RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Mdn1A2ANY6 5589 aaKnown RBP3.52□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Gm10382Q3V0T5 144 aa3.51□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Krtap19-1Q925H2 87 aa3.5□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Krtap16-3Q8C1I6 86 aa3.49□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Gm11564A2A4L9 201 aa3.48□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Krtap5-4Q62220 223 aa3.48□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Krtap7-1Q9D3I6 87 aa3.47□□□□□ -1.85
Ccdc47-202ENSMUST00000106865 Gm17402F6Z0L5 76 aa3.46□□□□□ -1.86
Ccdc47-202ENSMUST00000106865 BC029722A0A0N4SW31 51 aa3.42□□□□□ -1.86
Ccdc47-202ENSMUST00000106865 Gm11568A2A4M2 211 aa3.38□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Ndufaf8A2AMZ4 74 aa3.37□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Fsip2A2ARZ3 6995 aa3.37□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Gm45337A0A1B0GS71 263 aa3.36□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Krtap13-1Q8K198 168 aa3.35□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Gm9112A2AI92 75 aa3.34□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Gm19426M0QWC7 77 aa3.34□□□□□ -1.87
Ccdc47-202ENSMUST00000106865 Krtap6-3A0A087WQL6 57 aa3.3□□□□□ -1.88
Ccdc47-202ENSMUST00000106865 CriptO70333 101 aa3.3□□□□□ -1.88
Ccdc47-202ENSMUST00000106865 Gm40193A0A1B0GT39 78 aa3.29□□□□□ -1.88
Ccdc47-202ENSMUST00000106865 Camk2n1Q6QWF9 78 aa3.29□□□□□ -1.88
Ccdc47-202ENSMUST00000106865 Mt4P47945 62 aa3.25□□□□□ -1.89
Ccdc47-202ENSMUST00000106865 Sprr2a3Q4KL71 83 aa3.24□□□□□ -1.89
Ccdc47-202ENSMUST00000106865 Sprr2a1Q9CQK8 83 aa3.24□□□□□ -1.89
Ccdc47-202ENSMUST00000106865 Krtap19-2Q925I0 141 aa3.21□□□□□ -1.9
Ccdc47-202ENSMUST00000106865 Lce3dE9Q8V1 98 aa3.14□□□□□ -1.91
Ccdc47-202ENSMUST00000106865 Lce3aQ497I5 98 aa3.14□□□□□ -1.91
Ccdc47-202ENSMUST00000106865 Gm6358A0A087WPH4 74 aa3.11□□□□□ -1.91
Ccdc47-202ENSMUST00000106865 Spink7Q6IE32 76 aa3.1□□□□□ -1.91
Ccdc47-202ENSMUST00000106865 Sprr2kO70562 68 aa3.07□□□□□ -1.92
Ccdc47-202ENSMUST00000106865 Gm4559A4IF42 199 aa3.03□□□□□ -1.92
Ccdc47-202ENSMUST00000106865 Krtap20-2E9Q0A8 60 aa3.02□□□□□ -1.93
Ccdc47-202ENSMUST00000106865 Eppk1Q8R0W0 6548 aa2.97□□□□□ -1.93
Ccdc47-202ENSMUST00000106865 Gm7579A0A1B0GRJ4 243 aa2.97□□□□□ -1.93
Ccdc47-202ENSMUST00000106865 Krtap19-9aF8WH65 55 aa2.95□□□□□ -1.94
Ccdc47-202ENSMUST00000106865 Tnp1P10856 55 aa2.93□□□□□ -1.94
Ccdc47-202ENSMUST00000106865 Krtap5-1Q64507 230 aa2.92□□□□□ -1.94
Ccdc47-202ENSMUST00000106865 Krtap5-2Q9D5Z7 189 aa2.92□□□□□ -1.94
