RNA–Protein interactions for RNA: ENSMUST00000113695.7

Tpm1-211, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-211ENSMUST00000113695 Gm7544A0A1Y7VJ58 118 aa7.56□□□□□ -1.2
Tpm1-211ENSMUST00000113695 A0A1Y7VJ07 166 aa7.52□□□□□ -1.21
Tpm1-211ENSMUST00000113695 Lce1eQ9D139 143 aa7.49□□□□□ -1.21
Tpm1-211ENSMUST00000113695 Lce1lQ9D1G7 135 aa7.38□□□□□ -1.23
Tpm1-211ENSMUST00000113695 A030014E15RikA0A1Y7VJV2 120 aa7.27□□□□□ -1.25
Tpm1-211ENSMUST00000113695 Gm10272F7CZ33 110 aa7.26□□□□□ -1.25
Tpm1-211ENSMUST00000113695 Lce1a1Q9CQH5 143 aa7.24□□□□□ -1.25
Tpm1-211ENSMUST00000113695 Sprr2gO70558 76 aa7.18□□□□□ -1.26
Tpm1-211ENSMUST00000113695 Gm11559Q9D3H7 191 aa7.17□□□□□ -1.26
Tpm1-211ENSMUST00000113695 Lce1dQ9D731 133 aa7.16□□□□□ -1.26
Tpm1-211ENSMUST00000113695 2310046K23RikA0A0A6YVW6 87 aa7.13□□□□□ -1.27
Tpm1-211ENSMUST00000113695 Mp68P56379 58 aa7.13□□□□□ -1.27
Tpm1-211ENSMUST00000113695 Lce3bQ9CQM7 98 aa7.08□□□□□ -1.28
Tpm1-211ENSMUST00000113695 Syne1Q6ZWR6 8799 aa7.03□□□□□ -1.28
Tpm1-211ENSMUST00000113695 Krtap20-2E9Q0A8 60 aa6.98□□□□□ -1.29
Tpm1-211ENSMUST00000113695 Sprr2iO70560 76 aa6.98□□□□□ -1.29
Tpm1-211ENSMUST00000113695 Lce1kJ3QP15 125 aa6.92□□□□□ -1.3
Tpm1-211ENSMUST00000113695 Krtap5-2Q9D5Z7 189 aa6.92□□□□□ -1.3
Tpm1-211ENSMUST00000113695 Gm11938Q9D3H4 131 aa6.9□□□□□ -1.31
Tpm1-211ENSMUST00000113695 Gm11568A2A4M2 211 aa6.71□□□□□ -1.34
Tpm1-211ENSMUST00000113695 Krtap9-1Q64526 186 aa6.71□□□□□ -1.34
Tpm1-211ENSMUST00000113695 A030003K21RikA0A1Y7VIM3 128 aa6.68□□□□□ -1.34
Tpm1-211ENSMUST00000113695 Lce1fB9EJP6 147 aa6.65□□□□□ -1.34
Tpm1-211ENSMUST00000113695 Lce1cQ9D1C5 147 aa6.65□□□□□ -1.34
Tpm1-211ENSMUST00000113695 Gm4553A0A1B0GSA9 284 aa6.53□□□□□ -1.36
Tpm1-211ENSMUST00000113695 Mt1P02802 61 aaKnown RBP6.53□□□□□ -1.36
Tpm1-211ENSMUST00000113695 Gm20538F6Z9R1 75 aa6.49□□□□□ -1.37
Tpm1-211ENSMUST00000113695 Lce3cQ91V05 98 aa6.49□□□□□ -1.37
Tpm1-211ENSMUST00000113695 Sprr2dO70555 85 aa6.48□□□□□ -1.37
Tpm1-211ENSMUST00000113695 Gm10100J3QK64 120 aa6.43□□□□□ -1.38
Tpm1-211ENSMUST00000113695 Krtap19-4Q925H7 84 aa6.4□□□□□ -1.38
Tpm1-211ENSMUST00000113695 Lce3dE9Q8V1 98 aa6.39□□□□□ -1.39
Tpm1-211ENSMUST00000113695 Gm6217A0A1Y7VJK9 128 aa6.36□□□□□ -1.39
Tpm1-211ENSMUST00000113695 Gm45337A0A1B0GS71 263 aa6.35□□□□□ -1.39
Tpm1-211ENSMUST00000113695 Gm10153A0A1B0GRL1 320 aa6.33□□□□□ -1.4
Tpm1-211ENSMUST00000113695 Gm11554B1AQB2 190 aa6.33□□□□□ -1.4
Tpm1-211ENSMUST00000113695 Lce3eF8VQJ0 98 aa6.28□□□□□ -1.4
Tpm1-211ENSMUST00000113695 Lce3fQ6PAI4 98 aa6.28□□□□□ -1.4
Tpm1-211ENSMUST00000113695 Gm2431E9Q8S1 172 aa6.28□□□□□ -1.4
Tpm1-211ENSMUST00000113695 Macf1Q9QXZ0 7354 aaKnown RBP6.27□□□□□ -1.41
