RNA–Protein interactions for RNA: ENSMUST00000113687.7

Tpm1-207, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 962 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-207ENSMUST00000113687 Sprr2gO70558 76 aa4.62□□□□□ -1.67
Tpm1-207ENSMUST00000113687 Gm12216A0A1W2P827 62 aa4.6□□□□□ -1.67
Tpm1-207ENSMUST00000113687 Sox16Q62247 57 aa4.57□□□□□ -1.68
Tpm1-207ENSMUST00000113687 A0A286YCP9 139 aa4.56□□□□□ -1.68
Tpm1-207ENSMUST00000113687 Krtap20-2E9Q0A8 60 aa4.54□□□□□ -1.68
Tpm1-207ENSMUST00000113687 Romo1P60603 79 aa4.5□□□□□ -1.69
Tpm1-207ENSMUST00000113687 Gm3646F6S692 53 aa4.49□□□□□ -1.69
Tpm1-207ENSMUST00000113687 Krtap7-1Q9D3I6 87 aa4.46□□□□□ -1.7
Tpm1-207ENSMUST00000113687 2310046K23RikA0A0A6YVW6 87 aa4.44□□□□□ -1.7
Tpm1-207ENSMUST00000113687 Syne1Q6ZWR6 8799 aa4.4□□□□□ -1.7
Tpm1-207ENSMUST00000113687 Gm10272F7CZ33 110 aa4.39□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Lce1kJ3QP15 125 aa4.39□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Sprr2iO70560 76 aa4.38□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Eppk1Q8R0W0 6548 aa4.35□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Pcp4P63054 62 aa4.35□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Krtap5-2Q9D5Z7 189 aa4.35□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Lce3bQ9CQM7 98 aa4.34□□□□□ -1.71
Tpm1-207ENSMUST00000113687 Gm10337F7DEP7 55 aa4.25□□□□□ -1.73
Tpm1-207ENSMUST00000113687 Gm11568A2A4M2 211 aa4.24□□□□□ -1.73
Tpm1-207ENSMUST00000113687 Gm10100J3QK64 120 aa4.24□□□□□ -1.73
Tpm1-207ENSMUST00000113687 Krtap9-1Q64526 186 aa4.24□□□□□ -1.73
Tpm1-207ENSMUST00000113687 Gm11639A0A1D5RLM8 5808 aa4.2□□□□□ -1.74
Tpm1-207ENSMUST00000113687 Gm11554B1AQB2 190 aa4.19□□□□□ -1.74
Tpm1-207ENSMUST00000113687 Tnp1P10856 55 aa4.18□□□□□ -1.74
Tpm1-207ENSMUST00000113687 Lce1fB9EJP6 147 aa4.14□□□□□ -1.75
Tpm1-207ENSMUST00000113687 Lce1cQ9D1C5 147 aa4.14□□□□□ -1.75
Tpm1-207ENSMUST00000113687 Gm4553A0A1B0GSA9 284 aa4.13□□□□□ -1.75
Tpm1-207ENSMUST00000113687 Macf1Q9QXZ0 7354 aaKnown RBP4.11□□□□□ -1.75
Tpm1-207ENSMUST00000113687 Kmt2dQ6PDK2 5588 aa4.08□□□□□ -1.76
Tpm1-207ENSMUST00000113687 Gm40193A0A1B0GT39 78 aa4.06□□□□□ -1.76
Tpm1-207ENSMUST00000113687 Gm2431E9Q8S1 172 aa4.03□□□□□ -1.76
Tpm1-207ENSMUST00000113687 Gm11938Q9D3H4 131 aa4.01□□□□□ -1.77
Tpm1-207ENSMUST00000113687 Gpr98Q8VHN7 6298 aaKnown RBP4□□□□□ -1.77
Tpm1-207ENSMUST00000113687 Gm45337A0A1B0GS71 263 aa3.98□□□□□ -1.77
Tpm1-207ENSMUST00000113687 Mt1P02802 61 aaKnown RBP3.98□□□□□ -1.77
Tpm1-207ENSMUST00000113687 Gm10153A0A1B0GRL1 320 aa3.92□□□□□ -1.78
Tpm1-207ENSMUST00000113687 Lce3cQ91V05 98 aa3.91□□□□□ -1.78
Tpm1-207ENSMUST00000113687 Krtap19-4Q925H7 84 aa3.91□□□□□ -1.78
Tpm1-207ENSMUST00000113687 Gm45618A0A1B0GSA0 219 aa3.88□□□□□ -1.79
Tpm1-207ENSMUST00000113687 Muc19Q6PZE0 7524 aa3.87□□□□□ -1.79
Tpm1-207ENSMUST00000113687 Lce3dE9Q8V1 98 aa3.85□□□□□ -1.79
Tpm1-207ENSMUST00000113687 Hmcn1D3YXG0 5634 aa3.85□□□□□ -1.79
Tpm1-207ENSMUST00000113687 Gm40460A0A1B0GR10 244 aa3.83□□□□□ -1.8
Tpm1-207ENSMUST00000113687 Gm7579A0A1B0GRJ4 243 aa3.83□□□□□ -1.8
Tpm1-207ENSMUST00000113687 Krtap5-5Q2TA51 241 aa3.83□□□□□ -1.8
Tpm1-207ENSMUST00000113687 Krtap5-4Q62220 223 aa3.83□□□□□ -1.8
Tpm1-207ENSMUST00000113687 ObscnA2AAJ9 8891 aaKnown RBP3.78□□□□□ -1.8
Tpm1-207ENSMUST00000113687 Gm39115A0A1B0GSH7 232 aa3.77□□□□□ -1.81
Tpm1-207ENSMUST00000113687 Lce3eF8VQJ0 98 aa3.75□□□□□ -1.81
Tpm1-207ENSMUST00000113687 Lce3fQ6PAI4 98 aa3.75□□□□□ -1.81
Tpm1-207ENSMUST00000113687 Gm10142J3KMP7 120 aa3.73□□□□□ -1.81
Tpm1-207ENSMUST00000113687 Gm11567Q9D141 195 aa3.73□□□□□ -1.81
Tpm1-207ENSMUST00000113687 Mp68P56379 58 aa3.68□□□□□ -1.82
Tpm1-207ENSMUST00000113687 Gm29735A0A1B0GT06 219 aa3.67□□□□□ -1.82
Tpm1-207ENSMUST00000113687 DstQ91ZU6 7393 aaKnown RBP3.67□□□□□ -1.82
Tpm1-207ENSMUST00000113687 Mt3P28184 68 aa3.66□□□□□ -1.82
Tpm1-207ENSMUST00000113687 Sprr2dO70555 85 aa3.63□□□□□ -1.83
Tpm1-207ENSMUST00000113687 4933428G20RikQ9D3X4 101 aa3.61□□□□□ -1.83
Tpm1-207ENSMUST00000113687 Lce3aQ497I5 98 aa3.59□□□□□ -1.83
Tpm1-207ENSMUST00000113687 Krtap4-16Q91W93 202 aa3.57□□□□□ -1.84
Tpm1-207ENSMUST00000113687 NebE9Q1W3 7152 aa3.56□□□□□ -1.84
Tpm1-207ENSMUST00000113687 SvipQ3UZP4 77 aa3.55□□□□□ -1.84
Tpm1-207ENSMUST00000113687 Sprr2fO70557 76 aa3.5□□□□□ -1.85
Tpm1-207ENSMUST00000113687 AhnakE9Q616 5656 aaKnown RBP3.44□□□□□ -1.86
Tpm1-207ENSMUST00000113687 Gm20538F6Z9R1 75 aa3.38□□□□□ -1.87
Tpm1-207ENSMUST00000113687 Sprr2eO70556 76 aa3.26□□□□□ -1.89
Tpm1-207ENSMUST00000113687 Sprr2hO70559 108 aa3.15□□□□□ -1.91
Tpm1-207ENSMUST00000113687 Gm10024A0A0A0MQA4 119 aa3.13□□□□□ -1.91
Tpm1-207ENSMUST00000113687 1110025L11RikO09048 78 aa2.87□□□□□ -1.95
Tpm1-207ENSMUST00000113687 Krtap6-5Q925H3 78 aa2.87□□□□□ -1.95
Tpm1-207ENSMUST00000113687 Muc16A0A140LJ72 8478 aa2.86□□□□□ -1.95
Tpm1-207ENSMUST00000113687 Ndufaf8A2AMZ4 74 aa2.76□□□□□ -1.97
Tpm1-207ENSMUST00000113687 Gm10229O08631 77 aa2.57□□□□□ -2
Tpm1-207ENSMUST00000113687 Krtap5-1Q64507 230 aa2.54□□□□□ -2
Tpm1-207ENSMUST00000113687 Gm4559A4IF42 199 aa2.44□□□□□ -2.02
Tpm1-207ENSMUST00000113687 Krtap21-1Q925H4 128 aa2.32□□□□□ -2.04
Tpm1-207ENSMUST00000113687 Krtap6-2O08884 159 aa2.28□□□□□ -2.04
Tpm1-207ENSMUST00000113687 Sprr2bO70554 98 aa2.24□□□□□ -2.05
Tpm1-207ENSMUST00000113687 Gm9112A2AI92 75 aa2.01□□□□□ -2.09
Tpm1-207ENSMUST00000113687 Phgr1Q8K0G7 91 aa1.89□□□□□ -2.11
Retrieved 80 of 22,080 RNA–protein pairs in 114.4 ms