RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Gm11595B1AQA7 289 aa5.26□□□□□ -1.57
Ssr1-204ENSMUST00000225319 Krtap4-8B1AQA8 209 aa5.26□□□□□ -1.57
Ssr1-204ENSMUST00000225319 Gm6217A0A1Y7VJK9 128 aa5.2□□□□□ -1.58
Ssr1-204ENSMUST00000225319 A0A286YCP9 139 aa5.18□□□□□ -1.58
Ssr1-204ENSMUST00000225319 Krtap4-9B1AQA9 244 aa5.11□□□□□ -1.59
Ssr1-204ENSMUST00000225319 Lce1eQ9D139 143 aa5.09□□□□□ -1.59
Ssr1-204ENSMUST00000225319 Mt4P47945 62 aa5.01□□□□□ -1.61
Ssr1-204ENSMUST00000225319 Lce1a1Q9CQH5 143 aa4.96□□□□□ -1.62
Ssr1-204ENSMUST00000225319 Sprr2gO70558 76 aa4.95□□□□□ -1.62
Ssr1-204ENSMUST00000225319 Krtap4-13Q9D7P3 165 aa4.92□□□□□ -1.62
Ssr1-204ENSMUST00000225319 Krtap6-3A0A087WQL6 57 aa4.91□□□□□ -1.62
Ssr1-204ENSMUST00000225319 Lce1dQ9D731 133 aa4.91□□□□□ -1.62
Ssr1-204ENSMUST00000225319 Gm10272F7CZ33 110 aa4.9□□□□□ -1.62
Ssr1-204ENSMUST00000225319 Sprr2dO70555 85 aa4.88□□□□□ -1.63
Ssr1-204ENSMUST00000225319 4933428G20RikQ9D3X4 101 aa4.87□□□□□ -1.63
Ssr1-204ENSMUST00000225319 Gm11559Q9D3H7 191 aa4.86□□□□□ -1.63
Ssr1-204ENSMUST00000225319 Fsip2A2ARZ3 6995 aa4.83□□□□□ -1.64
Ssr1-204ENSMUST00000225319 Sprr2kO70562 68 aa4.8□□□□□ -1.64
Ssr1-204ENSMUST00000225319 Gm11938Q9D3H4 131 aa4.79□□□□□ -1.64
Ssr1-204ENSMUST00000225319 Lce1lQ9D1G7 135 aa4.73□□□□□ -1.65
Ssr1-204ENSMUST00000225319 2300003K06RikA2A4M0 262 aa4.72□□□□□ -1.65
Ssr1-204ENSMUST00000225319 Lce3bQ9CQM7 98 aa4.64□□□□□ -1.67
Ssr1-204ENSMUST00000225319 Syne1Q6ZWR6 8799 aa4.61□□□□□ -1.67
Ssr1-204ENSMUST00000225319 Krtap19-4Q925H7 84 aa4.59□□□□□ -1.67
Ssr1-204ENSMUST00000225319 Lce1cQ9D1C5 147 aa4.54□□□□□ -1.68
Ssr1-204ENSMUST00000225319 Krtap20-2E9Q0A8 60 aa4.47□□□□□ -1.69
Ssr1-204ENSMUST00000225319 Gm10100J3QK64 120 aa4.43□□□□□ -1.7
Ssr1-204ENSMUST00000225319 Sprr2iO70560 76 aa4.43□□□□□ -1.7
Ssr1-204ENSMUST00000225319 Krtap5-2Q9D5Z7 189 aa4.42□□□□□ -1.7
Ssr1-204ENSMUST00000225319 Lce1kJ3QP15 125 aa4.41□□□□□ -1.7
Ssr1-204ENSMUST00000225319 Lce1fB9EJP6 147 aa4.37□□□□□ -1.71
Ssr1-204ENSMUST00000225319 Gm10142J3KMP7 120 aa4.36□□□□□ -1.71
Ssr1-204ENSMUST00000225319 Lce3cQ91V05 98 aa4.34□□□□□ -1.71
Ssr1-204ENSMUST00000225319 Gm11568A2A4M2 211 aa4.33□□□□□ -1.72
Ssr1-204ENSMUST00000225319 Krtap9-1Q64526 186 aa4.33□□□□□ -1.72
Ssr1-204ENSMUST00000225319 Mt1P02802 61 aaKnown RBP4.32□□□□□ -1.72
Ssr1-204ENSMUST00000225319 Lce3dE9Q8V1 98 aa4.29□□□□□ -1.72
Ssr1-204ENSMUST00000225319 Lce3eF8VQJ0 98 aa4.25□□□□□ -1.73
Ssr1-204ENSMUST00000225319 Lce3fQ6PAI4 98 aa4.25□□□□□ -1.73
Ssr1-204ENSMUST00000225319 Sprr2hO70559 108 aa4.24□□□□□ -1.73
Ssr1-204ENSMUST00000225319 ObscnA2AAJ9 8891 aaKnown RBP4.21□□□□□ -1.74
