RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Gm11562A0PK51 136 aa4.34□□□□□ -1.71
Pcdha1-201ENSMUST00000070797 Gm11596B1AQB0 205 aa4.33□□□□□ -1.72
Pcdha1-201ENSMUST00000070797 Krtap4-1Q3UUY3 169 aa4.33□□□□□ -1.72
Pcdha1-201ENSMUST00000070797 ZanO88799 5376 aa4.27□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Gm11564A2A4L9 201 aa4.26□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Gm11563B1AQ90 168 aa4.26□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Gm11595B1AQA7 289 aa4.26□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Krtap4-8B1AQA8 209 aa4.26□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Syne1Q6ZWR6 8799 aa4.25□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Fat4Q2PZL6 4981 aa4.23□□□□□ -1.73
Pcdha1-201ENSMUST00000070797 Krtap4-9B1AQA9 244 aa4.21□□□□□ -1.74
Pcdha1-201ENSMUST00000070797 Krtap17-1A2A5X6 109 aa4.2□□□□□ -1.74
Pcdha1-201ENSMUST00000070797 Ubr4A2AN08 5180 aa4.2□□□□□ -1.74
Pcdha1-201ENSMUST00000070797 2300003K06RikA2A4M0 262 aa4.19□□□□□ -1.74
Pcdha1-201ENSMUST00000070797 Muc5bE9Q5I3 4800 aa4.18□□□□□ -1.74
Pcdha1-201ENSMUST00000070797 Krtap4-7Q9D732 168 aa4.16□□□□□ -1.74
Pcdha1-201ENSMUST00000070797 A030003K21RikA0A1Y7VIM3 128 aa4.11□□□□□ -1.75
Pcdha1-201ENSMUST00000070797 Rnf213E9Q555 5152 aaKnown RBP4.09□□□□□ -1.75
Pcdha1-201ENSMUST00000070797 Krtap4-13Q9D7P3 165 aa4.09□□□□□ -1.75
Pcdha1-201ENSMUST00000070797 Krtap4-16Q91W93 202 aa4.09□□□□□ -1.76
Pcdha1-201ENSMUST00000070797 Ush2AQ2QI47 5193 aa4.07□□□□□ -1.76
Pcdha1-201ENSMUST00000070797 Syne2Q6ZWQ0 6874 aaKnown RBP4□□□□□ -1.77
Pcdha1-201ENSMUST00000070797 Lce1kJ3QP15 125 aa3.98□□□□□ -1.77
Pcdha1-201ENSMUST00000070797 SspoQ8CG65 4998 aa3.91□□□□□ -1.78
Pcdha1-201ENSMUST00000070797 Krtap6-3A0A087WQL6 57 aa3.9□□□□□ -1.78
Pcdha1-201ENSMUST00000070797 Fsip2A2ARZ3 6995 aa3.89□□□□□ -1.79
Pcdha1-201ENSMUST00000070797 Mt3P28184 68 aa3.88□□□□□ -1.79
Pcdha1-201ENSMUST00000070797 Lce1a1Q9CQH5 143 aa3.88□□□□□ -1.79
Pcdha1-201ENSMUST00000070797 Krtap31-2Q8CAY5 177 aa3.84□□□□□ -1.79
Pcdha1-201ENSMUST00000070797 Mt1P02802 61 aaKnown RBP3.82□□□□□ -1.8
Pcdha1-201ENSMUST00000070797 Gm6217A0A1Y7VJK9 128 aa3.81□□□□□ -1.8
Pcdha1-201ENSMUST00000070797 Muc16A0A140LJ72 8478 aa3.72□□□□□ -1.81
Pcdha1-201ENSMUST00000070797 A0A1Y7VJH8 109 aa3.71□□□□□ -1.81
Pcdha1-201ENSMUST00000070797 Krtap28-10A0A1Y7VP58 119 aa3.67□□□□□ -1.82
Pcdha1-201ENSMUST00000070797 Gm11554B1AQB2 190 aa3.67□□□□□ -1.82
Pcdha1-201ENSMUST00000070797 Gm7544A0A1Y7VJ58 118 aa3.66□□□□□ -1.82
Pcdha1-201ENSMUST00000070797 Sprr2bO70554 98 aa3.63□□□□□ -1.83
Pcdha1-201ENSMUST00000070797 A030005K14RikA0A1Y7VNY1 122 aa3.61□□□□□ -1.83
Pcdha1-201ENSMUST00000070797 Eppk1Q8R0W0 6548 aa3.56□□□□□ -1.84
Pcdha1-201ENSMUST00000070797 Krtap20-2E9Q0A8 60 aa3.53□□□□□ -1.84
