RNA–Protein interactions for RNA: ENSMUST00000069168.12

Cpsf6-201, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-201ENSMUST00000069168 Gm11595B1AQA7 289 aa2.42□□□□□ -2.02
Cpsf6-201ENSMUST00000069168 Krtap4-8B1AQA8 209 aa2.42□□□□□ -2.02
Cpsf6-201ENSMUST00000069168 Mt2P02798 61 aa2.42□□□□□ -2.02
Cpsf6-201ENSMUST00000069168 Lce1dQ9D731 133 aa2.41□□□□□ -2.02
Cpsf6-201ENSMUST00000069168 Lce3bQ9CQM7 98 aa2.41□□□□□ -2.02
Cpsf6-201ENSMUST00000069168 Gm10272F7CZ33 110 aa2.39□□□□□ -2.03
Cpsf6-201ENSMUST00000069168 Mt4P47945 62 aa2.39□□□□□ -2.03
Cpsf6-201ENSMUST00000069168 Lce3cQ91V05 98 aa2.38□□□□□ -2.03
Cpsf6-201ENSMUST00000069168 Krtap22-2J3QNX6 67 aa2.36□□□□□ -2.03
Cpsf6-201ENSMUST00000069168 Gm10100J3QK64 120 aa2.36□□□□□ -2.03
Cpsf6-201ENSMUST00000069168 Krtap4-9B1AQA9 244 aa2.35□□□□□ -2.03
Cpsf6-201ENSMUST00000069168 Gm10142J3KMP7 120 aa2.34□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Sprr2eO70556 76 aa2.33□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Lce1eQ9D139 143 aa2.33□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Gm38119A0A0A6YX29 146 aa2.33□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Krtap19-4Q925H7 84 aa2.32□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Krtap31-1Q9D644 177 aa2.32□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Sprr2dO70555 85 aa2.3□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Krtap4-13Q9D7P3 165 aa2.3□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Sprr2iO70560 76 aa2.3□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Lce3dE9Q8V1 98 aa2.29□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Lce3eF8VQJ0 98 aa2.29□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Lce3fQ6PAI4 98 aa2.29□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Fsip2A2ARZ3 6995 aa2.29□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Gm11938Q9D3H4 131 aa2.29□□□□□ -2.04
Cpsf6-201ENSMUST00000069168 Mdn1A2ANY6 5589 aaKnown RBP2.27□□□□□ -2.05
Cpsf6-201ENSMUST00000069168 Lce3aQ497I5 98 aa2.25□□□□□ -2.05
Cpsf6-201ENSMUST00000069168 2300003K06RikA2A4M0 262 aa2.23□□□□□ -2.05
Cpsf6-201ENSMUST00000069168 Sprr2hO70559 108 aa2.22□□□□□ -2.05
Cpsf6-201ENSMUST00000069168 Lce1lQ9D1G7 135 aa2.19□□□□□ -2.06
Cpsf6-201ENSMUST00000069168 Gm10024A0A0A0MQA4 119 aa2.19□□□□□ -2.06
Cpsf6-201ENSMUST00000069168 Lce1cQ9D1C5 147 aa2.19□□□□□ -2.06
Cpsf6-201ENSMUST00000069168 Lce1fB9EJP6 147 aa2.13□□□□□ -2.07
Cpsf6-201ENSMUST00000069168 Syne1Q6ZWR6 8799 aa2.12□□□□□ -2.07
Cpsf6-201ENSMUST00000069168 Lce1bQ9D149 137 aa2.12□□□□□ -2.07
Cpsf6-201ENSMUST00000069168 Krtap6-3A0A087WQL6 57 aa2.11□□□□□ -2.07
Cpsf6-201ENSMUST00000069168 Lce1a1Q9CQH5 143 aa2.11□□□□□ -2.07
Cpsf6-201ENSMUST00000069168 Sprr2bO70554 98 aa2.06□□□□□ -2.08
Cpsf6-201ENSMUST00000069168 ObscnA2AAJ9 8891 aaKnown RBP1.99□□□□□ -2.09
Cpsf6-201ENSMUST00000069168 Krtap20-2E9Q0A8 60 aa1.99□□□□□ -2.09
Cpsf6-201ENSMUST00000069168 Lce1kJ3QP15 125 aa1.98□□□□□ -2.09
Cpsf6-201ENSMUST00000069168 Mt3P28184 68 aa1.93□□□□□ -2.1
Cpsf6-201ENSMUST00000069168 Gm11554B1AQB2 190 aa1.91□□□□□ -2.1
Cpsf6-201ENSMUST00000069168 Gm11568A2A4M2 211 aa1.85□□□□□ -2.11
Cpsf6-201ENSMUST00000069168 Krtap9-1Q64526 186 aa1.85□□□□□ -2.11
Cpsf6-201ENSMUST00000069168 Mt1P02802 61 aaKnown RBP1.85□□□□□ -2.11
Cpsf6-201ENSMUST00000069168 Krtap4-16Q91W93 202 aa1.82□□□□□ -2.12
Cpsf6-201ENSMUST00000069168 Gm11559Q9D3H7 191 aa1.81□□□□□ -2.12
Cpsf6-201ENSMUST00000069168 Eppk1Q8R0W0 6548 aa1.79□□□□□ -2.12
Cpsf6-201ENSMUST00000069168 Krtap5-2Q9D5Z7 189 aa1.78□□□□□ -2.12
Cpsf6-201ENSMUST00000069168 Gm45618A0A1B0GSA0 219 aa1.77□□□□□ -2.13
Cpsf6-201ENSMUST00000069168 Gpr98Q8VHN7 6298 aaKnown RBP1.76□□□□□ -2.13
Cpsf6-201ENSMUST00000069168 Gm10153A0A1B0GRL1 320 aa1.71□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 Gm2431E9Q8S1 172 aa1.69□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 DstQ91ZU6 7393 aaKnown RBP1.69□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 Muc16A0A140LJ72 8478 aa1.68□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 Gm4553A0A1B0GSA9 284 aa1.68□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 Macf1Q9QXZ0 7354 aaKnown RBP1.68□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 Gm45337A0A1B0GS71 263 aa1.67□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 NebE9Q1W3 7152 aa1.66□□□□□ -2.14
Cpsf6-201ENSMUST00000069168 Muc19Q6PZE0 7524 aa1.62□□□□□ -2.15
Cpsf6-201ENSMUST00000069168 Kmt2dQ6PDK2 5588 aa1.61□□□□□ -2.15
Cpsf6-201ENSMUST00000069168 Gm39115A0A1B0GSH7 232 aa1.6□□□□□ -2.15
Cpsf6-201ENSMUST00000069168 Hmcn1D3YXG0 5634 aa1.59□□□□□ -2.15
Cpsf6-201ENSMUST00000069168 Gm29735A0A1B0GT06 219 aa1.55□□□□□ -2.16
Cpsf6-201ENSMUST00000069168 Gm40460A0A1B0GR10 244 aa1.53□□□□□ -2.16
Cpsf6-201ENSMUST00000069168 Gm7579A0A1B0GRJ4 243 aa1.53□□□□□ -2.16
Cpsf6-201ENSMUST00000069168 Krtap5-5Q2TA51 241 aa1.53□□□□□ -2.16
Cpsf6-201ENSMUST00000069168 Krtap5-4Q62220 223 aa1.53□□□□□ -2.16
Cpsf6-201ENSMUST00000069168 1110025L11RikO09048 78 aa1.48□□□□□ -2.17
Cpsf6-201ENSMUST00000069168 Krtap6-5Q925H3 78 aa1.48□□□□□ -2.17
Cpsf6-201ENSMUST00000069168 Gm11639A0A1D5RLM8 5808 aa1.41□□□□□ -2.18
Cpsf6-201ENSMUST00000069168 Gm10229O08631 77 aa1.35□□□□□ -2.19
Cpsf6-201ENSMUST00000069168 Gm11567Q9D141 195 aa1.31□□□□□ -2.2
Cpsf6-201ENSMUST00000069168 AhnakE9Q616 5656 aaKnown RBP1.3□□□□□ -2.2
Cpsf6-201ENSMUST00000069168 Krtap5-1Q64507 230 aa1.26□□□□□ -2.21
Cpsf6-201ENSMUST00000069168 Phgr1Q8K0G7 91 aa1.25□□□□□ -2.21
Cpsf6-201ENSMUST00000069168 Krtap21-1Q925H4 128 aa1.18□□□□□ -2.22
Cpsf6-201ENSMUST00000069168 Krtap6-2O08884 159 aa1.08□□□□□ -2.24
Cpsf6-201ENSMUST00000069168 Gm4559A4IF42 199 aa1.04□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 76.9 ms