Ssr1-204ENSMUST00000225319 Sprr2eO70556 76 aa4.16□□□□□ -1.74
Ssr1-204ENSMUST00000225319 Gm10153A0A1B0GRL1 320 aa4.13□□□□□ -1.75
Ssr1-204ENSMUST00000225319 Gm4553A0A1B0GSA9 284 aa4.12□□□□□ -1.75
Ssr1-204ENSMUST00000225319 Eppk1Q8R0W0 6548 aa4.11□□□□□ -1.75
Ssr1-204ENSMUST00000225319 Lce3aQ497I5 98 aa4.08□□□□□ -1.76
Ssr1-204ENSMUST00000225319 Gm45337A0A1B0GS71 263 aa4.06□□□□□ -1.76
Ssr1-204ENSMUST00000225319 Gm11554B1AQB2 190 aa4.05□□□□□ -1.76
Ssr1-204ENSMUST00000225319 Sprr2fO70557 76 aa4.01□□□□□ -1.77
Ssr1-204ENSMUST00000225319 Gm2431E9Q8S1 172 aa3.95□□□□□ -1.78
Ssr1-204ENSMUST00000225319 Gm40460A0A1B0GR10 244 aa3.95□□□□□ -1.78
Ssr1-204ENSMUST00000225319 Gm7579A0A1B0GRJ4 243 aa3.95□□□□□ -1.78
Ssr1-204ENSMUST00000225319 Krtap5-5Q2TA51 241 aa3.95□□□□□ -1.78
Ssr1-204ENSMUST00000225319 Krtap5-4Q62220 223 aa3.95□□□□□ -1.78
Ssr1-204ENSMUST00000225319 Kmt2dQ6PDK2 5588 aa3.92□□□□□ -1.78
Ssr1-204ENSMUST00000225319 Mt3P28184 68 aa3.89□□□□□ -1.79
Ssr1-204ENSMUST00000225319 Gm11639A0A1D5RLM8 5808 aa3.89□□□□□ -1.79
Ssr1-204ENSMUST00000225319 Gm45618A0A1B0GSA0 219 aa3.88□□□□□ -1.79
Ssr1-204ENSMUST00000225319 Macf1Q9QXZ0 7354 aaKnown RBP3.83□□□□□ -1.8
Ssr1-204ENSMUST00000225319 Hmcn1D3YXG0 5634 aa3.76□□□□□ -1.81
Ssr1-204ENSMUST00000225319 Gm39115A0A1B0GSH7 232 aa3.72□□□□□ -1.81
Ssr1-204ENSMUST00000225319 Gpr98Q8VHN7 6298 aaKnown RBP3.7□□□□□ -1.82
Ssr1-204ENSMUST00000225319 Muc19Q6PZE0 7524 aa3.68□□□□□ -1.82
Ssr1-204ENSMUST00000225319 Krtap4-16Q91W93 202 aa3.61□□□□□ -1.83
Ssr1-204ENSMUST00000225319 Gm10024A0A0A0MQA4 119 aa3.59□□□□□ -1.84
Ssr1-204ENSMUST00000225319 DstQ91ZU6 7393 aaKnown RBP3.41□□□□□ -1.86
Ssr1-204ENSMUST00000225319 Gm11567Q9D141 195 aa3.39□□□□□ -1.87
Ssr1-204ENSMUST00000225319 NebE9Q1W3 7152 aa3.36□□□□□ -1.87
Ssr1-204ENSMUST00000225319 Gm29735A0A1B0GT06 219 aa3.35□□□□□ -1.87
Ssr1-204ENSMUST00000225319 AhnakE9Q616 5656 aaKnown RBP3.28□□□□□ -1.88
Ssr1-204ENSMUST00000225319 1110025L11RikO09048 78 aa3.24□□□□□ -1.89
Ssr1-204ENSMUST00000225319 Krtap6-5Q925H3 78 aa3.24□□□□□ -1.89
Ssr1-204ENSMUST00000225319 Muc16A0A140LJ72 8478 aa3.03□□□□□ -1.92
Ssr1-204ENSMUST00000225319 Sprr2bO70554 98 aa2.94□□□□□ -1.94
Ssr1-204ENSMUST00000225319 Gm10229O08631 77 aa2.87□□□□□ -1.95
Ssr1-204ENSMUST00000225319 Krtap5-1Q64507 230 aa2.68□□□□□ -1.98
Ssr1-204ENSMUST00000225319 Krtap21-1Q925H4 128 aa2.66□□□□□ -1.98
Ssr1-204ENSMUST00000225319 Gm4559A4IF42 199 aa2.6□□□□□ -1.99
Ssr1-204ENSMUST00000225319 Phgr1Q8K0G7 91 aa2.49□□□□□ -2.01
Ssr1-204ENSMUST00000225319 Krtap6-2O08884 159 aa2.47□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 11.2 ms