RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 Gm11554B1AQB2 190 aa8.34□□□□□ -1.07
Ccdc50-202ENSMUST00000096127 Lce3bQ9CQM7 98 aa8.34□□□□□ -1.07
Ccdc50-202ENSMUST00000096127 Gm3646F6S692 53 aa8.33□□□□□ -1.08
Ccdc50-202ENSMUST00000096127 Gm10272F7CZ33 110 aa8.33□□□□□ -1.08
Ccdc50-202ENSMUST00000096127 Gm11639A0A1D5RLM8 5808 aa8.29□□□□□ -1.08
Ccdc50-202ENSMUST00000096127 Macf1Q9QXZ0 7354 aaKnown RBP8.28□□□□□ -1.08
Ccdc50-202ENSMUST00000096127 Gm11568A2A4M2 211 aa8.21□□□□□ -1.1
Ccdc50-202ENSMUST00000096127 Krtap9-1Q64526 186 aa8.21□□□□□ -1.1
Ccdc50-202ENSMUST00000096127 Gm4553A0A1B0GSA9 284 aa8.18□□□□□ -1.1
Ccdc50-202ENSMUST00000096127 Syne1Q6ZWR6 8799 aa8.16□□□□□ -1.1
Ccdc50-202ENSMUST00000096127 Kmt2dQ6PDK2 5588 aa8.13□□□□□ -1.11
Ccdc50-202ENSMUST00000096127 Tnp1P10856 55 aa8.04□□□□□ -1.12
Ccdc50-202ENSMUST00000096127 Lce1fB9EJP6 147 aa7.96□□□□□ -1.14
Ccdc50-202ENSMUST00000096127 Lce1cQ9D1C5 147 aa7.96□□□□□ -1.14
Ccdc50-202ENSMUST00000096127 Gpr98Q8VHN7 6298 aaKnown RBP7.95□□□□□ -1.14
Ccdc50-202ENSMUST00000096127 Muc19Q6PZE0 7524 aa7.92□□□□□ -1.14
Ccdc50-202ENSMUST00000096127 Gm10337F7DEP7 55 aa7.89□□□□□ -1.15
Ccdc50-202ENSMUST00000096127 Gm45337A0A1B0GS71 263 aa7.88□□□□□ -1.15
Ccdc50-202ENSMUST00000096127 Gm2431E9Q8S1 172 aa7.87□□□□□ -1.15
Ccdc50-202ENSMUST00000096127 Gm40193A0A1B0GT39 78 aa7.85□□□□□ -1.15
Ccdc50-202ENSMUST00000096127 Pcp4P63054 62 aa7.83□□□□□ -1.16
Ccdc50-202ENSMUST00000096127 Gm11938Q9D3H4 131 aa7.79□□□□□ -1.16
Ccdc50-202ENSMUST00000096127 Gm10153A0A1B0GRL1 320 aa7.72□□□□□ -1.17
Ccdc50-202ENSMUST00000096127 Mt1P02802 61 aaKnown RBP7.72□□□□□ -1.17
Ccdc50-202ENSMUST00000096127 Krtap19-4Q925H7 84 aa7.62□□□□□ -1.19
Ccdc50-202ENSMUST00000096127 Gm40460A0A1B0GR10 244 aa7.61□□□□□ -1.19
Ccdc50-202ENSMUST00000096127 Gm7579A0A1B0GRJ4 243 aa7.61□□□□□ -1.19
Ccdc50-202ENSMUST00000096127 Krtap5-5Q2TA51 241 aa7.61□□□□□ -1.19
Ccdc50-202ENSMUST00000096127 Krtap5-4Q62220 223 aa7.61□□□□□ -1.19
Ccdc50-202ENSMUST00000096127 Hmcn1D3YXG0 5634 aa7.5□□□□□ -1.21
Ccdc50-202ENSMUST00000096127 Lce3cQ91V05 98 aa7.5□□□□□ -1.21
Ccdc50-202ENSMUST00000096127 Gm39115A0A1B0GSH7 232 aa7.46□□□□□ -1.22
Ccdc50-202ENSMUST00000096127 DstQ91ZU6 7393 aaKnown RBP7.41□□□□□ -1.22
Ccdc50-202ENSMUST00000096127 Lce3dE9Q8V1 98 aa7.41□□□□□ -1.22
Ccdc50-202ENSMUST00000096127 NebE9Q1W3 7152 aa7.32□□□□□ -1.24
Ccdc50-202ENSMUST00000096127 A0A1Y7VLE6 161 aa7.31□□□□□ -1.24
Ccdc50-202ENSMUST00000096127 Krtap28-10A0A1Y7VP58 119 aa7.28□□□□□ -1.24
Ccdc50-202ENSMUST00000096127 Krtap28-13A0A087WQP5 138 aa7.27□□□□□ -1.25
Ccdc50-202ENSMUST00000096127 Lce3eF8VQJ0 98 aa7.19□□□□□ -1.26
Ccdc50-202ENSMUST00000096127 Lce3fQ6PAI4 98 aa7.19□□□□□ -1.26
Ccdc50-202ENSMUST00000096127 Krtap4-16Q91W93 202 aa7.18□□□□□ -1.26
Ccdc50-202ENSMUST00000096127 A030005K14RikA0A1Y7VNY1 122 aa7.17□□□□□ -1.26
Ccdc50-202ENSMUST00000096127 Mt3P28184 68 aa7.14□□□□□ -1.27
Ccdc50-202ENSMUST00000096127 Sprr2dO70555 85 aa7.02□□□□□ -1.29
Ccdc50-202ENSMUST00000096127 ObscnA2AAJ9 8891 aaKnown RBP7□□□□□ -1.29
Ccdc50-202ENSMUST00000096127 4933428G20RikQ9D3X4 101 aa6.97□□□□□ -1.29
Ccdc50-202ENSMUST00000096127 Gm45618A0A1B0GSA0 219 aa6.96□□□□□ -1.3
Ccdc50-202ENSMUST00000096127 Sprr2fO70557 76 aa6.94□□□□□ -1.3
Ccdc50-202ENSMUST00000096127 Mp68P56379 58 aa6.88□□□□□ -1.31
Ccdc50-202ENSMUST00000096127 Lce3aQ497I5 98 aa6.87□□□□□ -1.31
Ccdc50-202ENSMUST00000096127 AhnakE9Q616 5656 aaKnown RBP6.8□□□□□ -1.32
Ccdc50-202ENSMUST00000096127 Gm10100J3QK64 120 aa6.79□□□□□ -1.32
Ccdc50-202ENSMUST00000096127 A0A1Y7VJ07 166 aa6.58□□□□□ -1.36
Ccdc50-202ENSMUST00000096127 Gm20538F6Z9R1 75 aa6.57□□□□□ -1.36
Ccdc50-202ENSMUST00000096127 A030014E15RikA0A1Y7VJV2 120 aa6.53□□□□□ -1.36
Ccdc50-202ENSMUST00000096127 Gm7544A0A1Y7VJ58 118 aa6.45□□□□□ -1.38
Ccdc50-202ENSMUST00000096127 Sprr2eO70556 76 aa6.26□□□□□ -1.41
Ccdc50-202ENSMUST00000096127 Gm10142J3KMP7 120 aa6.18□□□□□ -1.42
Ccdc50-202ENSMUST00000096127 Gm10024A0A0A0MQA4 119 aa6.16□□□□□ -1.42
Ccdc50-202ENSMUST00000096127 SvipQ3UZP4 77 aa6.11□□□□□ -1.43
Ccdc50-202ENSMUST00000096127 Sprr2hO70559 108 aa6.02□□□□□ -1.45
Ccdc50-202ENSMUST00000096127 A030003K21RikA0A1Y7VIM3 128 aa5.84□□□□□ -1.47
Ccdc50-202ENSMUST00000096127 Krtap31-2Q8CAY5 177 aa5.81□□□□□ -1.48
Ccdc50-202ENSMUST00000096127 Gm29735A0A1B0GT06 219 aa5.63□□□□□ -1.51
Ccdc50-202ENSMUST00000096127 1110025L11RikO09048 78 aa5.57□□□□□ -1.52
Ccdc50-202ENSMUST00000096127 Krtap6-5Q925H3 78 aa5.57□□□□□ -1.52
Ccdc50-202ENSMUST00000096127 Muc16A0A140LJ72 8478 aa5.55□□□□□ -1.52
Ccdc50-202ENSMUST00000096127 Gm6217A0A1Y7VJK9 128 aa5.54□□□□□ -1.52
Ccdc50-202ENSMUST00000096127 Gm11567Q9D141 195 aa5.25□□□□□ -1.57
Ccdc50-202ENSMUST00000096127 A0A286YCP9 139 aa5.22□□□□□ -1.57
Ccdc50-202ENSMUST00000096127 Krtap31-1Q9D644 177 aa5.15□□□□□ -1.59
Ccdc50-202ENSMUST00000096127 Gm10229O08631 77 aa5□□□□□ -1.61
Ccdc50-202ENSMUST00000096127 Ndufaf8A2AMZ4 74 aa4.94□□□□□ -1.62
Ccdc50-202ENSMUST00000096127 Krtap21-1Q925H4 128 aa4.51□□□□□ -1.69
Ccdc50-202ENSMUST00000096127 Krtap6-2O08884 159 aa4.45□□□□□ -1.7
Ccdc50-202ENSMUST00000096127 Krtap5-1Q64507 230 aa4.4□□□□□ -1.71
Ccdc50-202ENSMUST00000096127 Sprr2bO70554 98 aa4.37□□□□□ -1.71
Ccdc50-202ENSMUST00000096127 Phgr1Q8K0G7 91 aa3.64□□□□□ -1.83
Ccdc50-202ENSMUST00000096127 Gm9112A2AI92 75 aa3.5□□□□□ -1.85
Ccdc50-202ENSMUST00000096127 Gm4559A4IF42 199 aa3.23□□□□□ -1.89
Retrieved 80 of 22,080 RNA–protein pairs in 13.1 ms