RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 Lce1iQ9D6P5 149 aa2.53□□□□□ -2
Usp40-201ENSMUST00000040783 A0A1Y7VJH8 109 aa2.53□□□□□ -2
Usp40-201ENSMUST00000040783 Sprr2fO70557 76 aa2.51□□□□□ -2.01
Usp40-201ENSMUST00000040783 ZanO88799 5376 aa2.49□□□□□ -2.01
Usp40-201ENSMUST00000040783 Lce1eQ9D139 143 aa2.48□□□□□ -2.01
Usp40-201ENSMUST00000040783 Krtap28-13A0A087WQP5 138 aa2.48□□□□□ -2.01
Usp40-201ENSMUST00000040783 Krtap28-10A0A1Y7VP58 119 aa2.47□□□□□ -2.01
Usp40-201ENSMUST00000040783 Lce1a2Q9D1K4 149 aa2.46□□□□□ -2.02
Usp40-201ENSMUST00000040783 Sprr2eO70556 76 aa2.46□□□□□ -2.02
Usp40-201ENSMUST00000040783 Gm11596B1AQB0 205 aa2.45□□□□□ -2.02
Usp40-201ENSMUST00000040783 Eppk1Q8R0W0 6548 aa2.45□□□□□ -2.02
Usp40-201ENSMUST00000040783 A0A1Y7VLE6 161 aa2.45□□□□□ -2.02
Usp40-201ENSMUST00000040783 Gm11938Q9D3H4 131 aa2.44□□□□□ -2.02
Usp40-201ENSMUST00000040783 Gm10024A0A0A0MQA4 119 aa2.44□□□□□ -2.02
Usp40-201ENSMUST00000040783 Krtap19-4Q925H7 84 aa2.44□□□□□ -2.02
Usp40-201ENSMUST00000040783 A030005K14RikA0A1Y7VNY1 122 aa2.44□□□□□ -2.02
Usp40-201ENSMUST00000040783 Gm11564A2A4L9 201 aa2.41□□□□□ -2.02
Usp40-201ENSMUST00000040783 Gm11595B1AQA7 289 aa2.41□□□□□ -2.02
Usp40-201ENSMUST00000040783 Krtap4-8B1AQA8 209 aa2.41□□□□□ -2.02
Usp40-201ENSMUST00000040783 Muc5bE9Q5I3 4800 aa2.39□□□□□ -2.03
Usp40-201ENSMUST00000040783 Krtap4-9B1AQA9 244 aa2.38□□□□□ -2.03
Usp40-201ENSMUST00000040783 Gpr98Q8VHN7 6298 aaKnown RBP2.36□□□□□ -2.03
Usp40-201ENSMUST00000040783 2300003K06RikA2A4M0 262 aa2.36□□□□□ -2.03
Usp40-201ENSMUST00000040783 Sprr2dO70555 85 aa2.34□□□□□ -2.03
Usp40-201ENSMUST00000040783 Fsip2A2ARZ3 6995 aa2.34□□□□□ -2.04
Usp40-201ENSMUST00000040783 A0A1Y7VJ07 166 aa2.33□□□□□ -2.04
Usp40-201ENSMUST00000040783 Syne2Q6ZWQ0 6874 aaKnown RBP2.32□□□□□ -2.04
Usp40-201ENSMUST00000040783 Krtap4-13Q9D7P3 165 aa2.31□□□□□ -2.04
Usp40-201ENSMUST00000040783 Mt3P28184 68 aa2.25□□□□□ -2.05
Usp40-201ENSMUST00000040783 Sprr2hO70559 108 aa2.24□□□□□ -2.05
Usp40-201ENSMUST00000040783 Lce1kJ3QP15 125 aa2.24□□□□□ -2.05
Usp40-201ENSMUST00000040783 Gm7544A0A1Y7VJ58 118 aa2.24□□□□□ -2.05
Usp40-201ENSMUST00000040783 A030014E15RikA0A1Y7VJV2 120 aa2.24□□□□□ -2.05
Usp40-201ENSMUST00000040783 Lce1a1Q9CQH5 143 aa2.24□□□□□ -2.05
Usp40-201ENSMUST00000040783 A030005L19RikA0A1Y7VIU2 113 aa2.23□□□□□ -2.05
Usp40-201ENSMUST00000040783 SspoQ8CG65 4998 aa2.23□□□□□ -2.05
Usp40-201ENSMUST00000040783 Syne1Q6ZWR6 8799 aa2.22□□□□□ -2.05
Usp40-201ENSMUST00000040783 Krtap6-3A0A087WQL6 57 aa2.2□□□□□ -2.06
Usp40-201ENSMUST00000040783 Krtap4-16Q91W93 202 aa2.15□□□□□ -2.07
Usp40-201ENSMUST00000040783 A030003K21RikA0A1Y7VIM3 128 aa2.12□□□□□ -2.07
Usp40-201ENSMUST00000040783 Macf1Q9QXZ0 7354 aaKnown RBP2.1□□□□□ -2.07
Usp40-201ENSMUST00000040783 Gm11554B1AQB2 190 aa2.05□□□□□ -2.08
Usp40-201ENSMUST00000040783 DstQ91ZU6 7393 aaKnown RBP2.03□□□□□ -2.08
Usp40-201ENSMUST00000040783 Gm6217A0A1Y7VJK9 128 aa2.02□□□□□ -2.09
Usp40-201ENSMUST00000040783 Krtap20-2E9Q0A8 60 aa2.01□□□□□ -2.09
Usp40-201ENSMUST00000040783 Mt1P02802 61 aaKnown RBP1.98□□□□□ -2.09
Usp40-201ENSMUST00000040783 Muc16A0A140LJ72 8478 aa1.93□□□□□ -2.1
Usp40-201ENSMUST00000040783 Gm11639A0A1D5RLM8 5808 aa1.9□□□□□ -2.11
Usp40-201ENSMUST00000040783 ObscnA2AAJ9 8891 aaKnown RBP1.87□□□□□ -2.11
Usp40-201ENSMUST00000040783 Sprr2bO70554 98 aa1.86□□□□□ -2.11
Usp40-201ENSMUST00000040783 NebE9Q1W3 7152 aa1.85□□□□□ -2.11
Usp40-201ENSMUST00000040783 A0A286YCP9 139 aa1.83□□□□□ -2.12
Usp40-201ENSMUST00000040783 Kmt2dQ6PDK2 5588 aa1.81□□□□□ -2.12
Usp40-201ENSMUST00000040783 Muc19Q6PZE0 7524 aa1.71□□□□□ -2.14
Usp40-201ENSMUST00000040783 Gm11559Q9D3H7 191 aa1.68□□□□□ -2.14
Usp40-201ENSMUST00000040783 Gm11568A2A4M2 211 aa1.66□□□□□ -2.14
Usp40-201ENSMUST00000040783 Hmcn1D3YXG0 5634 aa1.63□□□□□ -2.15
Usp40-201ENSMUST00000040783 1110025L11RikO09048 78 aa1.62□□□□□ -2.15
Usp40-201ENSMUST00000040783 Krtap6-5Q925H3 78 aa1.62□□□□□ -2.15
Usp40-201ENSMUST00000040783 Krtap9-1Q64526 186 aa1.62□□□□□ -2.15
Usp40-201ENSMUST00000040783 Gm10229O08631 77 aa1.53□□□□□ -2.16
Usp40-201ENSMUST00000040783 Krtap5-2Q9D5Z7 189 aa1.52□□□□□ -2.17
Usp40-201ENSMUST00000040783 Gm11567Q9D141 195 aa1.48□□□□□ -2.17
Usp40-201ENSMUST00000040783 Gm4553A0A1B0GSA9 284 aa1.45□□□□□ -2.18
Usp40-201ENSMUST00000040783 Phgr1Q8K0G7 91 aa1.41□□□□□ -2.18
Usp40-201ENSMUST00000040783 Gm2431E9Q8S1 172 aa1.36□□□□□ -2.19
Usp40-201ENSMUST00000040783 AhnakE9Q616 5656 aaKnown RBP1.33□□□□□ -2.2
Usp40-201ENSMUST00000040783 Gm10153A0A1B0GRL1 320 aa1.33□□□□□ -2.2
Usp40-201ENSMUST00000040783 Gm45618A0A1B0GSA0 219 aa1.29□□□□□ -2.2
Usp40-201ENSMUST00000040783 Gm39115A0A1B0GSH7 232 aa1.29□□□□□ -2.2
Usp40-201ENSMUST00000040783 Gm45337A0A1B0GS71 263 aa1.28□□□□□ -2.21
Usp40-201ENSMUST00000040783 Gm29735A0A1B0GT06 219 aa1.25□□□□□ -2.21
Usp40-201ENSMUST00000040783 Krtap6-2O08884 159 aa1.25□□□□□ -2.21
Usp40-201ENSMUST00000040783 Gm40460A0A1B0GR10 244 aa1.24□□□□□ -2.21
Usp40-201ENSMUST00000040783 Gm7579A0A1B0GRJ4 243 aa1.24□□□□□ -2.21
Usp40-201ENSMUST00000040783 Krtap5-5Q2TA51 241 aa1.24□□□□□ -2.21
Usp40-201ENSMUST00000040783 Krtap5-4Q62220 223 aa1.24□□□□□ -2.21
Usp40-201ENSMUST00000040783 Krtap21-1Q925H4 128 aa1.15□□□□□ -2.23
Usp40-201ENSMUST00000040783 Krtap5-1Q64507 230 aa0.93□□□□□ -2.26
Usp40-201ENSMUST00000040783 Gm4559A4IF42 199 aa0.87□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 83.8 ms