RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Gm20538F6Z9R1 75 aa5.45□□□□□ -1.54
Pdlim5-212ENSMUST00000200043 Gm10272F7CZ33 110 aa5.44□□□□□ -1.54
Pdlim5-212ENSMUST00000200043 Syne1Q6ZWR6 8799 aa5.43□□□□□ -1.54
Pdlim5-212ENSMUST00000200043 Krtap28-13A0A087WQP5 138 aa5.42□□□□□ -1.54
Pdlim5-212ENSMUST00000200043 2310046K23RikA0A0A6YVW6 87 aa5.42□□□□□ -1.54
Pdlim5-212ENSMUST00000200043 Sprr2iO70560 76 aa5.38□□□□□ -1.55
Pdlim5-212ENSMUST00000200043 Lce1kJ3QP15 125 aa5.38□□□□□ -1.55
Pdlim5-212ENSMUST00000200043 Krtap5-2Q9D5Z7 189 aa5.38□□□□□ -1.55
Pdlim5-212ENSMUST00000200043 Lce1eQ9D139 143 aa5.37□□□□□ -1.55
Pdlim5-212ENSMUST00000200043 Lce3bQ9CQM7 98 aa5.35□□□□□ -1.55
Pdlim5-212ENSMUST00000200043 A030005K14RikA0A1Y7VNY1 122 aa5.3□□□□□ -1.56
Pdlim5-212ENSMUST00000200043 Tnp1P10856 55 aa5.27□□□□□ -1.57
Pdlim5-212ENSMUST00000200043 Gm11568A2A4M2 211 aa5.23□□□□□ -1.57
Pdlim5-212ENSMUST00000200043 Krtap9-1Q64526 186 aa5.23□□□□□ -1.57
Pdlim5-212ENSMUST00000200043 Gm11559Q9D3H7 191 aa5.21□□□□□ -1.58
Pdlim5-212ENSMUST00000200043 Ndufaf8A2AMZ4 74 aa5.12□□□□□ -1.59
Pdlim5-212ENSMUST00000200043 Lce1fB9EJP6 147 aa5.1□□□□□ -1.59
Pdlim5-212ENSMUST00000200043 Lce1cQ9D1C5 147 aa5.1□□□□□ -1.59
Pdlim5-212ENSMUST00000200043 Gm4553A0A1B0GSA9 284 aa5.09□□□□□ -1.59
Pdlim5-212ENSMUST00000200043 Gm11554B1AQB2 190 aa5.09□□□□□ -1.59
Pdlim5-212ENSMUST00000200043 Eppk1Q8R0W0 6548 aa5.05□□□□□ -1.6
Pdlim5-212ENSMUST00000200043 Macf1Q9QXZ0 7354 aaKnown RBP5.04□□□□□ -1.6
Pdlim5-212ENSMUST00000200043 A030005L19RikA0A1Y7VIU2 113 aa5.02□□□□□ -1.61
Pdlim5-212ENSMUST00000200043 Gm11938Q9D3H4 131 aa5.02□□□□□ -1.61
Pdlim5-212ENSMUST00000200043 Kmt2dQ6PDK2 5588 aa5.01□□□□□ -1.61
Pdlim5-212ENSMUST00000200043 Gm2431E9Q8S1 172 aa4.95□□□□□ -1.62
Pdlim5-212ENSMUST00000200043 Mt1P02802 61 aaKnown RBP4.95□□□□□ -1.62
Pdlim5-212ENSMUST00000200043 Gm45337A0A1B0GS71 263 aa4.92□□□□□ -1.62
Pdlim5-212ENSMUST00000200043 Gm10153A0A1B0GRL1 320 aa4.87□□□□□ -1.63
Pdlim5-212ENSMUST00000200043 Lce3cQ91V05 98 aa4.85□□□□□ -1.63
Pdlim5-212ENSMUST00000200043 A0A1Y7VJ07 166 aa4.84□□□□□ -1.63
Pdlim5-212ENSMUST00000200043 Gm7544A0A1Y7VJ58 118 aa4.84□□□□□ -1.63
Pdlim5-212ENSMUST00000200043 Hmcn1D3YXG0 5634 aa4.81□□□□□ -1.64
Pdlim5-212ENSMUST00000200043 Krtap19-4Q925H7 84 aa4.81□□□□□ -1.64
Pdlim5-212ENSMUST00000200043 Lce3dE9Q8V1 98 aa4.77□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 Gm40460A0A1B0GR10 244 aa4.74□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 Gm7579A0A1B0GRJ4 243 aa4.74□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 Krtap5-5Q2TA51 241 aa4.74□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 Krtap5-4Q62220 223 aa4.74□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 Gm11639A0A1D5RLM8 5808 aa4.74□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 A030014E15RikA0A1Y7VJV2 120 aa4.72□□□□□ -1.65
