RNA–Protein interactions for RNA: ENSMUST00000087557.11

Tspan6-201, Transcript of Tetraspanin-6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tspan6, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6-201ENSMUST00000087557 Krtap1-4Q3V2D6 188 aa4.13□□□□□ -1.75
Tspan6-201ENSMUST00000087557 Spink7Q6IE32 76 aa4.13□□□□□ -1.75
Tspan6-201ENSMUST00000087557 Lce1fB9EJP6 147 aa4.11□□□□□ -1.75
Tspan6-201ENSMUST00000087557 Gm45337A0A1B0GS71 263 aa4.1□□□□□ -1.75
Tspan6-201ENSMUST00000087557 Camk2n1Q6QWF9 78 aa4.07□□□□□ -1.76
Tspan6-201ENSMUST00000087557 SspoQ8CG65 4998 aa4.01□□□□□ -1.77
Tspan6-201ENSMUST00000087557 Syne2Q6ZWQ0 6874 aaKnown RBP3.98□□□□□ -1.77
Tspan6-201ENSMUST00000087557 Krtap5-4Q62220 223 aa3.97□□□□□ -1.77
Tspan6-201ENSMUST00000087557 Gm10153A0A1B0GRL1 320 aa3.95□□□□□ -1.78
Tspan6-201ENSMUST00000087557 Gm9112A2AI92 75 aa3.91□□□□□ -1.78
Tspan6-201ENSMUST00000087557 Tnp1P10856 55 aa3.9□□□□□ -1.79
Tspan6-201ENSMUST00000087557 Gm11596B1AQB0 205 aa3.89□□□□□ -1.79
Tspan6-201ENSMUST00000087557 Krtap4-6Q3V4B7 195 aa3.84□□□□□ -1.8
Tspan6-201ENSMUST00000087557 Krtap19-2Q925I0 141 aa3.81□□□□□ -1.8
Tspan6-201ENSMUST00000087557 Krtap19-9aF8WH65 55 aa3.79□□□□□ -1.8
Tspan6-201ENSMUST00000087557 Muc5bE9Q5I3 4800 aa3.76□□□□□ -1.81
Tspan6-201ENSMUST00000087557 2310046K23RikA0A0A6YVW6 87 aa3.72□□□□□ -1.81
Tspan6-201ENSMUST00000087557 Krtap8-1O08633 61 aa3.71□□□□□ -1.81
Tspan6-201ENSMUST00000087557 Mdn1A2ANY6 5589 aaKnown RBP3.7□□□□□ -1.82
Tspan6-201ENSMUST00000087557 Gm11564A2A4L9 201 aa3.68□□□□□ -1.82
Tspan6-201ENSMUST00000087557 Krtap4-8B1AQA8 209 aa3.68□□□□□ -1.82
Tspan6-201ENSMUST00000087557 Krtap9-1Q64526 186 aa3.66□□□□□ -1.82
Tspan6-201ENSMUST00000087557 Gm6358A0A087WPH4 74 aa3.66□□□□□ -1.82
Tspan6-201ENSMUST00000087557 Krtap19-9bQ99NG9 58 aa3.63□□□□□ -1.83
Tspan6-201ENSMUST00000087557 Krtap5-1Q64507 230 aa3.61□□□□□ -1.83
Tspan6-201ENSMUST00000087557 Lce1iQ9D6P5 149 aa3.6□□□□□ -1.83
Tspan6-201ENSMUST00000087557 Gm4553A0A1B0GSA9 284 aa3.57□□□□□ -1.84
Tspan6-201ENSMUST00000087557 Lce1a2Q9D1K4 149 aa3.57□□□□□ -1.84
Tspan6-201ENSMUST00000087557 Mt4P47945 62 aa3.53□□□□□ -1.84
Tspan6-201ENSMUST00000087557 Gm4559A4IF42 199 aa3.51□□□□□ -1.85
Tspan6-201ENSMUST00000087557 Fsip2A2ARZ3 6995 aa3.49□□□□□ -1.85
Tspan6-201ENSMUST00000087557 Mt2P02798 61 aa3.47□□□□□ -1.85
Tspan6-201ENSMUST00000087557 Krtap9-3Q3V2C1 136 aa3.46□□□□□ -1.86
Tspan6-201ENSMUST00000087557 Sprr2kO70562 68 aa3.43□□□□□ -1.86
Tspan6-201ENSMUST00000087557 Krtap6-3A0A087WQL6 57 aa3.42□□□□□ -1.86
Tspan6-201ENSMUST00000087557 Krtap22-2J3QNX6 67 aa3.32□□□□□ -1.88
Tspan6-201ENSMUST00000087557 Sprr2gO70558 76 aa3.3□□□□□ -1.88
Tspan6-201ENSMUST00000087557 4933428G20RikQ9D3X4 101 aa3.3□□□□□ -1.88
Tspan6-201ENSMUST00000087557 Eppk1Q8R0W0 6548 aa3.25□□□□□ -1.89
