RNA–Protein interactions for RNA: ENSMUST00000213324.1

Scg3-202, Transcript of Secretogranin-3, mousemouse

TSL 1 (best) BASIC

Gene Scg3, Length 2,152 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scg3-202ENSMUST00000213324 Gm11595B1AQA7 289 aa4.4□□□□□ -1.71
Scg3-202ENSMUST00000213324 Krtap4-8B1AQA8 209 aa4.4□□□□□ -1.71
Scg3-202ENSMUST00000213324 Lce1eQ9D139 143 aa4.38□□□□□ -1.71
Scg3-202ENSMUST00000213324 Syne2Q6ZWQ0 6874 aaKnown RBP4.35□□□□□ -1.71
Scg3-202ENSMUST00000213324 Lce1bQ9D149 137 aa4.33□□□□□ -1.72
Scg3-202ENSMUST00000213324 Mt4P47945 62 aa4.33□□□□□ -1.72
Scg3-202ENSMUST00000213324 Krtap4-9B1AQA9 244 aa4.29□□□□□ -1.72
Scg3-202ENSMUST00000213324 Krtap19-4Q925H7 84 aa4.29□□□□□ -1.72
Scg3-202ENSMUST00000213324 Lce3bQ9CQM7 98 aa4.28□□□□□ -1.72
Scg3-202ENSMUST00000213324 Gm38119A0A0A6YX29 146 aa4.26□□□□□ -1.73
Scg3-202ENSMUST00000213324 Lce1cQ9D1C5 147 aa4.24□□□□□ -1.73
Scg3-202ENSMUST00000213324 Syne1Q6ZWR6 8799 aa4.23□□□□□ -1.73
Scg3-202ENSMUST00000213324 A030003K21RikA0A1Y7VIM3 128 aa4.21□□□□□ -1.73
Scg3-202ENSMUST00000213324 2300003K06RikA2A4M0 262 aa4.13□□□□□ -1.75
Scg3-202ENSMUST00000213324 Krtap4-13Q9D7P3 165 aa4.13□□□□□ -1.75
Scg3-202ENSMUST00000213324 Fsip2A2ARZ3 6995 aa4.11□□□□□ -1.75
Scg3-202ENSMUST00000213324 Gm10100J3QK64 120 aa4.1□□□□□ -1.75
Scg3-202ENSMUST00000213324 Sprr2kO70562 68 aa4.1□□□□□ -1.75
Scg3-202ENSMUST00000213324 A0A286YCP9 139 aa4.08□□□□□ -1.76
Scg3-202ENSMUST00000213324 Lce1fB9EJP6 147 aa4.06□□□□□ -1.76
Scg3-202ENSMUST00000213324 Lce3cQ91V05 98 aa4.06□□□□□ -1.76
Scg3-202ENSMUST00000213324 Lce1a1Q9CQH5 143 aa4.06□□□□□ -1.76
Scg3-202ENSMUST00000213324 Gm6217A0A1Y7VJK9 128 aa4.04□□□□□ -1.76
Scg3-202ENSMUST00000213324 Lce3eF8VQJ0 98 aa4.02□□□□□ -1.77
Scg3-202ENSMUST00000213324 Gm10142J3KMP7 120 aa4.02□□□□□ -1.77
Scg3-202ENSMUST00000213324 Lce3fQ6PAI4 98 aa4.02□□□□□ -1.77
Scg3-202ENSMUST00000213324 Lce3dE9Q8V1 98 aa4□□□□□ -1.77
Scg3-202ENSMUST00000213324 Sprr2iO70560 76 aa3.99□□□□□ -1.77
Scg3-202ENSMUST00000213324 Lce1kJ3QP15 125 aa3.96□□□□□ -1.78
Scg3-202ENSMUST00000213324 Mt1P02802 61 aaKnown RBP3.93□□□□□ -1.78
Scg3-202ENSMUST00000213324 Lce1lQ9D1G7 135 aa3.92□□□□□ -1.78
Scg3-202ENSMUST00000213324 Sprr2hO70559 108 aa3.9□□□□□ -1.78
Scg3-202ENSMUST00000213324 ObscnA2AAJ9 8891 aaKnown RBP3.89□□□□□ -1.79
Scg3-202ENSMUST00000213324 Krtap6-3A0A087WQL6 57 aa3.87□□□□□ -1.79
Scg3-202ENSMUST00000213324 Lce3aQ497I5 98 aa3.85□□□□□ -1.79
Scg3-202ENSMUST00000213324 Gm11568A2A4M2 211 aa3.83□□□□□ -1.8
Scg3-202ENSMUST00000213324 Krtap9-1Q64526 186 aa3.83□□□□□ -1.8
Scg3-202ENSMUST00000213324 Krtap5-2Q9D5Z7 189 aa3.83□□□□□ -1.8
Scg3-202ENSMUST00000213324 Krtap20-2E9Q0A8 60 aa3.8□□□□□ -1.8
