SPATA1Q5VX52 437 aa19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 FBXO2Q9UK22 296 aaPredicted RBP19.99■□□□□ 0.79
CDKN1B-201ENST00000228872 STIM1Q13586 685 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 WASHC4Q2M389 1173 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 TMTC1Q8IUR5 882 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 PTPREP23469 700 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 LIG3P49916 1009 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 GSCP56915 257 aaPredicted RBP19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 TRIM29Q14134 588 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 INTS5Q6P9B9 1019 aaKnown RBP19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 GIGYF2Q6Y7W6 1299 aaKnown RBP19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 SPATA20Q8TB22 786 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 COG1Q8WTW3 980 aa19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 RNF216Q9NWF9 866 aaPredicted RBP19.98■□□□□ 0.79
CDKN1B-201ENST00000228872 ACTN4O43707 911 aaKnown RBP19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 MCM3P25205 808 aa19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 CCDC87Q9NVE4 849 aa19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 ANGEL1Q9UNK9 670 aaKnown RBP19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 CCT5P48643 541 aa19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 ITPK1Q13572 414 aa19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 CPLX2Q6PUV4 134 aaKnown RBP19.97■□□□□ 0.79
CDKN1B-201ENST00000228872 ERVV-1B6SEH8 477 aa19.96■□□□□ 0.79
CDKN1B-201ENST00000228872 ZNF213O14771 459 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms