RNA–Protein interactions for RNA: ENSMUST00000115657.9

Pcdha11-202, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,360 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-202ENSMUST00000115657 Fat4Q2PZL6 4981 aa4.29□□□□□ -1.72
Pcdha11-202ENSMUST00000115657 Krtap31-1Q9D644 177 aa4.29□□□□□ -1.72
Pcdha11-202ENSMUST00000115657 Ubr4A2AN08 5180 aa4.29□□□□□ -1.72
Pcdha11-202ENSMUST00000115657 ZanO88799 5376 aa4.28□□□□□ -1.72
Pcdha11-202ENSMUST00000115657 Gm11596B1AQB0 205 aa4.21□□□□□ -1.74
Pcdha11-202ENSMUST00000115657 Krtap17-1A2A5X6 109 aa4.19□□□□□ -1.74
Pcdha11-202ENSMUST00000115657 Krtap4-1Q3UUY3 169 aa4.19□□□□□ -1.74
Pcdha11-202ENSMUST00000115657 Krtap31-2Q8CAY5 177 aa4.14□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 Muc5bE9Q5I3 4800 aa4.14□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 Gm11564A2A4L9 201 aa4.12□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 Gm11563B1AQ90 168 aa4.12□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 Gm11595B1AQA7 289 aa4.12□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 Krtap4-8B1AQA8 209 aa4.12□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 Ush2AQ2QI47 5193 aa4.12□□□□□ -1.75
Pcdha11-202ENSMUST00000115657 A0A1Y7VLE6 161 aa4.08□□□□□ -1.76
Pcdha11-202ENSMUST00000115657 Krtap4-9B1AQA9 244 aa4.06□□□□□ -1.76
Pcdha11-202ENSMUST00000115657 Rnf213E9Q555 5152 aaKnown RBP4.04□□□□□ -1.76
Pcdha11-202ENSMUST00000115657 Mt3P28184 68 aa4.01□□□□□ -1.77
Pcdha11-202ENSMUST00000115657 2300003K06RikA2A4M0 262 aa4□□□□□ -1.77
Pcdha11-202ENSMUST00000115657 Krtap4-7Q9D732 168 aa3.97□□□□□ -1.77
Pcdha11-202ENSMUST00000115657 Lce1kJ3QP15 125 aa3.94□□□□□ -1.78
Pcdha11-202ENSMUST00000115657 Krtap4-13Q9D7P3 165 aa3.93□□□□□ -1.78
Pcdha11-202ENSMUST00000115657 Syne2Q6ZWQ0 6874 aaKnown RBP3.92□□□□□ -1.78
Pcdha11-202ENSMUST00000115657 Krtap4-16Q91W93 202 aa3.91□□□□□ -1.78
Pcdha11-202ENSMUST00000115657 Mt1P02802 61 aaKnown RBP3.89□□□□□ -1.79
Pcdha11-202ENSMUST00000115657 SspoQ8CG65 4998 aa3.84□□□□□ -1.79
Pcdha11-202ENSMUST00000115657 Lce1a1Q9CQH5 143 aa3.84□□□□□ -1.79
Pcdha11-202ENSMUST00000115657 Krtap6-3A0A087WQL6 57 aa3.8□□□□□ -1.8
Pcdha11-202ENSMUST00000115657 Fsip2A2ARZ3 6995 aa3.78□□□□□ -1.8
Pcdha11-202ENSMUST00000115657 A030003K21RikA0A1Y7VIM3 128 aa3.67□□□□□ -1.82
Pcdha11-202ENSMUST00000115657 ObscnA2AAJ9 8891 aaKnown RBP3.65□□□□□ -1.83
Pcdha11-202ENSMUST00000115657 Sprr2bO70554 98 aa3.63□□□□□ -1.83
Pcdha11-202ENSMUST00000115657 A0A1Y7VJH8 109 aa3.6□□□□□ -1.83
Pcdha11-202ENSMUST00000115657 Muc16A0A140LJ72 8478 aa3.55□□□□□ -1.84
Pcdha11-202ENSMUST00000115657 Krtap28-10A0A1Y7VP58 119 aa3.53□□□□□ -1.84
Pcdha11-202ENSMUST00000115657 Gm11554B1AQB2 190 aa3.47□□□□□ -1.85
Pcdha11-202ENSMUST00000115657 Gm11555B1AQ89 175 aa3.46□□□□□ -1.86
Pcdha11-202ENSMUST00000115657 Eppk1Q8R0W0 6548 aa3.45□□□□□ -1.86
Pcdha11-202ENSMUST00000115657 Krtap20-2E9Q0A8 60 aa3.43□□□□□ -1.86
