RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.97■■■□□ 2.07
HOMER3-201ENST00000221222 SAGE1Q9NXZ1 904 aa27.97■■■□□ 2.07
HOMER3-201ENST00000221222 KCNH4Q9UQ05 1017 aa27.97■■■□□ 2.07
HOMER3-201ENST00000221222 SLC27A2O14975 620 aa27.96■■■□□ 2.07
HOMER3-201ENST00000221222 SEPT2Q15019 361 aa27.96■■■□□ 2.07
HOMER3-201ENST00000221222 RAB3GAP1Q15042 981 aa27.96■■■□□ 2.07
HOMER3-201ENST00000221222 CREB3L3Q68CJ9 461 aa27.96■■■□□ 2.07
HOMER3-201ENST00000221222 CCDC84Q86UT8 332 aaPredicted RBP27.96■■■□□ 2.07
HOMER3-201ENST00000221222 AS3MTQ9HBK9 375 aa27.96■■■□□ 2.07
HOMER3-201ENST00000221222 NEDD4P46934 1319 aa27.96■■■□□ 2.07
HOMER3-201ENST00000221222 NEDD1Q8NHV4 660 aa27.95■■■□□ 2.06
HOMER3-201ENST00000221222 CNNM2Q9H8M5 875 aa27.95■■■□□ 2.06
HOMER3-201ENST00000221222 TOMM22Q9NS69 142 aa27.95■■■□□ 2.06
HOMER3-201ENST00000221222 IGKV6D-41A0A0C4DH26 115 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 CXCL11O14625 94 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 TSPY3P0CV98 308 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 TSPY8P0CW00 308 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 TFAP4Q01664 338 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 FAM47AQ5JRC9 791 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 RNF20Q5VTR2 975 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 ZNF280CQ8ND82 737 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 USP26Q9BXU7 913 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 TAF6LQ9Y6J9 622 aa27.94■■■□□ 2.06
HOMER3-201ENST00000221222 TSPY2A6NKD2 308 aa27.93■■■□□ 2.06
HOMER3-201ENST00000221222 RANBP6O60518 1105 aaKnown RBP27.93■■■□□ 2.06
HOMER3-201ENST00000221222 RRP12Q5JTH9 1297 aaKnown RBP27.93■■■□□ 2.06
HOMER3-201ENST00000221222 ESR2Q92731 530 aa27.93■■■□□ 2.06
HOMER3-201ENST00000221222 KRT23Q9C075 422 aa27.93■■■□□ 2.06
HOMER3-201ENST00000221222 KANSL2Q9H9L4 492 aa27.93■■■□□ 2.06
HOMER3-201ENST00000221222 E7EWF7 191 aa27.92■■■□□ 2.06
HOMER3-201ENST00000221222 HSPA4P34932 840 aa27.92■■■□□ 2.06
HOMER3-201ENST00000221222 GTF2A2P52657 109 aa27.92■■■□□ 2.06
HOMER3-201ENST00000221222 SNAPC2Q13487 334 aa27.92■■■□□ 2.06
HOMER3-201ENST00000221222 KCNB2Q92953 911 aa27.92■■■□□ 2.06
HOMER3-201ENST00000221222 MS4A4AQ96JQ5 239 aa27.92■■■□□ 2.06
HOMER3-201ENST00000221222 MANSC4A6NHS7 340 aaPredicted RBP27.91■■■□□ 2.06
HOMER3-201ENST00000221222 SPP2Q13103 211 aa27.91■■■□□ 2.06
HOMER3-201ENST00000221222 TSGA10IPQ3SY00 556 aa27.91■■■□□ 2.06
HOMER3-201ENST00000221222 STOX1Q6ZVD7 989 aa27.91■■■□□ 2.06
HOMER3-201ENST00000221222 NKX2-3Q8TAU0 364 aa27.91■■■□□ 2.06
HOMER3-201ENST00000221222 TRIM75PA6NK02 468 aa27.9■■■□□ 2.06
HOMER3-201ENST00000221222 ICA1Q05084 483 aa27.9■■■□□ 2.06
HOMER3-201ENST00000221222 SIAH1Q8IUQ4 282 aa27.9■■■□□ 2.06
HOMER3-201ENST00000221222 MYH4Q9Y623 1939 aa27.9■■■□□ 2.06
HOMER3-201ENST00000221222 LOC285556D6RIA3 1793 aa27.9■■■□□ 2.06
HOMER3-201ENST00000221222 A0A0G2JLL6 359 aaPredicted RBP27.89■■■□□ 2.06
HOMER3-201ENST00000221222 TESPA1A2RU30 521 aaPredicted RBP27.89■■■□□ 2.06
HOMER3-201ENST00000221222 B4E1Z4 1266 aa27.89■■■□□ 2.06
HOMER3-201ENST00000221222 INHBEP58166 350 aa27.89■■■□□ 2.06
HOMER3-201ENST00000221222 TRDNQ13061 729 aa27.89■■■□□ 2.06
HOMER3-201ENST00000221222 PRRT2Q7Z6L0 340 aaPredicted RBP27.89■■■□□ 2.06
HOMER3-201ENST00000221222 CLEC10AQ8IUN9 316 aa27.89■■■□□ 2.06