Tspan6-201ENSMUST00000087557 Sprr2dO70555 85 aa3.24□□□□□ -1.89
Tspan6-201ENSMUST00000087557 Gm11568A2A4M2 211 aa3.23□□□□□ -1.89
Tspan6-201ENSMUST00000087557 Krtap5-2Q9D5Z7 189 aa3.22□□□□□ -1.89
Tspan6-201ENSMUST00000087557 Gpr98Q8VHN7 6298 aaKnown RBP3.2□□□□□ -1.9
Tspan6-201ENSMUST00000087557 Gm11938Q9D3H4 131 aa3.2□□□□□ -1.9
Tspan6-201ENSMUST00000087557 Krtap5-5Q2TA51 241 aa3.17□□□□□ -1.9
Tspan6-201ENSMUST00000087557 Hmcn1D3YXG0 5634 aa3.14□□□□□ -1.91
Tspan6-201ENSMUST00000087557 Gm11639A0A1D5RLM8 5808 aa3.11□□□□□ -1.91
Tspan6-201ENSMUST00000087557 Krtap20-2E9Q0A8 60 aa3.1□□□□□ -1.91
Tspan6-201ENSMUST00000087557 Krtap19-4Q925H7 84 aa3.01□□□□□ -1.93
Tspan6-201ENSMUST00000087557 Sprr2iO70560 76 aa2.95□□□□□ -1.94
Tspan6-201ENSMUST00000087557 Gm7579A0A1B0GRJ4 243 aa2.94□□□□□ -1.94
Tspan6-201ENSMUST00000087557 Macf1Q9QXZ0 7354 aaKnown RBP2.92□□□□□ -1.94
Tspan6-201ENSMUST00000087557 Lce3bQ9CQM7 98 aa2.92□□□□□ -1.94
Tspan6-201ENSMUST00000087557 Gm40460A0A1B0GR10 244 aa2.88□□□□□ -1.95
Tspan6-201ENSMUST00000087557 DstQ91ZU6 7393 aaKnown RBP2.85□□□□□ -1.95
Tspan6-201ENSMUST00000087557 Sprr2hO70559 108 aa2.82□□□□□ -1.96
Tspan6-201ENSMUST00000087557 Sprr2eO70556 76 aa2.82□□□□□ -1.96
Tspan6-201ENSMUST00000087557 Lce3cQ91V05 98 aa2.79□□□□□ -1.96
Tspan6-201ENSMUST00000087557 Lce3dE9Q8V1 98 aa2.78□□□□□ -1.96
Tspan6-201ENSMUST00000087557 Sprr2fO70557 76 aa2.77□□□□□ -1.97
Tspan6-201ENSMUST00000087557 Syne1Q6ZWR6 8799 aa2.76□□□□□ -1.97
Tspan6-201ENSMUST00000087557 Lce3eF8VQJ0 98 aa2.73□□□□□ -1.97
Tspan6-201ENSMUST00000087557 Lce3aQ497I5 98 aa2.73□□□□□ -1.97
Tspan6-201ENSMUST00000087557 Lce3fQ6PAI4 98 aa2.73□□□□□ -1.97
Tspan6-201ENSMUST00000087557 Kmt2dQ6PDK2 5588 aa2.71□□□□□ -1.98
Tspan6-201ENSMUST00000087557 Muc19Q6PZE0 7524 aa2.63□□□□□ -1.99
Tspan6-201ENSMUST00000087557 Mt1P02802 61 aaKnown RBP2.59□□□□□ -1.99
Tspan6-201ENSMUST00000087557 ObscnA2AAJ9 8891 aaKnown RBP2.57□□□□□ -2
Tspan6-201ENSMUST00000087557 NebE9Q1W3 7152 aa2.49□□□□□ -2.01
Tspan6-201ENSMUST00000087557 Krtap4-16Q91W93 202 aa2.46□□□□□ -2.02
Tspan6-201ENSMUST00000087557 Gm10229O08631 77 aa2.41□□□□□ -2.02
Tspan6-201ENSMUST00000087557 Gm10024A0A0A0MQA4 119 aa2.38□□□□□ -2.03
Tspan6-201ENSMUST00000087557 AhnakE9Q616 5656 aaKnown RBP2.27□□□□□ -2.05
Tspan6-201ENSMUST00000087557 1110025L11RikO09048 78 aa1.98□□□□□ -2.09
Tspan6-201ENSMUST00000087557 Krtap6-5Q925H3 78 aa1.98□□□□□ -2.09
Tspan6-201ENSMUST00000087557 Sprr2bO70554 98 aa1.95□□□□□ -2.1
Tspan6-201ENSMUST00000087557 Muc16A0A140LJ72 8478 aa1.92□□□□□ -2.1
Tspan6-201ENSMUST00000087557 Krtap21-1Q925H4 128 aa1.7□□□□□ -2.14
Tspan6-201ENSMUST00000087557 Phgr1Q8K0G7 91 aa1.65□□□□□ -2.14
Tspan6-201ENSMUST00000087557 Krtap6-2O08884 159 aa1.62□□□□□ -2.15
Retrieved 80 of 22,080 RNA–protein pairs in 88.2 ms