RNA–Protein interactions for RNA: ENSMUST00000130360.1

Synpo-206, Transcript of Synaptopodin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Synpo, Length 5,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Synpo-206ENSMUST00000130360 Krtap31-1Q9D644 177 aa4.97□□□□□ -1.61
Synpo-206ENSMUST00000130360 Rnf213E9Q555 5152 aaKnown RBP4.86□□□□□ -1.63
Synpo-206ENSMUST00000130360 Ush2AQ2QI47 5193 aa4.86□□□□□ -1.63
Synpo-206ENSMUST00000130360 Syne1Q6ZWR6 8799 aa4.83□□□□□ -1.64
Synpo-206ENSMUST00000130360 Muc5bE9Q5I3 4800 aa4.81□□□□□ -1.64
Synpo-206ENSMUST00000130360 Mt4P47945 62 aa4.78□□□□□ -1.64
Synpo-206ENSMUST00000130360 Krtap4-6Q3V4B7 195 aa4.76□□□□□ -1.65
Synpo-206ENSMUST00000130360 Krtap31-2Q8CAY5 177 aa4.65□□□□□ -1.67
Synpo-206ENSMUST00000130360 Krtap4-2B1AQ85 167 aa4.62□□□□□ -1.67
Synpo-206ENSMUST00000130360 Krtap4-1Q3UUY3 169 aa4.6□□□□□ -1.67
Synpo-206ENSMUST00000130360 SspoQ8CG65 4998 aa4.58□□□□□ -1.68
Synpo-206ENSMUST00000130360 Krtap4-16Q91W93 202 aa4.57□□□□□ -1.68
Synpo-206ENSMUST00000130360 Gm11564A2A4L9 201 aa4.48□□□□□ -1.69
Synpo-206ENSMUST00000130360 Gm11563B1AQ90 168 aa4.48□□□□□ -1.69
Synpo-206ENSMUST00000130360 Gm11595B1AQA7 289 aa4.48□□□□□ -1.69
Synpo-206ENSMUST00000130360 Krtap4-8B1AQA8 209 aa4.48□□□□□ -1.69
Synpo-206ENSMUST00000130360 2300003K06RikA2A4M0 262 aa4.47□□□□□ -1.69
Synpo-206ENSMUST00000130360 Gm11596B1AQB0 205 aa4.46□□□□□ -1.7
Synpo-206ENSMUST00000130360 Lce1kJ3QP15 125 aa4.45□□□□□ -1.7
Synpo-206ENSMUST00000130360 Krtap4-9B1AQA9 244 aa4.45□□□□□ -1.7
Synpo-206ENSMUST00000130360 Lce1a1Q9CQH5 143 aa4.44□□□□□ -1.7
Synpo-206ENSMUST00000130360 Krtap4-7Q9D732 168 aa4.38□□□□□ -1.71
Synpo-206ENSMUST00000130360 Mt3P28184 68 aa4.37□□□□□ -1.71
Synpo-206ENSMUST00000130360 Mt1P02802 61 aaKnown RBP4.34□□□□□ -1.71
Synpo-206ENSMUST00000130360 Krtap4-13Q9D7P3 165 aa4.3□□□□□ -1.72
Synpo-206ENSMUST00000130360 Fsip2A2ARZ3 6995 aa4.16□□□□□ -1.74
Synpo-206ENSMUST00000130360 ObscnA2AAJ9 8891 aaKnown RBP4.1□□□□□ -1.75
Synpo-206ENSMUST00000130360 Syne2Q6ZWQ0 6874 aaKnown RBP4.03□□□□□ -1.76
Synpo-206ENSMUST00000130360 Muc16A0A140LJ72 8478 aa3.99□□□□□ -1.77
Synpo-206ENSMUST00000130360 Krtap6-3A0A087WQL6 57 aa3.97□□□□□ -1.77
Synpo-206ENSMUST00000130360 Krtap20-2E9Q0A8 60 aa3.9□□□□□ -1.79
Synpo-206ENSMUST00000130360 Sprr2bO70554 98 aa3.89□□□□□ -1.79
Synpo-206ENSMUST00000130360 Gm11555B1AQ89 175 aa3.77□□□□□ -1.81
Synpo-206ENSMUST00000130360 Gm11554B1AQB2 190 aa3.75□□□□□ -1.81
Synpo-206ENSMUST00000130360 1110025L11RikO09048 78 aa3.51□□□□□ -1.85
Synpo-206ENSMUST00000130360 Krtap6-5Q925H3 78 aa3.51□□□□□ -1.85
Synpo-206ENSMUST00000130360 Eppk1Q8R0W0 6548 aa3.49□□□□□ -1.85
Synpo-206ENSMUST00000130360 Kmt2dQ6PDK2 5588 aa3.47□□□□□ -1.85
Synpo-206ENSMUST00000130360 Macf1Q9QXZ0 7354 aaKnown RBP3.46□□□□□ -1.86
