RNA–Protein interactions for RNA: ENSMUST00000034981.13

Xrn1-201, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Xrn1, Length 5,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-201ENSMUST00000034981 Kif1bpQ6ZPU9 617 aa7.46□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Apobec3Q99J72 440 aaKnown RBP7.46□□□□□ -1.22
Xrn1-201ENSMUST00000034981 NsmfQ99NF2 532 aa7.46□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Dbndd1Q9CZ00 160 aa7.46□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Sgpp1Q9JI99 430 aa7.46□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Chaf1aQ9QWF0 911 aa7.46□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Lrp6O88572 1613 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Myh3P13541 1940 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Gm13023A2A8N2 498 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ess2O70279 479 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Mcm6P97311 821 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Atp1b3P97370 278 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Gm5592Q3V0A6 857 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Wdr3Q8BHB4 942 aaKnown RBP7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Q8BT18 775 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Letm1Q9Z2I0 738 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 CluhQ5SW19 1315 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Npy5rO70342 466 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Rad23bP54728 416 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Myo19Q5SV80 963 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Mrps31Q61733 384 aaKnown RBP7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Maats1Q8BRC6 783 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tktl2Q9D4D4 627 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Gpaa1Q9WTK3 621 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Prr29B1ARI9 187 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Psmb7P70195 277 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tcp11l2Q8K1H7 517 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 McamQ8R2Y2 648 aaKnown RBP7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Pla2g12bQ99P27 195 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Casz1Q9CWL2 1761 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Adgra3Q7TT36 1310 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ppef2O35385 757 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 DSCC1Q14AI0 399 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Q66JV7 365 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Pcdha12Q91Y18 950 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 LpxnQ99N69 386 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Mis18aQ9CZJ6 204 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Klhl40Q9D783 621 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Zranb2Q9R020 330 aaKnown RBP7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Scgb2b18A0A087WPA9 112 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Aak1Q3UHJ0 959 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ccp110Q7TSH4 1004 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tmco3Q8BH01 678 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Stn1Q8K2X3 378 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Trim29Q8R2Q0 587 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Dpf1Q9QX66 387 aa7.45□□□□□ -1.22
Xrn1-201ENSMUST00000034981 A0A1W2P7S8 802 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Cdh15P33146 784 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Cdc5lQ6A068 802 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Q8CEZ4 452 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Nat10Q8K224 1024 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 NesQ6P5H2 1864 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Cyp26c1B2RXA7 518 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Api5O35841 504 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 MarcksP26645 309 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Traf1P39428 409 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Pbx1P41778 430 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Smarcc1P97496 1104 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Olfr121Q5CZY0 321 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Spata32Q8C5V0 334 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 IkbkbO88351 757 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Pola2P33611 600 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ptpn12P35831 775 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Adck5Q80V03 582 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 E2f4Q8R0K9 410 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ccdc12Q8R344 166 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Pcdha7Q91Y13 937 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Krtap5-3Q9D226 196 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Cfap45Q9D9U9 551 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Gm36210A0A1B0GS00 229 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 A0A1L1SQF0 893 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 MeiocA2AG06 965 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tbc1d2B1AVH7 922 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Calm1P0DP26 149 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Calm2P0DP27 149 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Calm3P0DP28 149 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Mars2Q499X9 586 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tekt3Q6X6Z7 490 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Srp68Q8BMA6 625 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Hexim1Q8R409 356 aaKnown RBP7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Sipa1l3G3X9J0 1776 aa7.44□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Lrp5Q91VN0 1614 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Zhx1P70121 873 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Rbm12b2Q66JV4 834 aaKnown RBP7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ulbp1Q8HWA3 334 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Stag2O35638 1231 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Krt86P97861 486 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Traf3ip1Q149C2 625 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Lrrc43Q3V0L5 667 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 HlfQ8BW74 295 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Apol10aQ8CCA5 318 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tmem60Q8K174 133 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Tmx1Q8VBT0 278 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 RarsQ9D0I9 660 aaKnown RBP7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 PappaQ8R4K8 1624 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Lcmt1A0A0U1RNF2 332 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Palm3A2TJV2 734 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ugt1a8D3Z748 530 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Ugt1a10E9PXN7 530 aa7.43□□□□□ -1.22
Xrn1-201ENSMUST00000034981 Hdac4Q6NZM9 1076 aa7.43□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms