RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Krtap19-4Q925H7 84 aa3.19□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Lce1iQ9D6P5 149 aa3.19□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Lce1hQ9D6R3 140 aa3.19□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Syne2Q6ZWQ0 6874 aaKnown RBP3.19□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Lce3aQ497I5 98 aa3.18□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Gm10100J3QK64 120 aa3.18□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Fsip2A2ARZ3 6995 aa3.18□□□□□ -1.9
Sf3b3-201ENSMUST00000042012 Sprr2eO70556 76 aa3.15□□□□□ -1.91
Sf3b3-201ENSMUST00000042012 2300003K06RikA2A4M0 262 aa3.14□□□□□ -1.91
Sf3b3-201ENSMUST00000042012 Krtap4-7Q9D732 168 aa3.14□□□□□ -1.91
Sf3b3-201ENSMUST00000042012 Krtap4-13Q9D7P3 165 aa3.13□□□□□ -1.91
Sf3b3-201ENSMUST00000042012 Lce1eQ9D139 143 aa3.13□□□□□ -1.91
Sf3b3-201ENSMUST00000042012 Gm10142J3KMP7 120 aa3.05□□□□□ -1.92
Sf3b3-201ENSMUST00000042012 Krtap6-3A0A087WQL6 57 aa3.05□□□□□ -1.92
Sf3b3-201ENSMUST00000042012 Syne1Q6ZWR6 8799 aa3.03□□□□□ -1.92
Sf3b3-201ENSMUST00000042012 SspoQ8CG65 4998 aa3.01□□□□□ -1.93
Sf3b3-201ENSMUST00000042012 Lce1a2Q9D1K4 149 aa2.98□□□□□ -1.93
Sf3b3-201ENSMUST00000042012 Lce1a1Q9CQH5 143 aa2.98□□□□□ -1.93
Sf3b3-201ENSMUST00000042012 Eppk1Q8R0W0 6548 aa2.94□□□□□ -1.94
Sf3b3-201ENSMUST00000042012 Gm10024A0A0A0MQA4 119 aa2.92□□□□□ -1.94
Sf3b3-201ENSMUST00000042012 Lce1kJ3QP15 125 aa2.91□□□□□ -1.94
Sf3b3-201ENSMUST00000042012 Macf1Q9QXZ0 7354 aaKnown RBP2.89□□□□□ -1.95
Sf3b3-201ENSMUST00000042012 Gm11938Q9D3H4 131 aa2.8□□□□□ -1.96
Sf3b3-201ENSMUST00000042012 Gm11554B1AQB2 190 aa2.79□□□□□ -1.96
Sf3b3-201ENSMUST00000042012 DstQ91ZU6 7393 aaKnown RBP2.77□□□□□ -1.97
Sf3b3-201ENSMUST00000042012 Sprr2hO70559 108 aa2.76□□□□□ -1.97
Sf3b3-201ENSMUST00000042012 Mt3P28184 68 aa2.75□□□□□ -1.97
Sf3b3-201ENSMUST00000042012 Gm11555B1AQ89 175 aa2.74□□□□□ -1.97
Sf3b3-201ENSMUST00000042012 Muc16A0A140LJ72 8478 aa2.71□□□□□ -1.98
Sf3b3-201ENSMUST00000042012 Krtap20-2E9Q0A8 60 aa2.69□□□□□ -1.98
Sf3b3-201ENSMUST00000042012 NebE9Q1W3 7152 aa2.65□□□□□ -1.98
Sf3b3-201ENSMUST00000042012 ObscnA2AAJ9 8891 aaKnown RBP2.62□□□□□ -1.99
Sf3b3-201ENSMUST00000042012 Kmt2dQ6PDK2 5588 aa2.53□□□□□ -2
Sf3b3-201ENSMUST00000042012 Gpr98Q8VHN7 6298 aaKnown RBP2.51□□□□□ -2.01
Sf3b3-201ENSMUST00000042012 Sprr2dO70555 85 aa2.51□□□□□ -2.01
Sf3b3-201ENSMUST00000042012 Mt1P02802 61 aaKnown RBP2.47□□□□□ -2.01
Sf3b3-201ENSMUST00000042012 Sprr2bO70554 98 aa2.45□□□□□ -2.02
Sf3b3-201ENSMUST00000042012 Krtap31-1Q9D644 177 aa2.42□□□□□ -2.02
Sf3b3-201ENSMUST00000042012 Gm11639A0A1D5RLM8 5808 aa2.35□□□□□ -2.03
Sf3b3-201ENSMUST00000042012 Muc19Q6PZE0 7524 aa2.29□□□□□ -2.04
Sf3b3-201ENSMUST00000042012 Gm11559Q9D3H7 191 aa2.28□□□□□ -2.04