Ccdc47-202ENSMUST00000106865 Sprr2gO70558 76 aa2.9□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Gm4553A0A1B0GSA9 284 aa2.87□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Krtap8-1O08633 61 aa2.87□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Gm11639A0A1D5RLM8 5808 aa2.86□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 2310046K23RikA0A0A6YVW6 87 aa2.86□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Mt2P02798 61 aa2.85□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Lce3fQ6PAI4 98 aa2.85□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Lce3cQ91V05 98 aa2.85□□□□□ -1.95
Ccdc47-202ENSMUST00000106865 Krtap19-9bQ99NG9 58 aa2.81□□□□□ -1.96
Ccdc47-202ENSMUST00000106865 Gm10229O08631 77 aa2.76□□□□□ -1.97
Ccdc47-202ENSMUST00000106865 Macf1Q9QXZ0 7354 aaKnown RBP2.75□□□□□ -1.97
Ccdc47-202ENSMUST00000106865 Gpr98Q8VHN7 6298 aaKnown RBP2.75□□□□□ -1.97
Ccdc47-202ENSMUST00000106865 Krtap22-2J3QNX6 67 aa2.71□□□□□ -1.98
Ccdc47-202ENSMUST00000106865 Muc19Q6PZE0 7524 aa2.67□□□□□ -1.98
Ccdc47-202ENSMUST00000106865 Kmt2dQ6PDK2 5588 aa2.65□□□□□ -1.99
Ccdc47-202ENSMUST00000106865 4933428G20RikQ9D3X4 101 aa2.64□□□□□ -1.99
Ccdc47-202ENSMUST00000106865 Sprr2dO70555 85 aa2.49□□□□□ -2.01
Ccdc47-202ENSMUST00000106865 Sprr2iO70560 76 aa2.49□□□□□ -2.01
Ccdc47-202ENSMUST00000106865 DstQ91ZU6 7393 aaKnown RBP2.45□□□□□ -2.02
Ccdc47-202ENSMUST00000106865 Lce3eF8VQJ0 98 aa2.44□□□□□ -2.02
Ccdc47-202ENSMUST00000106865 NebE9Q1W3 7152 aa2.43□□□□□ -2.02
Ccdc47-202ENSMUST00000106865 Hmcn1D3YXG0 5634 aa2.42□□□□□ -2.02
Ccdc47-202ENSMUST00000106865 Syne1Q6ZWR6 8799 aa2.42□□□□□ -2.02
Ccdc47-202ENSMUST00000106865 Gm11938Q9D3H4 131 aa2.4□□□□□ -2.03
Ccdc47-202ENSMUST00000106865 Krtap4-16Q91W93 202 aa2.37□□□□□ -2.03
Ccdc47-202ENSMUST00000106865 Krtap6-5Q925H3 78 aa2.36□□□□□ -2.03
Ccdc47-202ENSMUST00000106865 Krtap19-4Q925H7 84 aa2.33□□□□□ -2.04
Ccdc47-202ENSMUST00000106865 Gm40460A0A1B0GR10 244 aa2.32□□□□□ -2.04
Ccdc47-202ENSMUST00000106865 Krtap5-5Q2TA51 241 aa2.32□□□□□ -2.04
Ccdc47-202ENSMUST00000106865 Lce3bQ9CQM7 98 aa2.25□□□□□ -2.05
Ccdc47-202ENSMUST00000106865 AhnakE9Q616 5656 aaKnown RBP2.21□□□□□ -2.06
Ccdc47-202ENSMUST00000106865 Sprr2fO70557 76 aa2.19□□□□□ -2.06
Ccdc47-202ENSMUST00000106865 Sprr2hO70559 108 aa2.14□□□□□ -2.07
Ccdc47-202ENSMUST00000106865 Sprr2eO70556 76 aa2.13□□□□□ -2.07
Ccdc47-202ENSMUST00000106865 Mt1P02802 61 aaKnown RBP2.12□□□□□ -2.07
Ccdc47-202ENSMUST00000106865 ObscnA2AAJ9 8891 aaKnown RBP2.12□□□□□ -2.07
Ccdc47-202ENSMUST00000106865 Krtap6-2O08884 159 aa2□□□□□ -2.09
Ccdc47-202ENSMUST00000106865 Gm10024A0A0A0MQA4 119 aa1.96□□□□□ -2.1
Ccdc47-202ENSMUST00000106865 Krtap21-1Q925H4 128 aa1.92□□□□□ -2.1
Ccdc47-202ENSMUST00000106865 1110025L11RikO09048 78 aa1.9□□□□□ -2.11
Ccdc47-202ENSMUST00000106865 Muc16A0A140LJ72 8478 aa1.78□□□□□ -2.12
Ccdc47-202ENSMUST00000106865 Sprr2bO70554 98 aa1.53□□□□□ -2.16
Ccdc47-202ENSMUST00000106865 Phgr1Q8K0G7 91 aa1.25□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 78.3 ms