Pcdha11-202ENSMUST00000115657 Gm7544A0A1Y7VJ58 118 aa3.42□□□□□ -1.86
Pcdha11-202ENSMUST00000115657 Gm6217A0A1Y7VJK9 128 aa3.4□□□□□ -1.86
Pcdha11-202ENSMUST00000115657 Macf1Q9QXZ0 7354 aaKnown RBP3.39□□□□□ -1.87
Pcdha11-202ENSMUST00000115657 A030005L19RikA0A1Y7VIU2 113 aa3.36□□□□□ -1.87
Pcdha11-202ENSMUST00000115657 Krtap28-13A0A087WQP5 138 aa3.31□□□□□ -1.88
Pcdha11-202ENSMUST00000115657 A030005K14RikA0A1Y7VNY1 122 aa3.28□□□□□ -1.88
Pcdha11-202ENSMUST00000115657 DstQ91ZU6 7393 aaKnown RBP3.2□□□□□ -1.9
Pcdha11-202ENSMUST00000115657 Kmt2dQ6PDK2 5588 aa3.17□□□□□ -1.9
Pcdha11-202ENSMUST00000115657 A0A1Y7VJ07 166 aa3.11□□□□□ -1.91
Pcdha11-202ENSMUST00000115657 1110025L11RikO09048 78 aa3.11□□□□□ -1.91
Pcdha11-202ENSMUST00000115657 Krtap6-5Q925H3 78 aa3.11□□□□□ -1.91
Pcdha11-202ENSMUST00000115657 NebE9Q1W3 7152 aa3.04□□□□□ -1.92
Pcdha11-202ENSMUST00000115657 Gm11559Q9D3H7 191 aa2.92□□□□□ -1.94
Pcdha11-202ENSMUST00000115657 Gm10229O08631 77 aa2.89□□□□□ -1.95
Pcdha11-202ENSMUST00000115657 Gm11568A2A4M2 211 aa2.86□□□□□ -1.95
Pcdha11-202ENSMUST00000115657 Krtap9-1Q64526 186 aa2.86□□□□□ -1.95
Pcdha11-202ENSMUST00000115657 Muc19Q6PZE0 7524 aa2.83□□□□□ -1.96
Pcdha11-202ENSMUST00000115657 A030014E15RikA0A1Y7VJV2 120 aa2.76□□□□□ -1.97
Pcdha11-202ENSMUST00000115657 Phgr1Q8K0G7 91 aa2.72□□□□□ -1.97
Pcdha11-202ENSMUST00000115657 Gpr98Q8VHN7 6298 aaKnown RBP2.71□□□□□ -1.98
Pcdha11-202ENSMUST00000115657 Gm11639A0A1D5RLM8 5808 aa2.7□□□□□ -1.98
Pcdha11-202ENSMUST00000115657 Krtap5-2Q9D5Z7 189 aa2.68□□□□□ -1.98
Pcdha11-202ENSMUST00000115657 Gm4553A0A1B0GSA9 284 aa2.55□□□□□ -2
Pcdha11-202ENSMUST00000115657 Hmcn1D3YXG0 5634 aa2.5□□□□□ -2.01
Pcdha11-202ENSMUST00000115657 A0A286YCP9 139 aa2.43□□□□□ -2.02
Pcdha11-202ENSMUST00000115657 Gm2431E9Q8S1 172 aa2.38□□□□□ -2.03
Pcdha11-202ENSMUST00000115657 Gm10153A0A1B0GRL1 320 aa2.37□□□□□ -2.03
Pcdha11-202ENSMUST00000115657 Gm11567Q9D141 195 aa2.32□□□□□ -2.04
Pcdha11-202ENSMUST00000115657 Krtap6-2O08884 159 aa2.31□□□□□ -2.04
Pcdha11-202ENSMUST00000115657 AhnakE9Q616 5656 aaKnown RBP2.29□□□□□ -2.04
Pcdha11-202ENSMUST00000115657 Krtap21-1Q925H4 128 aa2.27□□□□□ -2.05
Pcdha11-202ENSMUST00000115657 Gm40460A0A1B0GR10 244 aa2.26□□□□□ -2.05
Pcdha11-202ENSMUST00000115657 Gm7579A0A1B0GRJ4 243 aa2.26□□□□□ -2.05
Pcdha11-202ENSMUST00000115657 Krtap5-5Q2TA51 241 aa2.26□□□□□ -2.05
Pcdha11-202ENSMUST00000115657 Krtap5-4Q62220 223 aa2.26□□□□□ -2.05
Pcdha11-202ENSMUST00000115657 Gm45337A0A1B0GS71 263 aa2.25□□□□□ -2.05
Pcdha11-202ENSMUST00000115657 Gm39115A0A1B0GSH7 232 aa2.11□□□□□ -2.07
Pcdha11-202ENSMUST00000115657 Gm45618A0A1B0GSA0 219 aa1.87□□□□□ -2.11
Pcdha11-202ENSMUST00000115657 Gm29735A0A1B0GT06 219 aa1.74□□□□□ -2.13
Pcdha11-202ENSMUST00000115657 Krtap5-1Q64507 230 aa1.32□□□□□ -2.2
Pcdha11-202ENSMUST00000115657 Gm4559A4IF42 199 aa1.12□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 74.7 ms