Synpo-206ENSMUST00000130360 Gm11568A2A4M2 211 aa3.4□□□□□ -1.86
Synpo-206ENSMUST00000130360 Krtap9-1Q64526 186 aa3.4□□□□□ -1.86
Synpo-206ENSMUST00000130360 DstQ91ZU6 7393 aaKnown RBP3.39□□□□□ -1.87
Synpo-206ENSMUST00000130360 Gm10229O08631 77 aa3.24□□□□□ -1.89
Synpo-206ENSMUST00000130360 Gm11559Q9D3H7 191 aa3.21□□□□□ -1.9
Synpo-206ENSMUST00000130360 NebE9Q1W3 7152 aa3.18□□□□□ -1.9
Synpo-206ENSMUST00000130360 Krtap5-2Q9D5Z7 189 aa3.16□□□□□ -1.9
Synpo-206ENSMUST00000130360 Phgr1Q8K0G7 91 aa3.1□□□□□ -1.91
Synpo-206ENSMUST00000130360 Muc19Q6PZE0 7524 aa3.07□□□□□ -1.92
Synpo-206ENSMUST00000130360 Gpr98Q8VHN7 6298 aaKnown RBP2.98□□□□□ -1.93
Synpo-206ENSMUST00000130360 Gm4553A0A1B0GSA9 284 aa2.92□□□□□ -1.94
Synpo-206ENSMUST00000130360 Gm11639A0A1D5RLM8 5808 aa2.91□□□□□ -1.94
Synpo-206ENSMUST00000130360 Hmcn1D3YXG0 5634 aa2.91□□□□□ -1.94
Synpo-206ENSMUST00000130360 Gm10153A0A1B0GRL1 320 aa2.85□□□□□ -1.95
Synpo-206ENSMUST00000130360 Gm2431E9Q8S1 172 aa2.72□□□□□ -1.97
Synpo-206ENSMUST00000130360 Gm45337A0A1B0GS71 263 aa2.68□□□□□ -1.98
Synpo-206ENSMUST00000130360 Gm40460A0A1B0GR10 244 aa2.66□□□□□ -1.98
Synpo-206ENSMUST00000130360 Gm7579A0A1B0GRJ4 243 aa2.66□□□□□ -1.98
Synpo-206ENSMUST00000130360 Krtap5-5Q2TA51 241 aa2.66□□□□□ -1.98
Synpo-206ENSMUST00000130360 Krtap5-4Q62220 223 aa2.66□□□□□ -1.98
Synpo-206ENSMUST00000130360 Krtap6-2O08884 159 aa2.62□□□□□ -1.99
Synpo-206ENSMUST00000130360 Krtap21-1Q925H4 128 aa2.6□□□□□ -1.99
Synpo-206ENSMUST00000130360 AhnakE9Q616 5656 aaKnown RBP2.58□□□□□ -2
Synpo-206ENSMUST00000130360 A0A1Y7VJH8 109 aa2.58□□□□□ -2
Synpo-206ENSMUST00000130360 A030005L19RikA0A1Y7VIU2 113 aa2.51□□□□□ -2.01
Synpo-206ENSMUST00000130360 Gm39115A0A1B0GSH7 232 aa2.38□□□□□ -2.03
Synpo-206ENSMUST00000130360 Gm11567Q9D141 195 aa2.34□□□□□ -2.04
Synpo-206ENSMUST00000130360 A0A1Y7VLE6 161 aa2.28□□□□□ -2.04
Synpo-206ENSMUST00000130360 Gm29735A0A1B0GT06 219 aa2.04□□□□□ -2.08
Synpo-206ENSMUST00000130360 Gm45618A0A1B0GSA0 219 aa1.97□□□□□ -2.09
Synpo-206ENSMUST00000130360 A0A1Y7VJ07 166 aa1.38□□□□□ -2.19
Synpo-206ENSMUST00000130360 A030005K14RikA0A1Y7VNY1 122 aa1.33□□□□□ -2.2
Synpo-206ENSMUST00000130360 Krtap28-10A0A1Y7VP58 119 aa1.33□□□□□ -2.2
Synpo-206ENSMUST00000130360 Krtap5-1Q64507 230 aa1.31□□□□□ -2.2
Synpo-206ENSMUST00000130360 Krtap28-13A0A087WQP5 138 aa1.31□□□□□ -2.2
Synpo-206ENSMUST00000130360 A030014E15RikA0A1Y7VJV2 120 aa1.3□□□□□ -2.2
Synpo-206ENSMUST00000130360 A0A286YCP9 139 aa1.25□□□□□ -2.21
Synpo-206ENSMUST00000130360 Gm7544A0A1Y7VJ58 118 aa1.21□□□□□ -2.22
Synpo-206ENSMUST00000130360 A030003K21RikA0A1Y7VIM3 128 aa1.18□□□□□ -2.22
Synpo-206ENSMUST00000130360 Gm6217A0A1Y7VJK9 128 aa1.13□□□□□ -2.23
Synpo-206ENSMUST00000130360 Gm4559A4IF42 199 aa1.04□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 7.3 ms