RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Lce1bQ9D149 137 aa5.63□□□□□ -1.51
Trim50-201ENSMUST00000065785 Krtap4-13Q9D7P3 165 aa5.57□□□□□ -1.52
Trim50-201ENSMUST00000065785 Gm10272F7CZ33 110 aa5.47□□□□□ -1.53
Trim50-201ENSMUST00000065785 Gm38119A0A0A6YX29 146 aa5.46□□□□□ -1.54
Trim50-201ENSMUST00000065785 Gm9112A2AI92 75 aa5.46□□□□□ -1.54
Trim50-201ENSMUST00000065785 Sprr2gO70558 76 aa5.44□□□□□ -1.54
Trim50-201ENSMUST00000065785 Krtap6-3A0A087WQL6 57 aa5.44□□□□□ -1.54
Trim50-201ENSMUST00000065785 2300003K06RikA2A4M0 262 aa5.42□□□□□ -1.54
Trim50-201ENSMUST00000065785 Sprr2kO70562 68 aa5.42□□□□□ -1.54
Trim50-201ENSMUST00000065785 Sprr2dO70555 85 aa5.39□□□□□ -1.55
Trim50-201ENSMUST00000065785 Lce1dQ9D731 133 aa5.38□□□□□ -1.55
Trim50-201ENSMUST00000065785 Gm11938Q9D3H4 131 aa5.37□□□□□ -1.55
Trim50-201ENSMUST00000065785 Krtap4-7Q9D732 168 aa5.32□□□□□ -1.56
Trim50-201ENSMUST00000065785 Lce1lQ9D1G7 135 aa5.28□□□□□ -1.56
Trim50-201ENSMUST00000065785 4933428G20RikQ9D3X4 101 aa5.27□□□□□ -1.57
Trim50-201ENSMUST00000065785 Lce1eQ9D139 143 aa5.25□□□□□ -1.57
Trim50-201ENSMUST00000065785 Krtap19-4Q925H7 84 aa5.13□□□□□ -1.59
Trim50-201ENSMUST00000065785 Syne1Q6ZWR6 8799 aa5.06□□□□□ -1.6
Trim50-201ENSMUST00000065785 Lce3bQ9CQM7 98 aa5.06□□□□□ -1.6
Trim50-201ENSMUST00000065785 Lce1cQ9D1C5 147 aa5.05□□□□□ -1.6
Trim50-201ENSMUST00000065785 Lce1a1Q9CQH5 143 aa5□□□□□ -1.61
Trim50-201ENSMUST00000065785 Krtap20-2E9Q0A8 60 aa4.97□□□□□ -1.61
Trim50-201ENSMUST00000065785 Krtap5-2Q9D5Z7 189 aa4.94□□□□□ -1.62
Trim50-201ENSMUST00000065785 Lce1kJ3QP15 125 aa4.91□□□□□ -1.62
Trim50-201ENSMUST00000065785 Sprr2iO70560 76 aa4.9□□□□□ -1.63
Trim50-201ENSMUST00000065785 Gm10100J3QK64 120 aa4.89□□□□□ -1.63
Trim50-201ENSMUST00000065785 Lce1fB9EJP6 147 aa4.84□□□□□ -1.63
Trim50-201ENSMUST00000065785 A030014E15RikA0A1Y7VJV2 120 aa4.83□□□□□ -1.64
Trim50-201ENSMUST00000065785 Lce3cQ91V05 98 aa4.81□□□□□ -1.64
Trim50-201ENSMUST00000065785 Gm11568A2A4M2 211 aa4.79□□□□□ -1.64
Trim50-201ENSMUST00000065785 Krtap9-1Q64526 186 aa4.79□□□□□ -1.64
Trim50-201ENSMUST00000065785 Gm10142J3KMP7 120 aa4.79□□□□□ -1.64
Trim50-201ENSMUST00000065785 Lce3eF8VQJ0 98 aa4.76□□□□□ -1.65
Trim50-201ENSMUST00000065785 Lce3fQ6PAI4 98 aa4.76□□□□□ -1.65
Trim50-201ENSMUST00000065785 Lce3dE9Q8V1 98 aa4.74□□□□□ -1.65
Trim50-201ENSMUST00000065785 Eppk1Q8R0W0 6548 aa4.72□□□□□ -1.65
Trim50-201ENSMUST00000065785 Gm11559Q9D3H7 191 aa4.7□□□□□ -1.66
Trim50-201ENSMUST00000065785 Sprr2hO70559 108 aa4.68□□□□□ -1.66
Trim50-201ENSMUST00000065785 Mt1P02802 61 aaKnown RBP4.67□□□□□ -1.66
Trim50-201ENSMUST00000065785 Gm4553A0A1B0GSA9 284 aa4.66□□□□□ -1.66
Trim50-201ENSMUST00000065785 ObscnA2AAJ9 8891 aaKnown RBP4.64□□□□□ -1.67