Pdlim5-212ENSMUST00000200043 Lce3eF8VQJ0 98 aa4.66□□□□□ -1.66
Pdlim5-212ENSMUST00000200043 Lce3fQ6PAI4 98 aa4.66□□□□□ -1.66
Pdlim5-212ENSMUST00000200043 Muc19Q6PZE0 7524 aa4.64□□□□□ -1.67
Pdlim5-212ENSMUST00000200043 ObscnA2AAJ9 8891 aaKnown RBP4.63□□□□□ -1.67
Pdlim5-212ENSMUST00000200043 Gm39115A0A1B0GSH7 232 aa4.61□□□□□ -1.67
Pdlim5-212ENSMUST00000200043 Sprr2dO70555 85 aa4.58□□□□□ -1.68
Pdlim5-212ENSMUST00000200043 Gm9112A2AI92 75 aa4.53□□□□□ -1.69
Pdlim5-212ENSMUST00000200043 Mt3P28184 68 aa4.53□□□□□ -1.69
Pdlim5-212ENSMUST00000200043 4933428G20RikQ9D3X4 101 aa4.48□□□□□ -1.69
Pdlim5-212ENSMUST00000200043 DstQ91ZU6 7393 aaKnown RBP4.48□□□□□ -1.69
Pdlim5-212ENSMUST00000200043 Lce3aQ497I5 98 aa4.46□□□□□ -1.7
Pdlim5-212ENSMUST00000200043 Gpr98Q8VHN7 6298 aaKnown RBP4.41□□□□□ -1.7
Pdlim5-212ENSMUST00000200043 Gm10100J3QK64 120 aa4.3□□□□□ -1.72
Pdlim5-212ENSMUST00000200043 Krtap4-16Q91W93 202 aa4.27□□□□□ -1.73
Pdlim5-212ENSMUST00000200043 Sprr2fO70557 76 aa4.27□□□□□ -1.73
Pdlim5-212ENSMUST00000200043 AhnakE9Q616 5656 aaKnown RBP4.26□□□□□ -1.73
Pdlim5-212ENSMUST00000200043 NebE9Q1W3 7152 aa4.26□□□□□ -1.73
Pdlim5-212ENSMUST00000200043 Gm45618A0A1B0GSA0 219 aa4.24□□□□□ -1.73
Pdlim5-212ENSMUST00000200043 Krtap31-2Q8CAY5 177 aa4.22□□□□□ -1.73
Pdlim5-212ENSMUST00000200043 A030003K21RikA0A1Y7VIM3 128 aa4.18□□□□□ -1.74
Pdlim5-212ENSMUST00000200043 Gm10142J3KMP7 120 aa4.09□□□□□ -1.75
Pdlim5-212ENSMUST00000200043 Krtap31-1Q9D644 177 aa4.09□□□□□ -1.75
Pdlim5-212ENSMUST00000200043 Sprr2eO70556 76 aa4.01□□□□□ -1.77
Pdlim5-212ENSMUST00000200043 Gm6217A0A1Y7VJK9 128 aa3.98□□□□□ -1.77
Pdlim5-212ENSMUST00000200043 Sprr2hO70559 108 aa3.97□□□□□ -1.77
Pdlim5-212ENSMUST00000200043 Gm10024A0A0A0MQA4 119 aa3.89□□□□□ -1.79
Pdlim5-212ENSMUST00000200043 A0A286YCP9 139 aa3.72□□□□□ -1.81
Pdlim5-212ENSMUST00000200043 1110025L11RikO09048 78 aa3.57□□□□□ -1.84
Pdlim5-212ENSMUST00000200043 Krtap6-5Q925H3 78 aa3.57□□□□□ -1.84
Pdlim5-212ENSMUST00000200043 Muc16A0A140LJ72 8478 aa3.53□□□□□ -1.84
Pdlim5-212ENSMUST00000200043 Gm29735A0A1B0GT06 219 aa3.51□□□□□ -1.85
Pdlim5-212ENSMUST00000200043 Gm11567Q9D141 195 aa3.36□□□□□ -1.87
Pdlim5-212ENSMUST00000200043 Gm10229O08631 77 aa3.2□□□□□ -1.9
Pdlim5-212ENSMUST00000200043 Krtap21-1Q925H4 128 aa2.9□□□□□ -1.95
Pdlim5-212ENSMUST00000200043 Krtap6-2O08884 159 aa2.83□□□□□ -1.96
Pdlim5-212ENSMUST00000200043 Sprr2bO70554 98 aa2.77□□□□□ -1.97
Pdlim5-212ENSMUST00000200043 Krtap5-1Q64507 230 aa2.6□□□□□ -1.99
Pdlim5-212ENSMUST00000200043 Phgr1Q8K0G7 91 aa2.38□□□□□ -2.03
Pdlim5-212ENSMUST00000200043 Gm4559A4IF42 199 aa2.04□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 81.2 ms