RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Krtap4-1Q3UUY3 169 aa4.43□□□□□ -1.7
Syne3-201ENSMUST00000067005 Syne1Q6ZWR6 8799 aa4.42□□□□□ -1.7
Syne3-201ENSMUST00000067005 Sprr2hO70559 108 aa4.41□□□□□ -1.7
Syne3-201ENSMUST00000067005 Gm11562A0PK51 136 aa4.39□□□□□ -1.71
Syne3-201ENSMUST00000067005 Gm11938Q9D3H4 131 aa4.39□□□□□ -1.71
Syne3-201ENSMUST00000067005 Rnf213E9Q555 5152 aaKnown RBP4.38□□□□□ -1.71
Syne3-201ENSMUST00000067005 Gm11596B1AQB0 205 aa4.38□□□□□ -1.71
Syne3-201ENSMUST00000067005 Ush2AQ2QI47 5193 aa4.35□□□□□ -1.71
Syne3-201ENSMUST00000067005 Gm11564A2A4L9 201 aa4.35□□□□□ -1.71
Syne3-201ENSMUST00000067005 Gm11563B1AQ90 168 aa4.35□□□□□ -1.71
Syne3-201ENSMUST00000067005 Gm11595B1AQA7 289 aa4.35□□□□□ -1.71
Syne3-201ENSMUST00000067005 Krtap4-8B1AQA8 209 aa4.35□□□□□ -1.71
Syne3-201ENSMUST00000067005 Krtap17-1A2A5X6 109 aa4.34□□□□□ -1.72
Syne3-201ENSMUST00000067005 Krtap4-9B1AQA9 244 aa4.31□□□□□ -1.72
Syne3-201ENSMUST00000067005 2300003K06RikA2A4M0 262 aa4.3□□□□□ -1.72
Syne3-201ENSMUST00000067005 Krtap4-7Q9D732 168 aa4.25□□□□□ -1.73
Syne3-201ENSMUST00000067005 Krtap31-1Q9D644 177 aa4.23□□□□□ -1.73
Syne3-201ENSMUST00000067005 Lce1kJ3QP15 125 aa4.19□□□□□ -1.74
Syne3-201ENSMUST00000067005 Krtap4-13Q9D7P3 165 aa4.17□□□□□ -1.74
Syne3-201ENSMUST00000067005 SspoQ8CG65 4998 aa4.15□□□□□ -1.74
Syne3-201ENSMUST00000067005 Mt3P28184 68 aa4.13□□□□□ -1.75
Syne3-201ENSMUST00000067005 Fsip2A2ARZ3 6995 aa3.98□□□□□ -1.77
Syne3-201ENSMUST00000067005 Krtap6-3A0A087WQL6 57 aa3.96□□□□□ -1.77
Syne3-201ENSMUST00000067005 Syne2Q6ZWQ0 6874 aaKnown RBP3.96□□□□□ -1.77
Syne3-201ENSMUST00000067005 Mt1P02802 61 aaKnown RBP3.95□□□□□ -1.78
Syne3-201ENSMUST00000067005 Lce1a1Q9CQH5 143 aa3.87□□□□□ -1.79
Syne3-201ENSMUST00000067005 Krtap4-16Q91W93 202 aa3.77□□□□□ -1.81
Syne3-201ENSMUST00000067005 ObscnA2AAJ9 8891 aaKnown RBP3.77□□□□□ -1.81
Syne3-201ENSMUST00000067005 Krtap20-2E9Q0A8 60 aa3.7□□□□□ -1.82
Syne3-201ENSMUST00000067005 Gm11554B1AQB2 190 aa3.68□□□□□ -1.82
Syne3-201ENSMUST00000067005 Muc16A0A140LJ72 8478 aa3.67□□□□□ -1.82
Syne3-201ENSMUST00000067005 Sprr2bO70554 98 aa3.58□□□□□ -1.84
Syne3-201ENSMUST00000067005 Gm11555B1AQ89 175 aa3.57□□□□□ -1.84
Syne3-201ENSMUST00000067005 Eppk1Q8R0W0 6548 aa3.51□□□□□ -1.85
Syne3-201ENSMUST00000067005 Kmt2dQ6PDK2 5588 aa3.38□□□□□ -1.87
Syne3-201ENSMUST00000067005 Macf1Q9QXZ0 7354 aaKnown RBP3.32□□□□□ -1.88
Syne3-201ENSMUST00000067005 DstQ91ZU6 7393 aaKnown RBP3.27□□□□□ -1.89
Syne3-201ENSMUST00000067005 1110025L11RikO09048 78 aa3.19□□□□□ -1.9
Syne3-201ENSMUST00000067005 Krtap6-5Q925H3 78 aa3.19□□□□□ -1.9
Syne3-201ENSMUST00000067005 NebE9Q1W3 7152 aa3.11□□□□□ -1.91
Syne3-201ENSMUST00000067005 Krtap31-2Q8CAY5 177 aa3.11□□□□□ -1.91