HOMER3-201ENST00000221222 REM2Q8IYK8 340 aaPredicted RBP27.89■■■□□ 2.06
HOMER3-201ENST00000221222 TCP11L1Q9NUJ3 509 aa27.89■■■□□ 2.06
HOMER3-201ENST00000221222 MTMR4Q9NYA4 1195 aa27.89■■■□□ 2.06
HOMER3-201ENST00000221222 USP17L10C9JJH3 530 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 KDM4AO75164 1064 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 SEC24BO95487 1268 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 ZKSCAN1P17029 563 aaPredicted RBP27.88■■■□□ 2.05
HOMER3-201ENST00000221222 BACE1P56817 501 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 SH3D19Q5HYK7 790 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 RASEFQ8IZ41 740 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 NCOA7Q8NI08 942 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 CEP95Q96GE4 821 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 IL17RBQ9NRM6 502 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 NYAP2Q9P242 653 aa27.88■■■□□ 2.05
HOMER3-201ENST00000221222 C19orf81C9J6K1 198 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 CETPP11597 493 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 EEF2P13639 858 aaKnown RBP27.87■■■□□ 2.05
HOMER3-201ENST00000221222 SREBF2Q12772 1141 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 PPP4R3BQ5MIZ7 849 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 ACER1Q8TDN7 264 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 KIAA1683Q9H0B3 1180 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 ARHGEF10LQ9HCE6 1279 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 ZSWIM5Q9P217 1185 aa27.87■■■□□ 2.05
HOMER3-201ENST00000221222 A0A1W2PRG0 241 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 TM4SF4P48230 202 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 NOVP48745 357 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 MTMR2Q13614 643 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 MOGSQ13724 837 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 TMX2Q9Y320 296 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 CCL15-CCL14A0A0B4J2E2 113 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 TBC1D8O95759 1140 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 CCL15Q16663 113 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 RALYLQ86SE5 291 aaKnown RBP27.86■■■□□ 2.05
HOMER3-201ENST00000221222 BRI3BPQ8WY22 251 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 FEZ1Q99689 392 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 SH2D4AQ9H788 454 aa27.86■■■□□ 2.05
HOMER3-201ENST00000221222 NMT2O60551 498 aa27.85■■■□□ 2.05
HOMER3-201ENST00000221222 TTLL1O95922 423 aa27.85■■■□□ 2.05
HOMER3-201ENST00000221222 KRT32Q14532 448 aa27.85■■■□□ 2.05
HOMER3-201ENST00000221222 IQCA1Q86XH1 822 aa27.85■■■□□ 2.05
HOMER3-201ENST00000221222 MB21D2Q8IYB1 491 aaPredicted RBP27.85■■■□□ 2.05
HOMER3-201ENST00000221222 MKL1Q969V6 931 aa27.85■■■□□ 2.05
HOMER3-201ENST00000221222 SYNPO2Q9UMS6 1093 aa27.85■■■□□ 2.05
HOMER3-201ENST00000221222 MCCP23508 829 aa27.84■■■□□ 2.05
HOMER3-201ENST00000221222 USP14P54578 494 aa27.84■■■□□ 2.05
HOMER3-201ENST00000221222 HMGCS2P54868 508 aa27.84■■■□□ 2.05
HOMER3-201ENST00000221222 FASTKD5Q7L8L6 764 aaKnown RBP27.84■■■□□ 2.05
HOMER3-201ENST00000221222 PROCA1Q8NCQ7 364 aaPredicted RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms