RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Mt4P47945 62 aa3.36□□□□□ -1.87
Rtn3-202ENSMUST00000065304 Ubr4A2AN08 5180 aa3.33□□□□□ -1.88
Rtn3-202ENSMUST00000065304 4932415D10RikA0A1W2P6U8 4986 aa3.32□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Mt3P28184 68 aa3.32□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Gm11564A2A4L9 201 aa3.29□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Gm11563B1AQ90 168 aa3.29□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Gm11595B1AQA7 289 aa3.29□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Krtap4-8B1AQA8 209 aa3.29□□□□□ -1.88
Rtn3-202ENSMUST00000065304 ObscnA2AAJ9 8891 aaKnown RBP3.29□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Krtap4-1Q3UUY3 169 aa3.28□□□□□ -1.88
Rtn3-202ENSMUST00000065304 Gm11938Q9D3H4 131 aa3.24□□□□□ -1.89
Rtn3-202ENSMUST00000065304 Fat4Q2PZL6 4981 aa3.21□□□□□ -1.9
Rtn3-202ENSMUST00000065304 Krtap4-9B1AQA9 244 aa3.2□□□□□ -1.9
Rtn3-202ENSMUST00000065304 ZanO88799 5376 aa3.2□□□□□ -1.9
Rtn3-202ENSMUST00000065304 Kiaa1109A2AAE1 5005 aa3.19□□□□□ -1.9
Rtn3-202ENSMUST00000065304 Krtap4-7Q9D732 168 aa3.18□□□□□ -1.9
Rtn3-202ENSMUST00000065304 Mdn1A2ANY6 5589 aaKnown RBP3.16□□□□□ -1.9
Rtn3-202ENSMUST00000065304 Muc5bE9Q5I3 4800 aa3.15□□□□□ -1.9
Rtn3-202ENSMUST00000065304 Lce1a2Q9D1K4 149 aa3.14□□□□□ -1.91
Rtn3-202ENSMUST00000065304 2300003K06RikA2A4M0 262 aa3.12□□□□□ -1.91
Rtn3-202ENSMUST00000065304 Lce1kJ3QP15 125 aa3.12□□□□□ -1.91
Rtn3-202ENSMUST00000065304 Lce1a1Q9CQH5 143 aa3.11□□□□□ -1.91
Rtn3-202ENSMUST00000065304 Syne2Q6ZWQ0 6874 aaKnown RBP3.1□□□□□ -1.91
Rtn3-202ENSMUST00000065304 Rnf213E9Q555 5152 aaKnown RBP3.09□□□□□ -1.92
Rtn3-202ENSMUST00000065304 Sprr2bO70554 98 aa3.07□□□□□ -1.92
Rtn3-202ENSMUST00000065304 Muc16A0A140LJ72 8478 aa3.07□□□□□ -1.92
Rtn3-202ENSMUST00000065304 Krtap4-16Q91W93 202 aa3.07□□□□□ -1.92
Rtn3-202ENSMUST00000065304 Krtap4-13Q9D7P3 165 aa3.05□□□□□ -1.92
Rtn3-202ENSMUST00000065304 Gpr98Q8VHN7 6298 aaKnown RBP3.03□□□□□ -1.92
Rtn3-202ENSMUST00000065304 Krtap20-2E9Q0A8 60 aa2.99□□□□□ -1.93
Rtn3-202ENSMUST00000065304 Ush2AQ2QI47 5193 aa2.98□□□□□ -1.93
Rtn3-202ENSMUST00000065304 Fsip2A2ARZ3 6995 aa2.96□□□□□ -1.94
Rtn3-202ENSMUST00000065304 A0A1Y7VLE6 161 aa2.93□□□□□ -1.94
Rtn3-202ENSMUST00000065304 Mt1P02802 61 aaKnown RBP2.93□□□□□ -1.94
Rtn3-202ENSMUST00000065304 SspoQ8CG65 4998 aa2.86□□□□□ -1.95
Rtn3-202ENSMUST00000065304 A030003K21RikA0A1Y7VIM3 128 aa2.77□□□□□ -1.97
Rtn3-202ENSMUST00000065304 Gm11554B1AQB2 190 aa2.76□□□□□ -1.97
Rtn3-202ENSMUST00000065304 Gm11555B1AQ89 175 aa2.73□□□□□ -1.97
Rtn3-202ENSMUST00000065304 Gm11639A0A1D5RLM8 5808 aa2.67□□□□□ -1.98
Rtn3-202ENSMUST00000065304 Gm6217A0A1Y7VJK9 128 aa2.63□□□□□ -1.99
