RNA–Protein interactions for RNA: ENSMUST00000037811.12

Apob-202, Transcript of Apolipoprotein B-100, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Apob, Length 13,934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Apob-202ENSMUST00000037811 Gm11596B1AQB0 205 aa1.59□□□□□ -2.15
Apob-202ENSMUST00000037811 Gpr98Q8VHN7 6298 aaKnown RBP1.56□□□□□ -2.16
Apob-202ENSMUST00000037811 A0A1Y7VLE6 161 aa1.55□□□□□ -2.16
Apob-202ENSMUST00000037811 Abca13Q5SSE9 5034 aa1.55□□□□□ -2.16
Apob-202ENSMUST00000037811 Fsip2A2ARZ3 6995 aa1.54□□□□□ -2.16
Apob-202ENSMUST00000037811 Krtap6-3A0A087WQL6 57 aa1.54□□□□□ -2.16
Apob-202ENSMUST00000037811 Rnf213E9Q555 5152 aaKnown RBP1.54□□□□□ -2.16
Apob-202ENSMUST00000037811 Gm11564A2A4L9 201 aa1.53□□□□□ -2.16
Apob-202ENSMUST00000037811 Gm11563B1AQ90 168 aa1.53□□□□□ -2.16
Apob-202ENSMUST00000037811 Gm11595B1AQA7 289 aa1.53□□□□□ -2.16
Apob-202ENSMUST00000037811 Krtap4-8B1AQA8 209 aa1.53□□□□□ -2.16
Apob-202ENSMUST00000037811 Krtap4-1Q3UUY3 169 aa1.53□□□□□ -2.16
Apob-202ENSMUST00000037811 Krtap4-7Q9D732 168 aa1.53□□□□□ -2.16
Apob-202ENSMUST00000037811 Gm11938Q9D3H4 131 aa1.52□□□□□ -2.17
Apob-202ENSMUST00000037811 Mt3P28184 68 aa1.51□□□□□ -2.17
Apob-202ENSMUST00000037811 Fat4Q2PZL6 4981 aa1.51□□□□□ -2.17
Apob-202ENSMUST00000037811 Krtap31-1Q9D644 177 aa1.51□□□□□ -2.17
Apob-202ENSMUST00000037811 Krtap17-1A2A5X6 109 aa1.5□□□□□ -2.17
Apob-202ENSMUST00000037811 2300003K06RikA2A4M0 262 aa1.5□□□□□ -2.17
Apob-202ENSMUST00000037811 Krtap4-9B1AQA9 244 aa1.5□□□□□ -2.17
Apob-202ENSMUST00000037811 Lce1a2Q9D1K4 149 aa1.48□□□□□ -2.17
Apob-202ENSMUST00000037811 A030003K21RikA0A1Y7VIM3 128 aa1.47□□□□□ -2.17
Apob-202ENSMUST00000037811 Sprr2dO70555 85 aa1.46□□□□□ -2.18
Apob-202ENSMUST00000037811 Lce1a1Q9CQH5 143 aa1.46□□□□□ -2.18
Apob-202ENSMUST00000037811 Krtap4-13Q9D7P3 165 aa1.45□□□□□ -2.18
Apob-202ENSMUST00000037811 Gm11639A0A1D5RLM8 5808 aa1.44□□□□□ -2.18
Apob-202ENSMUST00000037811 SspoQ8CG65 4998 aa1.44□□□□□ -2.18
Apob-202ENSMUST00000037811 Lce1kJ3QP15 125 aa1.42□□□□□ -2.18
Apob-202ENSMUST00000037811 Sprr2bO70554 98 aa1.39□□□□□ -2.19
Apob-202ENSMUST00000037811 Gm6217A0A1Y7VJK9 128 aa1.38□□□□□ -2.19
Apob-202ENSMUST00000037811 Mt1P02802 61 aaKnown RBP1.37□□□□□ -2.19
Apob-202ENSMUST00000037811 Ush2AQ2QI47 5193 aa1.37□□□□□ -2.19
Apob-202ENSMUST00000037811 Krtap20-2E9Q0A8 60 aa1.35□□□□□ -2.19
Apob-202ENSMUST00000037811 Hmcn2A2AJ76 5100 aa1.35□□□□□ -2.19
Apob-202ENSMUST00000037811 Gm11554B1AQB2 190 aa1.31□□□□□ -2.2
Apob-202ENSMUST00000037811 DstQ91ZU6 7393 aaKnown RBP1.31□□□□□ -2.2
Apob-202ENSMUST00000037811 Krtap28-10A0A1Y7VP58 119 aa1.3□□□□□ -2.2
