RNA–Protein interactions for RNA: ENSMUST00000050455.4

Rfx6-201, Transcript of DNA-binding protein RFX6, mousemouse

TSL 1 (best) BASIC

Gene Rfx6, Length 3,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6-201ENSMUST00000050455 Sprr2a3Q4KL71 83 aa2.49□□□□□ -2.01
Rfx6-201ENSMUST00000050455 Sprr2a1Q9CQK8 83 aa2.49□□□□□ -2.01
Rfx6-201ENSMUST00000050455 Gm40193A0A1B0GT39 78 aa2.48□□□□□ -2.01
Rfx6-201ENSMUST00000050455 SspoQ8CG65 4998 aa2.48□□□□□ -2.01
Rfx6-201ENSMUST00000050455 Krtap9-5A2A5X3 358 aa2.48□□□□□ -2.01
Rfx6-201ENSMUST00000050455 Spink7Q6IE32 76 aa2.45□□□□□ -2.02
Rfx6-201ENSMUST00000050455 Krtap12-1Q9Z287 130 aa2.43□□□□□ -2.02
Rfx6-201ENSMUST00000050455 Krtap19-9aF8WH65 55 aa2.41□□□□□ -2.02
Rfx6-201ENSMUST00000050455 Gm11596B1AQB0 205 aa2.39□□□□□ -2.03
Rfx6-201ENSMUST00000050455 Krtap5-1Q64507 230 aa2.37□□□□□ -2.03
Rfx6-201ENSMUST00000050455 Gm4553A0A1B0GSA9 284 aa2.36□□□□□ -2.03
Rfx6-201ENSMUST00000050455 Gm10061D3Z714 54 aa2.36□□□□□ -2.03
Rfx6-201ENSMUST00000050455 Krtap19-2Q925I0 141 aa2.35□□□□□ -2.03
Rfx6-201ENSMUST00000050455 Krtap9-1Q64526 186 aa2.34□□□□□ -2.04
Rfx6-201ENSMUST00000050455 Muc5bE9Q5I3 4800 aa2.3□□□□□ -2.04
Rfx6-201ENSMUST00000050455 Krtap4-6Q3V4B7 195 aa2.3□□□□□ -2.04
Rfx6-201ENSMUST00000050455 Camk2n1Q6QWF9 78 aa2.29□□□□□ -2.04
Rfx6-201ENSMUST00000050455 Krtap8-1O08633 61 aa2.24□□□□□ -2.05
Rfx6-201ENSMUST00000050455 Syne2Q6ZWQ0 6874 aaKnown RBP2.23□□□□□ -2.05
Rfx6-201ENSMUST00000050455 Gm4559A4IF42 199 aa2.23□□□□□ -2.05
Rfx6-201ENSMUST00000050455 Gm6358A0A087WPH4 74 aa2.22□□□□□ -2.05
Rfx6-201ENSMUST00000050455 Krtap5-2Q9D5Z7 189 aa2.22□□□□□ -2.05
Rfx6-201ENSMUST00000050455 Krtap19-9bQ99NG9 58 aa2.21□□□□□ -2.06
Rfx6-201ENSMUST00000050455 2300003K06RikA2A4M0 262 aa2.19□□□□□ -2.06
Rfx6-201ENSMUST00000050455 Tnp1P10856 55 aa2.18□□□□□ -2.06
Rfx6-201ENSMUST00000050455 Mt3P28184 68 aa2.17□□□□□ -2.06
Rfx6-201ENSMUST00000050455 Mt2P02798 61 aa2.16□□□□□ -2.06
Rfx6-201ENSMUST00000050455 Gm11568A2A4M2 211 aa2.16□□□□□ -2.06
Rfx6-201ENSMUST00000050455 Gm7579A0A1B0GRJ4 243 aa2.13□□□□□ -2.07
Rfx6-201ENSMUST00000050455 Mdn1A2ANY6 5589 aaKnown RBP2.13□□□□□ -2.07
Rfx6-201ENSMUST00000050455 2310046K23RikA0A0A6YVW6 87 aa2.08□□□□□ -2.08
Rfx6-201ENSMUST00000050455 Krtap6-3A0A087WQL6 57 aa2.06□□□□□ -2.08
Rfx6-201ENSMUST00000050455 Gm10142J3KMP7 120 aa2.05□□□□□ -2.08
Rfx6-201ENSMUST00000050455 Krtap22-2J3QNX6 67 aa2.05□□□□□ -2.08
Rfx6-201ENSMUST00000050455 Krtap9-3Q3V2C1 136 aa2.05□□□□□ -2.08
Rfx6-201ENSMUST00000050455 Krtap5-5Q2TA51 241 aa2.04□□□□□ -2.08
Rfx6-201ENSMUST00000050455 Gm11564A2A4L9 201 aa2.02□□□□□ -2.09
Rfx6-201ENSMUST00000050455 4933428G20RikQ9D3X4 101 aa1.98□□□□□ -2.09