Rtn3-202ENSMUST00000065304 Kmt2dQ6PDK2 5588 aa2.57□□□□□ -2
Rtn3-202ENSMUST00000065304 A0A1Y7VJ07 166 aa2.57□□□□□ -2
Rtn3-202ENSMUST00000065304 DstQ91ZU6 7393 aaKnown RBP2.55□□□□□ -2
Rtn3-202ENSMUST00000065304 A030005K14RikA0A1Y7VNY1 122 aa2.55□□□□□ -2
Rtn3-202ENSMUST00000065304 A0A1Y7VJH8 109 aa2.55□□□□□ -2
Rtn3-202ENSMUST00000065304 Macf1Q9QXZ0 7354 aaKnown RBP2.54□□□□□ -2
Rtn3-202ENSMUST00000065304 Krtap28-13A0A087WQP5 138 aa2.51□□□□□ -2.01
Rtn3-202ENSMUST00000065304 Krtap28-10A0A1Y7VP58 119 aa2.49□□□□□ -2.01
Rtn3-202ENSMUST00000065304 NebE9Q1W3 7152 aa2.44□□□□□ -2.02
Rtn3-202ENSMUST00000065304 Gm7544A0A1Y7VJ58 118 aa2.42□□□□□ -2.02
Rtn3-202ENSMUST00000065304 Gm11559Q9D3H7 191 aa2.37□□□□□ -2.03
Rtn3-202ENSMUST00000065304 A030014E15RikA0A1Y7VJV2 120 aa2.33□□□□□ -2.04
Rtn3-202ENSMUST00000065304 Hmcn1D3YXG0 5634 aa2.31□□□□□ -2.04
Rtn3-202ENSMUST00000065304 1110025L11RikO09048 78 aa2.31□□□□□ -2.04
Rtn3-202ENSMUST00000065304 Krtap6-5Q925H3 78 aa2.31□□□□□ -2.04
Rtn3-202ENSMUST00000065304 Krtap9-1Q64526 186 aa2.29□□□□□ -2.04
Rtn3-202ENSMUST00000065304 A030005L19RikA0A1Y7VIU2 113 aa2.25□□□□□ -2.05
Rtn3-202ENSMUST00000065304 Gm10229O08631 77 aa2.23□□□□□ -2.05
Rtn3-202ENSMUST00000065304 Phgr1Q8K0G7 91 aa2.19□□□□□ -2.06
Rtn3-202ENSMUST00000065304 Gm11568A2A4M2 211 aa2.12□□□□□ -2.07
Rtn3-202ENSMUST00000065304 Muc19Q6PZE0 7524 aa2.03□□□□□ -2.08
Rtn3-202ENSMUST00000065304 A0A286YCP9 139 aa2.03□□□□□ -2.08
Rtn3-202ENSMUST00000065304 Gm4553A0A1B0GSA9 284 aa2.02□□□□□ -2.09
Rtn3-202ENSMUST00000065304 Krtap5-2Q9D5Z7 189 aa2.01□□□□□ -2.09
Rtn3-202ENSMUST00000065304 Gm11567Q9D141 195 aa2□□□□□ -2.09
Rtn3-202ENSMUST00000065304 AhnakE9Q616 5656 aaKnown RBP1.92□□□□□ -2.1
Rtn3-202ENSMUST00000065304 Gm10153A0A1B0GRL1 320 aa1.82□□□□□ -2.12
Rtn3-202ENSMUST00000065304 Gm2431E9Q8S1 172 aa1.75□□□□□ -2.13
Rtn3-202ENSMUST00000065304 Krtap6-2O08884 159 aa1.75□□□□□ -2.13
Rtn3-202ENSMUST00000065304 Gm40460A0A1B0GR10 244 aa1.7□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Gm7579A0A1B0GRJ4 243 aa1.7□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Gm39115A0A1B0GSH7 232 aa1.7□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Krtap5-5Q2TA51 241 aa1.7□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Krtap5-4Q62220 223 aa1.7□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Gm45337A0A1B0GS71 263 aa1.68□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Gm45618A0A1B0GSA0 219 aa1.68□□□□□ -2.14
Rtn3-202ENSMUST00000065304 Krtap21-1Q925H4 128 aa1.52□□□□□ -2.17
Rtn3-202ENSMUST00000065304 Gm29735A0A1B0GT06 219 aa1.27□□□□□ -2.21
Rtn3-202ENSMUST00000065304 Krtap5-1Q64507 230 aa1.12□□□□□ -2.23
Rtn3-202ENSMUST00000065304 Gm4559A4IF42 199 aa0.83□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 266 ms