RNA–Protein interactions for RNA: ENSMUST00000098098.8

Rnf38-202, Transcript of E3 ubiquitin-protein ligase RNF38, mousemouse

TSL 1 (best) BASIC

Gene Rnf38, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38-202ENSMUST00000098098 Krtap4-1Q3UUY3 169 aa4.78□□□□□ -1.64
Rnf38-202ENSMUST00000098098 Krtap19-4Q925H7 84 aa4.75□□□□□ -1.65
Rnf38-202ENSMUST00000098098 Fsip2A2ARZ3 6995 aa4.74□□□□□ -1.65
Rnf38-202ENSMUST00000098098 Gm11596B1AQB0 205 aa4.68□□□□□ -1.66
Rnf38-202ENSMUST00000098098 Lce1eQ9D139 143 aa4.68□□□□□ -1.66
Rnf38-202ENSMUST00000098098 Gm11564A2A4L9 201 aa4.65□□□□□ -1.66
Rnf38-202ENSMUST00000098098 Gm11563B1AQ90 168 aa4.65□□□□□ -1.66
Rnf38-202ENSMUST00000098098 Gm11595B1AQA7 289 aa4.65□□□□□ -1.66
Rnf38-202ENSMUST00000098098 Krtap4-8B1AQA8 209 aa4.65□□□□□ -1.66
Rnf38-202ENSMUST00000098098 Syne1Q6ZWR6 8799 aa4.64□□□□□ -1.67
Rnf38-202ENSMUST00000098098 Krtap4-9B1AQA9 244 aa4.62□□□□□ -1.67
Rnf38-202ENSMUST00000098098 Sprr2dO70555 85 aa4.61□□□□□ -1.67
Rnf38-202ENSMUST00000098098 Gm11938Q9D3H4 131 aa4.61□□□□□ -1.67
Rnf38-202ENSMUST00000098098 Syne2Q6ZWQ0 6874 aaKnown RBP4.56□□□□□ -1.68
Rnf38-202ENSMUST00000098098 2300003K06RikA2A4M0 262 aa4.54□□□□□ -1.68
Rnf38-202ENSMUST00000098098 Gm11562A0PK51 136 aa4.5□□□□□ -1.69
Rnf38-202ENSMUST00000098098 Gm6217A0A1Y7VJK9 128 aa4.49□□□□□ -1.69
Rnf38-202ENSMUST00000098098 Krtap4-13Q9D7P3 165 aa4.49□□□□□ -1.69
Rnf38-202ENSMUST00000098098 Gm10024A0A0A0MQA4 119 aa4.45□□□□□ -1.7
Rnf38-202ENSMUST00000098098 Krtap4-7Q9D732 168 aa4.45□□□□□ -1.7
Rnf38-202ENSMUST00000098098 Lce1kJ3QP15 125 aa4.38□□□□□ -1.71
Rnf38-202ENSMUST00000098098 Sprr2eO70556 76 aa4.37□□□□□ -1.71
Rnf38-202ENSMUST00000098098 Krtap31-1Q9D644 177 aa4.31□□□□□ -1.72
Rnf38-202ENSMUST00000098098 Sprr2hO70559 108 aa4.27□□□□□ -1.73
Rnf38-202ENSMUST00000098098 Krtap28-10A0A1Y7VP58 119 aa4.26□□□□□ -1.73
Rnf38-202ENSMUST00000098098 A0A1Y7VJH8 109 aa4.25□□□□□ -1.73
Rnf38-202ENSMUST00000098098 Lce1a1Q9CQH5 143 aa4.24□□□□□ -1.73
Rnf38-202ENSMUST00000098098 Muc16A0A140LJ72 8478 aa4.19□□□□□ -1.74
Rnf38-202ENSMUST00000098098 Sprr2fO70557 76 aa4.19□□□□□ -1.74
Rnf38-202ENSMUST00000098098 Krtap28-13A0A087WQP5 138 aa4.11□□□□□ -1.75
Rnf38-202ENSMUST00000098098 A0A1Y7VJ07 166 aa4.11□□□□□ -1.75
Rnf38-202ENSMUST00000098098 Gm11555B1AQ89 175 aa4.09□□□□□ -1.75
Rnf38-202ENSMUST00000098098 Krtap4-16Q91W93 202 aa4.07□□□□□ -1.76
Rnf38-202ENSMUST00000098098 Krtap6-3A0A087WQL6 57 aa4.04□□□□□ -1.76
Rnf38-202ENSMUST00000098098 ObscnA2AAJ9 8891 aaKnown RBP4.03□□□□□ -1.76
Rnf38-202ENSMUST00000098098 Mt3P28184 68 aa4.02□□□□□ -1.77
Rnf38-202ENSMUST00000098098 Mt1P02802 61 aaKnown RBP4.01□□□□□ -1.77
Rnf38-202ENSMUST00000098098 Gm7544A0A1Y7VJ58 118 aa4□□□□□ -1.77
Rnf38-202ENSMUST00000098098 Krtap20-2E9Q0A8 60 aa3.99□□□□□ -1.77
Rnf38-202ENSMUST00000098098 A030005L19RikA0A1Y7VIU2 113 aa3.99□□□□□ -1.77
Rnf38-202ENSMUST00000098098 Macf1Q9QXZ0 7354 aaKnown RBP3.99□□□□□ -1.77
Rnf38-202ENSMUST00000098098 A030005K14RikA0A1Y7VNY1 122 aa3.98□□□□□ -1.77
Rnf38-202ENSMUST00000098098 Gm11554B1AQB2 190 aa3.89□□□□□ -1.79
Rnf38-202ENSMUST00000098098 A030014E15RikA0A1Y7VJV2 120 aa3.66□□□□□ -1.82
Rnf38-202ENSMUST00000098098 DstQ91ZU6 7393 aaKnown RBP3.61□□□□□ -1.83
Rnf38-202ENSMUST00000098098 Muc19Q6PZE0 7524 aa3.53□□□□□ -1.84
Rnf38-202ENSMUST00000098098 NebE9Q1W3 7152 aa3.52□□□□□ -1.85
Rnf38-202ENSMUST00000098098 Kmt2dQ6PDK2 5588 aa3.5□□□□□ -1.85
Rnf38-202ENSMUST00000098098 Gm11568A2A4M2 211 aa3.5□□□□□ -1.85
Rnf38-202ENSMUST00000098098 Krtap9-1Q64526 186 aa3.5□□□□□ -1.85
Rnf38-202ENSMUST00000098098 Eppk1Q8R0W0 6548 aa3.34□□□□□ -1.87
Rnf38-202ENSMUST00000098098 Gm11559Q9D3H7 191 aa3.32□□□□□ -1.88
Rnf38-202ENSMUST00000098098 Krtap5-2Q9D5Z7 189 aa3.24□□□□□ -1.89
Rnf38-202ENSMUST00000098098 1110025L11RikO09048 78 aa3.21□□□□□ -1.9
Rnf38-202ENSMUST00000098098 Krtap6-5Q925H3 78 aa3.21□□□□□ -1.9
Rnf38-202ENSMUST00000098098 Sprr2bO70554 98 aa3.2□□□□□ -1.9
Rnf38-202ENSMUST00000098098 Hmcn1D3YXG0 5634 aa3.16□□□□□ -1.9
Rnf38-202ENSMUST00000098098 Gm11639A0A1D5RLM8 5808 aa3.08□□□□□ -1.92
Rnf38-202ENSMUST00000098098 Gpr98Q8VHN7 6298 aaKnown RBP3.03□□□□□ -1.93
Rnf38-202ENSMUST00000098098 Gm4553A0A1B0GSA9 284 aa3.01□□□□□ -1.93
Rnf38-202ENSMUST00000098098 A0A286YCP9 139 aa3.01□□□□□ -1.93
Rnf38-202ENSMUST00000098098 Gm10229O08631 77 aa2.95□□□□□ -1.94
Rnf38-202ENSMUST00000098098 Gm10153A0A1B0GRL1 320 aa2.93□□□□□ -1.94
Rnf38-202ENSMUST00000098098 Gm2431E9Q8S1 172 aa2.9□□□□□ -1.95
Rnf38-202ENSMUST00000098098 Krtap31-2Q8CAY5 177 aa2.89□□□□□ -1.95
Rnf38-202ENSMUST00000098098 Gm45337A0A1B0GS71 263 aa2.77□□□□□ -1.97
Rnf38-202ENSMUST00000098098 AhnakE9Q616 5656 aaKnown RBP2.73□□□□□ -1.97
Rnf38-202ENSMUST00000098098 Phgr1Q8K0G7 91 aa2.71□□□□□ -1.98
Rnf38-202ENSMUST00000098098 Gm40460A0A1B0GR10 244 aa2.7□□□□□ -1.98
Rnf38-202ENSMUST00000098098 Gm7579A0A1B0GRJ4 243 aa2.7□□□□□ -1.98
Rnf38-202ENSMUST00000098098 Krtap5-5Q2TA51 241 aa2.7□□□□□ -1.98
Rnf38-202ENSMUST00000098098 Krtap5-4Q62220 223 aa2.7□□□□□ -1.98
Rnf38-202ENSMUST00000098098 Gm39115A0A1B0GSH7 232 aa2.5□□□□□ -2.01
Rnf38-202ENSMUST00000098098 Krtap6-2O08884 159 aa2.44□□□□□ -2.02
Rnf38-202ENSMUST00000098098 Krtap21-1Q925H4 128 aa2.41□□□□□ -2.02
Rnf38-202ENSMUST00000098098 Gm11567Q9D141 195 aa2.28□□□□□ -2.04
Rnf38-202ENSMUST00000098098 Gm45618A0A1B0GSA0 219 aa2.12□□□□□ -2.07
Rnf38-202ENSMUST00000098098 Gm29735A0A1B0GT06 219 aa2.03□□□□□ -2.08
Rnf38-202ENSMUST00000098098 Krtap5-1Q64507 230 aa1.47□□□□□ -2.17
Rnf38-202ENSMUST00000098098 Gm4559A4IF42 199 aa1.18□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 89.4 ms