Trim50-201ENSMUST00000065785 Gpr98Q8VHN7 6298 aaKnown RBP4.57□□□□□ -1.68
Trim50-201ENSMUST00000065785 Lce3aQ497I5 98 aa4.56□□□□□ -1.68
Trim50-201ENSMUST00000065785 Macf1Q9QXZ0 7354 aaKnown RBP4.55□□□□□ -1.68
Trim50-201ENSMUST00000065785 Gm11639A0A1D5RLM8 5808 aa4.55□□□□□ -1.68
Trim50-201ENSMUST00000065785 Gm11554B1AQB2 190 aa4.54□□□□□ -1.68
Trim50-201ENSMUST00000065785 Gm45337A0A1B0GS71 263 aa4.53□□□□□ -1.68
Trim50-201ENSMUST00000065785 Gm10153A0A1B0GRL1 320 aa4.52□□□□□ -1.69
Trim50-201ENSMUST00000065785 Sprr2eO70556 76 aa4.51□□□□□ -1.69
Trim50-201ENSMUST00000065785 Gm2431E9Q8S1 172 aa4.5□□□□□ -1.69
Trim50-201ENSMUST00000065785 Kmt2dQ6PDK2 5588 aa4.44□□□□□ -1.7
Trim50-201ENSMUST00000065785 Gm40460A0A1B0GR10 244 aa4.37□□□□□ -1.71
Trim50-201ENSMUST00000065785 Gm7579A0A1B0GRJ4 243 aa4.37□□□□□ -1.71
Trim50-201ENSMUST00000065785 Krtap5-5Q2TA51 241 aa4.37□□□□□ -1.71
Trim50-201ENSMUST00000065785 Krtap5-4Q62220 223 aa4.37□□□□□ -1.71
Trim50-201ENSMUST00000065785 Hmcn1D3YXG0 5634 aa4.34□□□□□ -1.71
Trim50-201ENSMUST00000065785 Sprr2fO70557 76 aa4.27□□□□□ -1.73
Trim50-201ENSMUST00000065785 Gm39115A0A1B0GSH7 232 aa4.22□□□□□ -1.73
Trim50-201ENSMUST00000065785 Mt3P28184 68 aa4.18□□□□□ -1.74
Trim50-201ENSMUST00000065785 Krtap31-1Q9D644 177 aa4.18□□□□□ -1.74
Trim50-201ENSMUST00000065785 Muc19Q6PZE0 7524 aa4.12□□□□□ -1.75
Trim50-201ENSMUST00000065785 Gm45618A0A1B0GSA0 219 aa4.03□□□□□ -1.76
Trim50-201ENSMUST00000065785 DstQ91ZU6 7393 aaKnown RBP4.01□□□□□ -1.77
Trim50-201ENSMUST00000065785 Gm10024A0A0A0MQA4 119 aa3.98□□□□□ -1.77
Trim50-201ENSMUST00000065785 Krtap4-16Q91W93 202 aa3.84□□□□□ -1.79
Trim50-201ENSMUST00000065785 AhnakE9Q616 5656 aaKnown RBP3.76□□□□□ -1.81
Trim50-201ENSMUST00000065785 NebE9Q1W3 7152 aa3.75□□□□□ -1.81
Trim50-201ENSMUST00000065785 1110025L11RikO09048 78 aa3.56□□□□□ -1.84
Trim50-201ENSMUST00000065785 Krtap6-5Q925H3 78 aa3.56□□□□□ -1.84
Trim50-201ENSMUST00000065785 Muc16A0A140LJ72 8478 aa3.42□□□□□ -1.86
Trim50-201ENSMUST00000065785 Sprr2bO70554 98 aa3.26□□□□□ -1.89
Trim50-201ENSMUST00000065785 Gm29735A0A1B0GT06 219 aa3.25□□□□□ -1.89
Trim50-201ENSMUST00000065785 Gm10229O08631 77 aa3.15□□□□□ -1.91
Trim50-201ENSMUST00000065785 Krtap5-1Q64507 230 aa3.11□□□□□ -1.91
Trim50-201ENSMUST00000065785 Gm11567Q9D141 195 aa3.09□□□□□ -1.91
Trim50-201ENSMUST00000065785 Krtap31-2Q8CAY5 177 aa2.95□□□□□ -1.94
Trim50-201ENSMUST00000065785 Krtap21-1Q925H4 128 aa2.93□□□□□ -1.94
Trim50-201ENSMUST00000065785 Gm4559A4IF42 199 aa2.91□□□□□ -1.94
Trim50-201ENSMUST00000065785 Phgr1Q8K0G7 91 aa2.76□□□□□ -1.97
Trim50-201ENSMUST00000065785 Krtap6-2O08884 159 aa2.68□□□□□ -1.98
Retrieved 80 of 22,080 RNA–protein pairs in 87.6 ms