Scg3-202ENSMUST00000213324 Sprr2eO70556 76 aa3.75□□□□□ -1.81
Scg3-202ENSMUST00000213324 Gm10153A0A1B0GRL1 320 aa3.63□□□□□ -1.83
Scg3-202ENSMUST00000213324 Sprr2fO70557 76 aa3.54□□□□□ -1.84
Scg3-202ENSMUST00000213324 Gm4553A0A1B0GSA9 284 aa3.53□□□□□ -1.84
Scg3-202ENSMUST00000213324 Mt3P28184 68 aa3.53□□□□□ -1.84
Scg3-202ENSMUST00000213324 Gm45337A0A1B0GS71 263 aa3.51□□□□□ -1.85
Scg3-202ENSMUST00000213324 Krtap31-2Q8CAY5 177 aa3.51□□□□□ -1.85
Scg3-202ENSMUST00000213324 Krtap31-1Q9D644 177 aa3.51□□□□□ -1.85
Scg3-202ENSMUST00000213324 Gm11559Q9D3H7 191 aa3.49□□□□□ -1.85
Scg3-202ENSMUST00000213324 Gm40460A0A1B0GR10 244 aa3.41□□□□□ -1.86
Scg3-202ENSMUST00000213324 Gm7579A0A1B0GRJ4 243 aa3.41□□□□□ -1.86
Scg3-202ENSMUST00000213324 Krtap5-5Q2TA51 241 aa3.41□□□□□ -1.86
Scg3-202ENSMUST00000213324 Krtap5-4Q62220 223 aa3.41□□□□□ -1.86
Scg3-202ENSMUST00000213324 Gm2431E9Q8S1 172 aa3.4□□□□□ -1.87
Scg3-202ENSMUST00000213324 Macf1Q9QXZ0 7354 aaKnown RBP3.35□□□□□ -1.87
Scg3-202ENSMUST00000213324 Gm10024A0A0A0MQA4 119 aa3.35□□□□□ -1.87
Scg3-202ENSMUST00000213324 Gm11554B1AQB2 190 aa3.34□□□□□ -1.88
Scg3-202ENSMUST00000213324 Hmcn1D3YXG0 5634 aa3.31□□□□□ -1.88
Scg3-202ENSMUST00000213324 Gm45618A0A1B0GSA0 219 aa3.25□□□□□ -1.89
Scg3-202ENSMUST00000213324 Krtap4-16Q91W93 202 aa3.22□□□□□ -1.89
Scg3-202ENSMUST00000213324 Kmt2dQ6PDK2 5588 aa3.22□□□□□ -1.89
Scg3-202ENSMUST00000213324 Gpr98Q8VHN7 6298 aaKnown RBP3.2□□□□□ -1.9
Scg3-202ENSMUST00000213324 Eppk1Q8R0W0 6548 aa3.18□□□□□ -1.9
Scg3-202ENSMUST00000213324 Gm39115A0A1B0GSH7 232 aa3.16□□□□□ -1.9
Scg3-202ENSMUST00000213324 Gm11567Q9D141 195 aa3.08□□□□□ -1.92
Scg3-202ENSMUST00000213324 1110025L11RikO09048 78 aa3□□□□□ -1.93
Scg3-202ENSMUST00000213324 Krtap6-5Q925H3 78 aa3□□□□□ -1.93
Scg3-202ENSMUST00000213324 Gm29735A0A1B0GT06 219 aa2.98□□□□□ -1.93
Scg3-202ENSMUST00000213324 DstQ91ZU6 7393 aaKnown RBP2.93□□□□□ -1.94
Scg3-202ENSMUST00000213324 Gm11639A0A1D5RLM8 5808 aa2.93□□□□□ -1.94
Scg3-202ENSMUST00000213324 Muc16A0A140LJ72 8478 aa2.86□□□□□ -1.95
Scg3-202ENSMUST00000213324 Muc19Q6PZE0 7524 aa2.84□□□□□ -1.96
Scg3-202ENSMUST00000213324 AhnakE9Q616 5656 aaKnown RBP2.81□□□□□ -1.96
Scg3-202ENSMUST00000213324 Sprr2bO70554 98 aa2.72□□□□□ -1.97
Scg3-202ENSMUST00000213324 Gm10229O08631 77 aa2.65□□□□□ -1.99
Scg3-202ENSMUST00000213324 NebE9Q1W3 7152 aa2.57□□□□□ -2
Scg3-202ENSMUST00000213324 Krtap21-1Q925H4 128 aa2.46□□□□□ -2.02
Scg3-202ENSMUST00000213324 Phgr1Q8K0G7 91 aa2.3□□□□□ -2.04
Scg3-202ENSMUST00000213324 Krtap6-2O08884 159 aa2.25□□□□□ -2.05
Scg3-202ENSMUST00000213324 Krtap5-1Q64507 230 aa2.1□□□□□ -2.07
Scg3-202ENSMUST00000213324 Gm4559A4IF42 199 aa2.08□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 12 ms