Rfx6-201ENSMUST00000050455 Gpr98Q8VHN7 6298 aaKnown RBP1.97□□□□□ -2.09
Rfx6-201ENSMUST00000050455 Eppk1Q8R0W0 6548 aa1.94□□□□□ -2.1
Rfx6-201ENSMUST00000050455 Gm40460A0A1B0GR10 244 aa1.93□□□□□ -2.1
Rfx6-201ENSMUST00000050455 Krtap20-2E9Q0A8 60 aa1.9□□□□□ -2.1
Rfx6-201ENSMUST00000050455 Gm10272F7CZ33 110 aa1.9□□□□□ -2.1
Rfx6-201ENSMUST00000050455 Fsip2A2ARZ3 6995 aa1.9□□□□□ -2.11
Rfx6-201ENSMUST00000050455 Gm11938Q9D3H4 131 aa1.87□□□□□ -2.11
Rfx6-201ENSMUST00000050455 Mt4P47945 62 aa1.86□□□□□ -2.11
Rfx6-201ENSMUST00000050455 Sprr2gO70558 76 aa1.85□□□□□ -2.11
Rfx6-201ENSMUST00000050455 Sprr2dO70555 85 aa1.83□□□□□ -2.12
Rfx6-201ENSMUST00000050455 Syne1Q6ZWR6 8799 aa1.79□□□□□ -2.12
Rfx6-201ENSMUST00000050455 Sprr2kO70562 68 aa1.78□□□□□ -2.12
Rfx6-201ENSMUST00000050455 Lce3bQ9CQM7 98 aa1.77□□□□□ -2.13
Rfx6-201ENSMUST00000050455 Krtap19-4Q925H7 84 aa1.76□□□□□ -2.13
Rfx6-201ENSMUST00000050455 Sprr2iO70560 76 aa1.72□□□□□ -2.13
Rfx6-201ENSMUST00000050455 Gm11639A0A1D5RLM8 5808 aa1.7□□□□□ -2.14
Rfx6-201ENSMUST00000050455 Mt1P02802 61 aaKnown RBP1.65□□□□□ -2.14
Rfx6-201ENSMUST00000050455 Lce3cQ91V05 98 aa1.65□□□□□ -2.14
Rfx6-201ENSMUST00000050455 Lce3dE9Q8V1 98 aa1.65□□□□□ -2.15
Rfx6-201ENSMUST00000050455 ObscnA2AAJ9 8891 aaKnown RBP1.65□□□□□ -2.15
Rfx6-201ENSMUST00000050455 Lce3eF8VQJ0 98 aa1.63□□□□□ -2.15
Rfx6-201ENSMUST00000050455 Lce3fQ6PAI4 98 aa1.63□□□□□ -2.15
Rfx6-201ENSMUST00000050455 Kmt2dQ6PDK2 5588 aa1.63□□□□□ -2.15
Rfx6-201ENSMUST00000050455 Sprr2fO70557 76 aa1.62□□□□□ -2.15
Rfx6-201ENSMUST00000050455 Sprr2eO70556 76 aa1.6□□□□□ -2.15
Rfx6-201ENSMUST00000050455 Sprr2hO70559 108 aa1.58□□□□□ -2.16
Rfx6-201ENSMUST00000050455 Lce3aQ497I5 98 aa1.57□□□□□ -2.16
Rfx6-201ENSMUST00000050455 Macf1Q9QXZ0 7354 aaKnown RBP1.53□□□□□ -2.16
Rfx6-201ENSMUST00000050455 Krtap4-16Q91W93 202 aa1.49□□□□□ -2.17
Rfx6-201ENSMUST00000050455 Krtap6-5Q925H3 78 aa1.47□□□□□ -2.17
Rfx6-201ENSMUST00000050455 Gm10024A0A0A0MQA4 119 aa1.46□□□□□ -2.18
Rfx6-201ENSMUST00000050455 AhnakE9Q616 5656 aaKnown RBP1.37□□□□□ -2.19
Rfx6-201ENSMUST00000050455 DstQ91ZU6 7393 aaKnown RBP1.37□□□□□ -2.19
Rfx6-201ENSMUST00000050455 Muc19Q6PZE0 7524 aa1.36□□□□□ -2.19
Rfx6-201ENSMUST00000050455 Muc16A0A140LJ72 8478 aa1.27□□□□□ -2.21
Rfx6-201ENSMUST00000050455 1110025L11RikO09048 78 aa1.25□□□□□ -2.21
Rfx6-201ENSMUST00000050455 NebE9Q1W3 7152 aa1.25□□□□□ -2.21
Rfx6-201ENSMUST00000050455 Sprr2bO70554 98 aa1.12□□□□□ -2.23
Rfx6-201ENSMUST00000050455 Krtap6-2O08884 159 aa1.11□□□□□ -2.23
Rfx6-201ENSMUST00000050455 Gm10229O08631 77 aa1.1□□□□□ -2.23
Rfx6-201ENSMUST00000050455 Krtap21-1Q925H4 128 aa1.02□□□□□ -2.25
Rfx6-201ENSMUST00000050455 Phgr1Q8K0G7 91 aa0.93□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 88.1 ms