RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 S100BP04271 92 aaPredicted RBP16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 HAUS1Q96CS2 278 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 GOLGA8QA0A0J9YX86 632 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 GOLGA8OA6NCC3 632 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 GOLGA8NF8WBI6 632 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 BRAPQ7Z569 592 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 FGD6Q6ZV73 1430 aa16.1■□□□□ 0.17
SPTLC2-201ENST00000216484 WDR97A6NE52 1622 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 LONRF2Q1L5Z9 754 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 SART1O43290 800 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 SND1Q7KZF4 910 aaKnown RBP eCLIP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 ST7Q9NRC1 585 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 H3BRJ5 948 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 CAPN9O14815 690 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 SUCLA2Q9P2R7 463 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 PI4KAP2A4QPH2 592 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 GNAT2P19087 354 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 BLVRAP53004 296 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 BRDTQ58F21 947 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 SCYL3Q8IZE3 742 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 PI4KAP1Q8N8J0 262 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 ARHGEF35A5YM69 484 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
SPTLC2-201ENST00000216484 MIGA1Q8NAN2 632 aa16.08■□□□□ 0.17
SPTLC2-201ENST00000216484 OCM2P0CE71 109 aa16.08■□□□□ 0.17
SPTLC2-201ENST00000216484 OCMP0CE72 109 aaPredicted RBP16.08■□□□□ 0.17
SPTLC2-201ENST00000216484 PPP1R2P41236 205 aa16.08■□□□□ 0.17
SPTLC2-201ENST00000216484 DAB2P98082 770 aa16.08■□□□□ 0.17
SPTLC2-201ENST00000216484 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.17
SPTLC2-201ENST00000216484 EXOC5O00471 708 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 TRIM55Q9BYV6 548 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 POLKQ9UBT6 870 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 P4HA1P13674 534 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 CD19P15391 556 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 ADCY8P40145 1251 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 ACBD5Q5T8D3 534 aaPredicted RBP16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 KAZNQ674X7 775 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 RIC8AQ9NPQ8 531 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 PLCD1P51178 756 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 LMNB1P20700 586 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 IQCB1Q15051 598 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 M0QZ92 97 aa16.08■□□□□ 0.16
SPTLC2-201ENST00000216484 PIK3R4Q99570 1358 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 IFRD2Q12894 506 aaPredicted RBP16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 ACRBPQ8NEB7 543 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 HOMER3Q9NSC5 361 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 MYCLP12524 364 aaPredicted RBP16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 ARHGDIAP52565 204 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 SNX1Q13596 522 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 FCHSD1Q86WN1 690 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 LRRC8CQ8TDW0 803 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 ANGPTL3Q9Y5C1 460 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 EEF1GP26641 437 aaKnown RBP16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 PAK1Q13153 545 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 C16orf87Q6PH81 154 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 ZSCAN32Q9NX65 697 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 TSKSQ9UJT2 592 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 AMFRQ9UKV5 643 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 JAG2Q9Y219 1238 aa16.07■□□□□ 0.16
SPTLC2-201ENST00000216484 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 MAIP1Q8WWC4 291 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 UIMC1Q96RL1 719 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 IFIH1Q9BYX4 1025 aaKnown RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 TNNI1P19237 187 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 LMNB2Q03252 620 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 TTC19Q6DKK2 380 aaPredicted RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 FLOT2Q14254 428 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 SAP30BPQ9UHR5 308 aaKnown RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 ARHGEF9O43307 516 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 PLCG2P16885 1265 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 PCYT1AP49585 367 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 CCDC85BQ15834 202 aaPredicted RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 MYLK4Q86YV6 388 aaPredicted RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 PAWRQ96IZ0 340 aaKnown RBP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 NEUROG2Q9H2A3 272 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 PTPDC1A2A3K4 754 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 GNGT1P63211 74 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 SFMBT2Q5VUG0 894 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
SPTLC2-201ENST00000216484 GOLGA8CPA6NN73 597 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 STAM2O75886 525 aa16.05■□□□□ 0.16
SPTLC2-201ENST00000216484 HLA-DPA1P20036 260 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms