RNA–Protein interactions for RNA: ENSMUST00000040964.12

Ss18-202, Transcript of Protein SSXT, mousemouse

TSL 1 (best) BASIC

Gene Ss18, Length 4,153 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18-202ENSMUST00000040964 Gm11938Q9D3H4 131 aa3.75□□□□□ -1.81
Ss18-202ENSMUST00000040964 Mt4P47945 62 aa3.74□□□□□ -1.81
Ss18-202ENSMUST00000040964 Gm38119A0A0A6YX29 146 aa3.73□□□□□ -1.81
Ss18-202ENSMUST00000040964 Sprr2dO70555 85 aa3.72□□□□□ -1.81
Ss18-202ENSMUST00000040964 Sprr2iO70560 76 aa3.71□□□□□ -1.82
Ss18-202ENSMUST00000040964 Krtap4-9B1AQA9 244 aa3.7□□□□□ -1.82
Ss18-202ENSMUST00000040964 Lce1bQ9D149 137 aa3.7□□□□□ -1.82
Ss18-202ENSMUST00000040964 Mdn1A2ANY6 5589 aaKnown RBP3.7□□□□□ -1.82
Ss18-202ENSMUST00000040964 Syne2Q6ZWQ0 6874 aaKnown RBP3.65□□□□□ -1.82
Ss18-202ENSMUST00000040964 Lce3cQ91V05 98 aa3.65□□□□□ -1.83
Ss18-202ENSMUST00000040964 Gm6217A0A1Y7VJK9 128 aa3.64□□□□□ -1.83
Ss18-202ENSMUST00000040964 Lce3dE9Q8V1 98 aa3.63□□□□□ -1.83
Ss18-202ENSMUST00000040964 Krtap6-3A0A087WQL6 57 aa3.6□□□□□ -1.83
Ss18-202ENSMUST00000040964 2300003K06RikA2A4M0 262 aa3.57□□□□□ -1.84
Ss18-202ENSMUST00000040964 Lce3eF8VQJ0 98 aa3.56□□□□□ -1.84
Ss18-202ENSMUST00000040964 Lce3fQ6PAI4 98 aa3.56□□□□□ -1.84
Ss18-202ENSMUST00000040964 A030014E15RikA0A1Y7VJV2 120 aa3.55□□□□□ -1.84
Ss18-202ENSMUST00000040964 Gm10100J3QK64 120 aa3.54□□□□□ -1.84
Ss18-202ENSMUST00000040964 Krtap4-13Q9D7P3 165 aa3.53□□□□□ -1.84
Ss18-202ENSMUST00000040964 Lce1fB9EJP6 147 aa3.53□□□□□ -1.84
Ss18-202ENSMUST00000040964 Lce1cQ9D1C5 147 aa3.53□□□□□ -1.84
Ss18-202ENSMUST00000040964 Lce1lQ9D1G7 135 aa3.53□□□□□ -1.84
Ss18-202ENSMUST00000040964 Lce1dQ9D731 133 aa3.53□□□□□ -1.84
Ss18-202ENSMUST00000040964 Krtap4-7Q9D732 168 aa3.51□□□□□ -1.85
Ss18-202ENSMUST00000040964 Gm10142J3KMP7 120 aa3.48□□□□□ -1.85
Ss18-202ENSMUST00000040964 A0A286YCP9 139 aa3.46□□□□□ -1.86
Ss18-202ENSMUST00000040964 Lce3aQ497I5 98 aa3.45□□□□□ -1.86
Ss18-202ENSMUST00000040964 Lce1eQ9D139 143 aa3.39□□□□□ -1.87
Ss18-202ENSMUST00000040964 Lce1kJ3QP15 125 aa3.38□□□□□ -1.87
Ss18-202ENSMUST00000040964 Mt1P02802 61 aaKnown RBP3.33□□□□□ -1.88
Ss18-202ENSMUST00000040964 Krtap20-2E9Q0A8 60 aa3.27□□□□□ -1.89
Ss18-202ENSMUST00000040964 Lce1a1Q9CQH5 143 aa3.23□□□□□ -1.89
Ss18-202ENSMUST00000040964 Sprr2hO70559 108 aa3.22□□□□□ -1.89
Ss18-202ENSMUST00000040964 Mt3P28184 68 aa3.22□□□□□ -1.89
Ss18-202ENSMUST00000040964 Krtap5-2Q9D5Z7 189 aa3.2□□□□□ -1.9
Ss18-202ENSMUST00000040964 Fsip2A2ARZ3 6995 aa3.18□□□□□ -1.9
Ss18-202ENSMUST00000040964 Sprr2eO70556 76 aa3.14□□□□□ -1.91
Ss18-202ENSMUST00000040964 Syne1Q6ZWR6 8799 aa3.14□□□□□ -1.91
Ss18-202ENSMUST00000040964 Gm11568A2A4M2 211 aa3.08□□□□□ -1.92
Ss18-202ENSMUST00000040964 Krtap9-1Q64526 186 aa3.08□□□□□ -1.92
Ss18-202ENSMUST00000040964 Gm10024A0A0A0MQA4 119 aa3.07□□□□□ -1.92
Ss18-202ENSMUST00000040964 Gm11559Q9D3H7 191 aa3.04□□□□□ -1.92
Ss18-202ENSMUST00000040964 Gm4553A0A1B0GSA9 284 aa3.01□□□□□ -1.93
Ss18-202ENSMUST00000040964 ObscnA2AAJ9 8891 aaKnown RBP3.01□□□□□ -1.93
Ss18-202ENSMUST00000040964 Sprr2fO70557 76 aa3□□□□□ -1.93
Ss18-202ENSMUST00000040964 Eppk1Q8R0W0 6548 aa2.95□□□□□ -1.94
Ss18-202ENSMUST00000040964 Gm45337A0A1B0GS71 263 aa2.92□□□□□ -1.94
Ss18-202ENSMUST00000040964 Gm10153A0A1B0GRL1 320 aa2.9□□□□□ -1.94
Ss18-202ENSMUST00000040964 Gm11554B1AQB2 190 aa2.9□□□□□ -1.94
Ss18-202ENSMUST00000040964 Gm40460A0A1B0GR10 244 aa2.88□□□□□ -1.95
Ss18-202ENSMUST00000040964 Gm7579A0A1B0GRJ4 243 aa2.88□□□□□ -1.95
Ss18-202ENSMUST00000040964 Krtap5-5Q2TA51 241 aa2.88□□□□□ -1.95
Ss18-202ENSMUST00000040964 Krtap5-4Q62220 223 aa2.88□□□□□ -1.95
Ss18-202ENSMUST00000040964 Krtap31-1Q9D644 177 aa2.86□□□□□ -1.95
Ss18-202ENSMUST00000040964 Kmt2dQ6PDK2 5588 aa2.81□□□□□ -1.96
Ss18-202ENSMUST00000040964 Gm2431E9Q8S1 172 aa2.79□□□□□ -1.96
Ss18-202ENSMUST00000040964 Krtap31-2Q8CAY5 177 aa2.74□□□□□ -1.97
Ss18-202ENSMUST00000040964 Gm39115A0A1B0GSH7 232 aa2.69□□□□□ -1.98
Ss18-202ENSMUST00000040964 Sprr2bO70554 98 aa2.63□□□□□ -1.99
Ss18-202ENSMUST00000040964 1110025L11RikO09048 78 aa2.59□□□□□ -1.99
Ss18-202ENSMUST00000040964 Krtap6-5Q925H3 78 aa2.59□□□□□ -1.99
Ss18-202ENSMUST00000040964 Macf1Q9QXZ0 7354 aaKnown RBP2.52□□□□□ -2.01
Ss18-202ENSMUST00000040964 Gm45618A0A1B0GSA0 219 aa2.52□□□□□ -2.01
Ss18-202ENSMUST00000040964 Hmcn1D3YXG0 5634 aa2.49□□□□□ -2.01
Ss18-202ENSMUST00000040964 Krtap4-16Q91W93 202 aa2.47□□□□□ -2.01
Ss18-202ENSMUST00000040964 DstQ91ZU6 7393 aaKnown RBP2.47□□□□□ -2.01
Ss18-202ENSMUST00000040964 AhnakE9Q616 5656 aaKnown RBP2.34□□□□□ -2.03
Ss18-202ENSMUST00000040964 Gm10229O08631 77 aa2.34□□□□□ -2.04
Ss18-202ENSMUST00000040964 Gm11639A0A1D5RLM8 5808 aa2.33□□□□□ -2.04
Ss18-202ENSMUST00000040964 Gpr98Q8VHN7 6298 aaKnown RBP2.29□□□□□ -2.04
Ss18-202ENSMUST00000040964 Gm29735A0A1B0GT06 219 aa2.18□□□□□ -2.06
Ss18-202ENSMUST00000040964 NebE9Q1W3 7152 aa2.13□□□□□ -2.07
Ss18-202ENSMUST00000040964 Muc16A0A140LJ72 8478 aa2.1□□□□□ -2.07
Ss18-202ENSMUST00000040964 Muc19Q6PZE0 7524 aa2.06□□□□□ -2.08
Ss18-202ENSMUST00000040964 Krtap21-1Q925H4 128 aa2.04□□□□□ -2.08
Ss18-202ENSMUST00000040964 Gm11567Q9D141 195 aa1.98□□□□□ -2.09
Ss18-202ENSMUST00000040964 Krtap6-2O08884 159 aa1.97□□□□□ -2.09
Ss18-202ENSMUST00000040964 Phgr1Q8K0G7 91 aa1.89□□□□□ -2.11
Ss18-202ENSMUST00000040964 Krtap5-1Q64507 230 aa1.76□□□□□ -2.13
Ss18-202ENSMUST00000040964 Gm4559A4IF42 199 aa1.67□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 13 ms