Pcdha1-201ENSMUST00000070797 A030005L19RikA0A1Y7VIU2 113 aa3.5□□□□□ -1.85
Pcdha1-201ENSMUST00000070797 Krtap28-13A0A087WQP5 138 aa3.43□□□□□ -1.86
Pcdha1-201ENSMUST00000070797 ObscnA2AAJ9 8891 aaKnown RBP3.42□□□□□ -1.86
Pcdha1-201ENSMUST00000070797 Macf1Q9QXZ0 7354 aaKnown RBP3.39□□□□□ -1.87
Pcdha1-201ENSMUST00000070797 Gm11555B1AQ89 175 aa3.34□□□□□ -1.87
Pcdha1-201ENSMUST00000070797 A0A1Y7VJ07 166 aa3.3□□□□□ -1.88
Pcdha1-201ENSMUST00000070797 DstQ91ZU6 7393 aaKnown RBP3.24□□□□□ -1.89
Pcdha1-201ENSMUST00000070797 Kmt2dQ6PDK2 5588 aa3.18□□□□□ -1.9
Pcdha1-201ENSMUST00000070797 NebE9Q1W3 7152 aa3.13□□□□□ -1.91
Pcdha1-201ENSMUST00000070797 1110025L11RikO09048 78 aa3.06□□□□□ -1.92
Pcdha1-201ENSMUST00000070797 Krtap6-5Q925H3 78 aa3.06□□□□□ -1.92
Pcdha1-201ENSMUST00000070797 Gpr98Q8VHN7 6298 aaKnown RBP2.93□□□□□ -1.94
Pcdha1-201ENSMUST00000070797 Gm11559Q9D3H7 191 aa2.92□□□□□ -1.94
Pcdha1-201ENSMUST00000070797 Muc19Q6PZE0 7524 aa2.88□□□□□ -1.95
Pcdha1-201ENSMUST00000070797 A030014E15RikA0A1Y7VJV2 120 aa2.88□□□□□ -1.95
Pcdha1-201ENSMUST00000070797 Gm11568A2A4M2 211 aa2.85□□□□□ -1.95
Pcdha1-201ENSMUST00000070797 Gm10229O08631 77 aa2.85□□□□□ -1.95
Pcdha1-201ENSMUST00000070797 Krtap9-1Q64526 186 aa2.85□□□□□ -1.95
Pcdha1-201ENSMUST00000070797 A0A286YCP9 139 aa2.82□□□□□ -1.96
Pcdha1-201ENSMUST00000070797 Phgr1Q8K0G7 91 aa2.82□□□□□ -1.96
Pcdha1-201ENSMUST00000070797 Gm11639A0A1D5RLM8 5808 aa2.8□□□□□ -1.96
Pcdha1-201ENSMUST00000070797 Krtap5-2Q9D5Z7 189 aa2.64□□□□□ -1.99
Pcdha1-201ENSMUST00000070797 Hmcn1D3YXG0 5634 aa2.53□□□□□ -2
Pcdha1-201ENSMUST00000070797 Gm4553A0A1B0GSA9 284 aa2.43□□□□□ -2.02
Pcdha1-201ENSMUST00000070797 Gm10153A0A1B0GRL1 320 aa2.42□□□□□ -2.02
Pcdha1-201ENSMUST00000070797 Gm2431E9Q8S1 172 aa2.28□□□□□ -2.04
Pcdha1-201ENSMUST00000070797 Gm11567Q9D141 195 aa2.28□□□□□ -2.04
Pcdha1-201ENSMUST00000070797 AhnakE9Q616 5656 aaKnown RBP2.28□□□□□ -2.04
Pcdha1-201ENSMUST00000070797 Gm45337A0A1B0GS71 263 aa2.26□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Gm40460A0A1B0GR10 244 aa2.24□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Gm7579A0A1B0GRJ4 243 aa2.24□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Krtap6-2O08884 159 aa2.24□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Krtap5-5Q2TA51 241 aa2.24□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Krtap5-4Q62220 223 aa2.24□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Krtap21-1Q925H4 128 aa2.22□□□□□ -2.05
Pcdha1-201ENSMUST00000070797 Gm39115A0A1B0GSH7 232 aa2.01□□□□□ -2.09
Pcdha1-201ENSMUST00000070797 Gm45618A0A1B0GSA0 219 aa1.9□□□□□ -2.11
Pcdha1-201ENSMUST00000070797 Gm29735A0A1B0GT06 219 aa1.72□□□□□ -2.13
Pcdha1-201ENSMUST00000070797 Krtap5-1Q64507 230 aa1.38□□□□□ -2.19
Pcdha1-201ENSMUST00000070797 Gm4559A4IF42 199 aa1.31□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 102.8 ms