Tpm1-211ENSMUST00000113695 ObscnA2AAJ9 8891 aaKnown RBP6.17□□□□□ -1.42
Tpm1-211ENSMUST00000113695 Gm40460A0A1B0GR10 244 aa6.14□□□□□ -1.43
Tpm1-211ENSMUST00000113695 Gm7579A0A1B0GRJ4 243 aa6.14□□□□□ -1.43
Tpm1-211ENSMUST00000113695 Krtap5-5Q2TA51 241 aa6.14□□□□□ -1.43
Tpm1-211ENSMUST00000113695 Krtap5-4Q62220 223 aa6.14□□□□□ -1.43
Tpm1-211ENSMUST00000113695 Kmt2dQ6PDK2 5588 aa6.12□□□□□ -1.43
Tpm1-211ENSMUST00000113695 4933428G20RikQ9D3X4 101 aa6.11□□□□□ -1.43
Tpm1-211ENSMUST00000113695 Ndufaf8A2AMZ4 74 aa6.06□□□□□ -1.44
Tpm1-211ENSMUST00000113695 Eppk1Q8R0W0 6548 aa6.03□□□□□ -1.44
Tpm1-211ENSMUST00000113695 Lce3aQ497I5 98 aa6.03□□□□□ -1.44
Tpm1-211ENSMUST00000113695 Mt3P28184 68 aa5.97□□□□□ -1.45
Tpm1-211ENSMUST00000113695 Hmcn1D3YXG0 5634 aa5.97□□□□□ -1.45
Tpm1-211ENSMUST00000113695 Gm39115A0A1B0GSH7 232 aa5.91□□□□□ -1.46
Tpm1-211ENSMUST00000113695 Gm10142J3KMP7 120 aa5.77□□□□□ -1.49
Tpm1-211ENSMUST00000113695 A0A286YCP9 139 aa5.74□□□□□ -1.49
Tpm1-211ENSMUST00000113695 Muc19Q6PZE0 7524 aa5.67□□□□□ -1.5
Tpm1-211ENSMUST00000113695 Sprr2hO70559 108 aa5.59□□□□□ -1.52
Tpm1-211ENSMUST00000113695 Gm11639A0A1D5RLM8 5808 aa5.58□□□□□ -1.52
Tpm1-211ENSMUST00000113695 DstQ91ZU6 7393 aaKnown RBP5.55□□□□□ -1.52
Tpm1-211ENSMUST00000113695 Sprr2fO70557 76 aa5.42□□□□□ -1.54
Tpm1-211ENSMUST00000113695 Gm9112A2AI92 75 aa5.38□□□□□ -1.55
Tpm1-211ENSMUST00000113695 Gm45618A0A1B0GSA0 219 aa5.37□□□□□ -1.55
Tpm1-211ENSMUST00000113695 Krtap4-16Q91W93 202 aa5.31□□□□□ -1.56
Tpm1-211ENSMUST00000113695 Sprr2eO70556 76 aa5.28□□□□□ -1.56
Tpm1-211ENSMUST00000113695 Gm10024A0A0A0MQA4 119 aa5.2□□□□□ -1.58
Tpm1-211ENSMUST00000113695 Gpr98Q8VHN7 6298 aaKnown RBP5.2□□□□□ -1.58
Tpm1-211ENSMUST00000113695 NebE9Q1W3 7152 aa5.16□□□□□ -1.58
Tpm1-211ENSMUST00000113695 AhnakE9Q616 5656 aaKnown RBP5.16□□□□□ -1.58
Tpm1-211ENSMUST00000113695 1110025L11RikO09048 78 aa4.81□□□□□ -1.64
Tpm1-211ENSMUST00000113695 Krtap6-5Q925H3 78 aa4.81□□□□□ -1.64
Tpm1-211ENSMUST00000113695 Gm29735A0A1B0GT06 219 aa4.63□□□□□ -1.67
Tpm1-211ENSMUST00000113695 Gm11567Q9D141 195 aa4.55□□□□□ -1.68
Tpm1-211ENSMUST00000113695 Muc16A0A140LJ72 8478 aa4.51□□□□□ -1.69
Tpm1-211ENSMUST00000113695 Gm10229O08631 77 aa4.29□□□□□ -1.72
Tpm1-211ENSMUST00000113695 Sprr2bO70554 98 aa4.01□□□□□ -1.77
Tpm1-211ENSMUST00000113695 Krtap21-1Q925H4 128 aa3.9□□□□□ -1.79
Tpm1-211ENSMUST00000113695 Krtap6-2O08884 159 aa3.75□□□□□ -1.81
Tpm1-211ENSMUST00000113695 Phgr1Q8K0G7 91 aa3.34□□□□□ -1.87
Tpm1-211ENSMUST00000113695 Krtap5-1Q64507 230 aa3.24□□□□□ -1.89
Tpm1-211ENSMUST00000113695 Gm4559A4IF42 199 aa3.21□□□□□ -1.9
Retrieved 80 of 22,080 RNA–protein pairs in 70.4 ms