Syne3-201ENSMUST00000067005 Gm11559Q9D3H7 191 aa3.07□□□□□ -1.92
Syne3-201ENSMUST00000067005 Gm11568A2A4M2 211 aa3.06□□□□□ -1.92
Syne3-201ENSMUST00000067005 Krtap9-1Q64526 186 aa3.06□□□□□ -1.92
Syne3-201ENSMUST00000067005 Gm10229O08631 77 aa2.98□□□□□ -1.93
Syne3-201ENSMUST00000067005 Gm11639A0A1D5RLM8 5808 aa2.93□□□□□ -1.94
Syne3-201ENSMUST00000067005 Muc19Q6PZE0 7524 aa2.89□□□□□ -1.95
Syne3-201ENSMUST00000067005 Krtap5-2Q9D5Z7 189 aa2.88□□□□□ -1.95
Syne3-201ENSMUST00000067005 Gpr98Q8VHN7 6298 aaKnown RBP2.81□□□□□ -1.96
Syne3-201ENSMUST00000067005 Gm4553A0A1B0GSA9 284 aa2.71□□□□□ -1.98
Syne3-201ENSMUST00000067005 Phgr1Q8K0G7 91 aa2.69□□□□□ -1.98
Syne3-201ENSMUST00000067005 Hmcn1D3YXG0 5634 aa2.69□□□□□ -1.98
Syne3-201ENSMUST00000067005 A0A1Y7VLE6 161 aa2.54□□□□□ -2
Syne3-201ENSMUST00000067005 Gm2431E9Q8S1 172 aa2.49□□□□□ -2.01
Syne3-201ENSMUST00000067005 Gm10153A0A1B0GRL1 320 aa2.48□□□□□ -2.01
Syne3-201ENSMUST00000067005 A030005L19RikA0A1Y7VIU2 113 aa2.47□□□□□ -2.01
Syne3-201ENSMUST00000067005 AhnakE9Q616 5656 aaKnown RBP2.43□□□□□ -2.02
Syne3-201ENSMUST00000067005 Krtap6-2O08884 159 aa2.42□□□□□ -2.02
Syne3-201ENSMUST00000067005 Gm45337A0A1B0GS71 263 aa2.41□□□□□ -2.02
Syne3-201ENSMUST00000067005 Gm40460A0A1B0GR10 244 aa2.39□□□□□ -2.03
Syne3-201ENSMUST00000067005 Gm7579A0A1B0GRJ4 243 aa2.39□□□□□ -2.03
Syne3-201ENSMUST00000067005 Krtap5-5Q2TA51 241 aa2.39□□□□□ -2.03
Syne3-201ENSMUST00000067005 Krtap5-4Q62220 223 aa2.39□□□□□ -2.03
Syne3-201ENSMUST00000067005 Krtap21-1Q925H4 128 aa2.3□□□□□ -2.04
Syne3-201ENSMUST00000067005 A030003K21RikA0A1Y7VIM3 128 aa2.3□□□□□ -2.04
Syne3-201ENSMUST00000067005 A0A1Y7VJH8 109 aa2.22□□□□□ -2.05
Syne3-201ENSMUST00000067005 Gm39115A0A1B0GSH7 232 aa2.2□□□□□ -2.06
Syne3-201ENSMUST00000067005 Gm6217A0A1Y7VJK9 128 aa2.15□□□□□ -2.07
Syne3-201ENSMUST00000067005 Krtap28-10A0A1Y7VP58 119 aa2.14□□□□□ -2.07
Syne3-201ENSMUST00000067005 Gm7544A0A1Y7VJ58 118 aa2.11□□□□□ -2.07
Syne3-201ENSMUST00000067005 A030005K14RikA0A1Y7VNY1 122 aa2.03□□□□□ -2.08
Syne3-201ENSMUST00000067005 Krtap28-13A0A087WQP5 138 aa2.01□□□□□ -2.09
Syne3-201ENSMUST00000067005 Gm11567Q9D141 195 aa1.95□□□□□ -2.1
Syne3-201ENSMUST00000067005 A0A1Y7VJ07 166 aa1.91□□□□□ -2.1
Syne3-201ENSMUST00000067005 Gm45618A0A1B0GSA0 219 aa1.88□□□□□ -2.11
Syne3-201ENSMUST00000067005 Gm29735A0A1B0GT06 219 aa1.82□□□□□ -2.12
Syne3-201ENSMUST00000067005 A030014E15RikA0A1Y7VJV2 120 aa1.69□□□□□ -2.14
Syne3-201ENSMUST00000067005 A0A286YCP9 139 aa1.49□□□□□ -2.17
Syne3-201ENSMUST00000067005 Krtap5-1Q64507 230 aa1.3□□□□□ -2.2
Syne3-201ENSMUST00000067005 Gm4559A4IF42 199 aa0.91□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 377 ms