Sf3b3-201ENSMUST00000042012 Krtap31-2Q8CAY5 177 aa2.22□□□□□ -2.05
Sf3b3-201ENSMUST00000042012 Krtap4-16Q91W93 202 aa2.17□□□□□ -2.06
Sf3b3-201ENSMUST00000042012 A0A1Y7VJH8 109 aa2.11□□□□□ -2.07
Sf3b3-201ENSMUST00000042012 Hmcn1D3YXG0 5634 aa2.11□□□□□ -2.07
Sf3b3-201ENSMUST00000042012 Gm11568A2A4M2 211 aa2.1□□□□□ -2.07
Sf3b3-201ENSMUST00000042012 Krtap9-1Q64526 186 aa2.1□□□□□ -2.07
Sf3b3-201ENSMUST00000042012 Krtap5-2Q9D5Z7 189 aa2.04□□□□□ -2.08
Sf3b3-201ENSMUST00000042012 1110025L11RikO09048 78 aa2.01□□□□□ -2.09
Sf3b3-201ENSMUST00000042012 Krtap6-5Q925H3 78 aa2.01□□□□□ -2.09
Sf3b3-201ENSMUST00000042012 A030005L19RikA0A1Y7VIU2 113 aa1.98□□□□□ -2.09
Sf3b3-201ENSMUST00000042012 Gm4553A0A1B0GSA9 284 aa1.97□□□□□ -2.09
Sf3b3-201ENSMUST00000042012 Gm10229O08631 77 aa1.9□□□□□ -2.1
Sf3b3-201ENSMUST00000042012 A0A1Y7VLE6 161 aa1.9□□□□□ -2.11
Sf3b3-201ENSMUST00000042012 Gm2431E9Q8S1 172 aa1.89□□□□□ -2.11
Sf3b3-201ENSMUST00000042012 Gm10153A0A1B0GRL1 320 aa1.88□□□□□ -2.11
Sf3b3-201ENSMUST00000042012 AhnakE9Q616 5656 aaKnown RBP1.85□□□□□ -2.11
Sf3b3-201ENSMUST00000042012 Gm45337A0A1B0GS71 263 aa1.85□□□□□ -2.11
Sf3b3-201ENSMUST00000042012 Gm7544A0A1Y7VJ58 118 aa1.8□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 Gm40460A0A1B0GR10 244 aa1.78□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 Gm7579A0A1B0GRJ4 243 aa1.78□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 Krtap28-10A0A1Y7VP58 119 aa1.78□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 Krtap5-5Q2TA51 241 aa1.78□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 Krtap5-4Q62220 223 aa1.78□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 A030005K14RikA0A1Y7VNY1 122 aa1.78□□□□□ -2.12
Sf3b3-201ENSMUST00000042012 Krtap28-13A0A087WQP5 138 aa1.77□□□□□ -2.13
Sf3b3-201ENSMUST00000042012 A030003K21RikA0A1Y7VIM3 128 aa1.76□□□□□ -2.13
Sf3b3-201ENSMUST00000042012 A0A286YCP9 139 aa1.73□□□□□ -2.13
Sf3b3-201ENSMUST00000042012 A0A1Y7VJ07 166 aa1.72□□□□□ -2.13
Sf3b3-201ENSMUST00000042012 Gm39115A0A1B0GSH7 232 aa1.71□□□□□ -2.14
Sf3b3-201ENSMUST00000042012 Phgr1Q8K0G7 91 aa1.68□□□□□ -2.14
Sf3b3-201ENSMUST00000042012 Gm6217A0A1Y7VJK9 128 aa1.66□□□□□ -2.14
Sf3b3-201ENSMUST00000042012 A030014E15RikA0A1Y7VJV2 120 aa1.59□□□□□ -2.15
Sf3b3-201ENSMUST00000042012 Krtap6-2O08884 159 aa1.59□□□□□ -2.15
Sf3b3-201ENSMUST00000042012 Gm45618A0A1B0GSA0 219 aa1.54□□□□□ -2.16
Sf3b3-201ENSMUST00000042012 Krtap21-1Q925H4 128 aa1.41□□□□□ -2.18
Sf3b3-201ENSMUST00000042012 Gm11567Q9D141 195 aa1.41□□□□□ -2.18
Sf3b3-201ENSMUST00000042012 Gm29735A0A1B0GT06 219 aa1.32□□□□□ -2.2
Sf3b3-201ENSMUST00000042012 Krtap5-1Q64507 230 aa1.07□□□□□ -2.24
Sf3b3-201ENSMUST00000042012 Gm4559A4IF42 199 aa0.79□□□□□ -2.28
Retrieved 80 of 22,080 RNA–protein pairs in 225.8 ms