RNA–Protein interactions for RNA: ENSMUST00000085096.9

Ccdc88c-202, Transcript of Protein Daple, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ccdc88c, Length 6,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-202ENSMUST00000085096 Krtap4-13Q9D7P3 165 aa5.03□□□□□ -1.6
Ccdc88c-202ENSMUST00000085096 Fat4Q2PZL6 4981 aa5.02□□□□□ -1.61
Ccdc88c-202ENSMUST00000085096 Ubr4A2AN08 5180 aa5.02□□□□□ -1.61
Ccdc88c-202ENSMUST00000085096 Ush2AQ2QI47 5193 aa4.98□□□□□ -1.61
Ccdc88c-202ENSMUST00000085096 Krtap4-7Q9D732 168 aa4.97□□□□□ -1.61
Ccdc88c-202ENSMUST00000085096 Sprr2eO70556 76 aa4.91□□□□□ -1.62
Ccdc88c-202ENSMUST00000085096 Syne2Q6ZWQ0 6874 aaKnown RBP4.9□□□□□ -1.63
Ccdc88c-202ENSMUST00000085096 Fsip2A2ARZ3 6995 aa4.89□□□□□ -1.63
Ccdc88c-202ENSMUST00000085096 Mdn1A2ANY6 5589 aaKnown RBP4.84□□□□□ -1.63
Ccdc88c-202ENSMUST00000085096 Hmcn2A2AJ76 5100 aa4.81□□□□□ -1.64
Ccdc88c-202ENSMUST00000085096 Gm10024A0A0A0MQA4 119 aa4.77□□□□□ -1.65
Ccdc88c-202ENSMUST00000085096 Krtap19-4Q925H7 84 aa4.77□□□□□ -1.65
Ccdc88c-202ENSMUST00000085096 Lce1kJ3QP15 125 aa4.71□□□□□ -1.65
Ccdc88c-202ENSMUST00000085096 Muc5bE9Q5I3 4800 aa4.69□□□□□ -1.66
Ccdc88c-202ENSMUST00000085096 Rnf213E9Q555 5152 aaKnown RBP4.64□□□□□ -1.67
Ccdc88c-202ENSMUST00000085096 Lce1a1Q9CQH5 143 aa4.62□□□□□ -1.67
Ccdc88c-202ENSMUST00000085096 Gm11562A0PK51 136 aa4.52□□□□□ -1.69
Ccdc88c-202ENSMUST00000085096 Gm11554B1AQB2 190 aa4.47□□□□□ -1.69
Ccdc88c-202ENSMUST00000085096 Krtap6-3A0A087WQL6 57 aa4.39□□□□□ -1.71
Ccdc88c-202ENSMUST00000085096 SspoQ8CG65 4998 aa4.36□□□□□ -1.71
Ccdc88c-202ENSMUST00000085096 Gm11938Q9D3H4 131 aa4.36□□□□□ -1.71
Ccdc88c-202ENSMUST00000085096 Sprr2hO70559 108 aa4.29□□□□□ -1.72
Ccdc88c-202ENSMUST00000085096 Krtap20-2E9Q0A8 60 aa4.25□□□□□ -1.73
Ccdc88c-202ENSMUST00000085096 Mt3P28184 68 aa4.21□□□□□ -1.74
Ccdc88c-202ENSMUST00000085096 Krtap31-1Q9D644 177 aa4.14□□□□□ -1.75
Ccdc88c-202ENSMUST00000085096 Krtap4-16Q91W93 202 aa4.04□□□□□ -1.76
Ccdc88c-202ENSMUST00000085096 Gm11555B1AQ89 175 aa4□□□□□ -1.77
Ccdc88c-202ENSMUST00000085096 Sprr2dO70555 85 aa3.99□□□□□ -1.77
Ccdc88c-202ENSMUST00000085096 Mt1P02802 61 aaKnown RBP3.99□□□□□ -1.77
Ccdc88c-202ENSMUST00000085096 Sprr2bO70554 98 aa3.86□□□□□ -1.79
Ccdc88c-202ENSMUST00000085096 Syne1Q6ZWR6 8799 aa3.77□□□□□ -1.81
Ccdc88c-202ENSMUST00000085096 Krtap31-2Q8CAY5 177 aa3.51□□□□□ -1.85
Ccdc88c-202ENSMUST00000085096 Macf1Q9QXZ0 7354 aaKnown RBP3.44□□□□□ -1.86
Ccdc88c-202ENSMUST00000085096 Gm11568A2A4M2 211 aa3.42□□□□□ -1.86
Ccdc88c-202ENSMUST00000085096 Krtap9-1Q64526 186 aa3.42□□□□□ -1.86
Ccdc88c-202ENSMUST00000085096 Gm11559Q9D3H7 191 aa3.41□□□□□ -1.86
Ccdc88c-202ENSMUST00000085096 NebE9Q1W3 7152 aa3.4□□□□□ -1.86
Ccdc88c-202ENSMUST00000085096 DstQ91ZU6 7393 aaKnown RBP3.4□□□□□ -1.87
Ccdc88c-202ENSMUST00000085096 Muc16A0A140LJ72 8478 aa3.26□□□□□ -1.89
Ccdc88c-202ENSMUST00000085096 Muc19Q6PZE0 7524 aa3.22□□□□□ -1.89
Ccdc88c-202ENSMUST00000085096 Eppk1Q8R0W0 6548 aa3.13□□□□□ -1.91
Ccdc88c-202ENSMUST00000085096 1110025L11RikO09048 78 aa3.11□□□□□ -1.91
Ccdc88c-202ENSMUST00000085096 Krtap6-5Q925H3 78 aa3.11□□□□□ -1.91
Ccdc88c-202ENSMUST00000085096 ObscnA2AAJ9 8891 aaKnown RBP3.06□□□□□ -1.92
Ccdc88c-202ENSMUST00000085096 Gm10229O08631 77 aa2.98□□□□□ -1.93
Ccdc88c-202ENSMUST00000085096 Kmt2dQ6PDK2 5588 aa2.96□□□□□ -1.94
Ccdc88c-202ENSMUST00000085096 Krtap5-2Q9D5Z7 189 aa2.88□□□□□ -1.95
Ccdc88c-202ENSMUST00000085096 Gm2431E9Q8S1 172 aa2.74□□□□□ -1.97
Ccdc88c-202ENSMUST00000085096 Phgr1Q8K0G7 91 aa2.72□□□□□ -1.97
Ccdc88c-202ENSMUST00000085096 Hmcn1D3YXG0 5634 aa2.7□□□□□ -1.98
Ccdc88c-202ENSMUST00000085096 Gm4553A0A1B0GSA9 284 aa2.7□□□□□ -1.98
Ccdc88c-202ENSMUST00000085096 Gm11639A0A1D5RLM8 5808 aa2.54□□□□□ -2
Ccdc88c-202ENSMUST00000085096 Gm10153A0A1B0GRL1 320 aa2.49□□□□□ -2.01
Ccdc88c-202ENSMUST00000085096 A030005L19RikA0A1Y7VIU2 113 aa2.43□□□□□ -2.02
Ccdc88c-202ENSMUST00000085096 Krtap6-2O08884 159 aa2.41□□□□□ -2.02
Ccdc88c-202ENSMUST00000085096 Gpr98Q8VHN7 6298 aaKnown RBP2.36□□□□□ -2.03
Ccdc88c-202ENSMUST00000085096 Gm45337A0A1B0GS71 263 aa2.32□□□□□ -2.04
Ccdc88c-202ENSMUST00000085096 A0A1Y7VJH8 109 aa2.25□□□□□ -2.05
Ccdc88c-202ENSMUST00000085096 Krtap21-1Q925H4 128 aa2.23□□□□□ -2.05
Ccdc88c-202ENSMUST00000085096 AhnakE9Q616 5656 aaKnown RBP2.22□□□□□ -2.05
Ccdc88c-202ENSMUST00000085096 Gm40460A0A1B0GR10 244 aa2.21□□□□□ -2.06
Ccdc88c-202ENSMUST00000085096 Gm7579A0A1B0GRJ4 243 aa2.21□□□□□ -2.06
Ccdc88c-202ENSMUST00000085096 Krtap5-5Q2TA51 241 aa2.21□□□□□ -2.06
Ccdc88c-202ENSMUST00000085096 Krtap5-4Q62220 223 aa2.21□□□□□ -2.06
Ccdc88c-202ENSMUST00000085096 Gm39115A0A1B0GSH7 232 aa2.15□□□□□ -2.07
Ccdc88c-202ENSMUST00000085096 Gm11567Q9D141 195 aa2.1□□□□□ -2.07
Ccdc88c-202ENSMUST00000085096 A0A1Y7VLE6 161 aa1.8□□□□□ -2.12
Ccdc88c-202ENSMUST00000085096 Gm45618A0A1B0GSA0 219 aa1.76□□□□□ -2.13
Ccdc88c-202ENSMUST00000085096 Krtap5-1Q64507 230 aa1.64□□□□□ -2.15
Ccdc88c-202ENSMUST00000085096 Gm29735A0A1B0GT06 219 aa1.61□□□□□ -2.15
Ccdc88c-202ENSMUST00000085096 A0A1Y7VJ07 166 aa1.31□□□□□ -2.2
Ccdc88c-202ENSMUST00000085096 A0A286YCP9 139 aa1.16□□□□□ -2.22
Ccdc88c-202ENSMUST00000085096 Krtap28-10A0A1Y7VP58 119 aa0.96□□□□□ -2.26
Ccdc88c-202ENSMUST00000085096 A030003K21RikA0A1Y7VIM3 128 aa0.96□□□□□ -2.26
Ccdc88c-202ENSMUST00000085096 Gm4559A4IF42 199 aa0.94□□□□□ -2.26
Ccdc88c-202ENSMUST00000085096 A030005K14RikA0A1Y7VNY1 122 aa0.94□□□□□ -2.26
Ccdc88c-202ENSMUST00000085096 A030014E15RikA0A1Y7VJV2 120 aa0.92□□□□□ -2.26
Ccdc88c-202ENSMUST00000085096 Gm7544A0A1Y7VJ58 118 aa0.9□□□□□ -2.27
Ccdc88c-202ENSMUST00000085096 Krtap28-13A0A087WQP5 138 aa0.88□□□□□ -2.27
Ccdc88c-202ENSMUST00000085096 Gm6217A0A1Y7VJK9 128 aa0.75□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 83 ms