Apob-202ENSMUST00000037811 Krtap4-16Q91W93 202 aa1.3□□□□□ -2.2
Apob-202ENSMUST00000037811 Syne1Q6ZWR6 8799 aa1.29□□□□□ -2.2
Apob-202ENSMUST00000037811 A030005K14RikA0A1Y7VNY1 122 aa1.28□□□□□ -2.2
Apob-202ENSMUST00000037811 Macf1Q9QXZ0 7354 aaKnown RBP1.27□□□□□ -2.21
Apob-202ENSMUST00000037811 Kmt2dQ6PDK2 5588 aa1.26□□□□□ -2.21
Apob-202ENSMUST00000037811 ObscnA2AAJ9 8891 aaKnown RBP1.26□□□□□ -2.21
Apob-202ENSMUST00000037811 NebE9Q1W3 7152 aa1.25□□□□□ -2.21
Apob-202ENSMUST00000037811 Hmcn1D3YXG0 5634 aa1.21□□□□□ -2.22
Apob-202ENSMUST00000037811 A030005L19RikA0A1Y7VIU2 113 aa1.19□□□□□ -2.22
Apob-202ENSMUST00000037811 Gm11555B1AQ89 175 aa1.17□□□□□ -2.22
Apob-202ENSMUST00000037811 Krtap28-13A0A087WQP5 138 aa1.16□□□□□ -2.22
Apob-202ENSMUST00000037811 Gm7544A0A1Y7VJ58 118 aa1.13□□□□□ -2.23
Apob-202ENSMUST00000037811 A0A1Y7VJ07 166 aa1.13□□□□□ -2.23
Apob-202ENSMUST00000037811 AhnakE9Q616 5656 aaKnown RBP1.09□□□□□ -2.23
Apob-202ENSMUST00000037811 A0A1Y7VJH8 109 aa1.09□□□□□ -2.24
Apob-202ENSMUST00000037811 1110025L11RikO09048 78 aa1.09□□□□□ -2.24
Apob-202ENSMUST00000037811 Krtap6-5Q925H3 78 aa1.09□□□□□ -2.24
Apob-202ENSMUST00000037811 Gm11559Q9D3H7 191 aa1.07□□□□□ -2.24
Apob-202ENSMUST00000037811 Gm10229O08631 77 aa1.05□□□□□ -2.24
Apob-202ENSMUST00000037811 Krtap5-2Q9D5Z7 189 aa1.01□□□□□ -2.25
Apob-202ENSMUST00000037811 Krtap9-1Q64526 186 aa1□□□□□ -2.25
Apob-202ENSMUST00000037811 Muc19Q6PZE0 7524 aa1□□□□□ -2.25
Apob-202ENSMUST00000037811 A030014E15RikA0A1Y7VJV2 120 aa0.98□□□□□ -2.25
Apob-202ENSMUST00000037811 Phgr1Q8K0G7 91 aa0.97□□□□□ -2.25
Apob-202ENSMUST00000037811 Gm4553A0A1B0GSA9 284 aa0.96□□□□□ -2.26
Apob-202ENSMUST00000037811 Muc16A0A140LJ72 8478 aa0.93□□□□□ -2.26
Apob-202ENSMUST00000037811 Gm45337A0A1B0GS71 263 aa0.92□□□□□ -2.26
Apob-202ENSMUST00000037811 Gm11568A2A4M2 211 aa0.9□□□□□ -2.27
Apob-202ENSMUST00000037811 Gm10153A0A1B0GRL1 320 aa0.9□□□□□ -2.27
Apob-202ENSMUST00000037811 Gm40460A0A1B0GR10 244 aa0.89□□□□□ -2.27
Apob-202ENSMUST00000037811 Gm7579A0A1B0GRJ4 243 aa0.89□□□□□ -2.27
Apob-202ENSMUST00000037811 Krtap5-5Q2TA51 241 aa0.89□□□□□ -2.27
Apob-202ENSMUST00000037811 Krtap5-4Q62220 223 aa0.89□□□□□ -2.27
Apob-202ENSMUST00000037811 Gm39115A0A1B0GSH7 232 aa0.88□□□□□ -2.27
Apob-202ENSMUST00000037811 A0A286YCP9 139 aa0.85□□□□□ -2.27
Apob-202ENSMUST00000037811 Krtap6-2O08884 159 aa0.84□□□□□ -2.28
Apob-202ENSMUST00000037811 Gm2431E9Q8S1 172 aa0.79□□□□□ -2.28
Apob-202ENSMUST00000037811 Gm45618A0A1B0GSA0 219 aa0.78□□□□□ -2.28
Apob-202ENSMUST00000037811 Gm29735A0A1B0GT06 219 aa0.75□□□□□ -2.29
Apob-202ENSMUST00000037811 Krtap21-1Q925H4 128 aa0.71□□□□□ -2.3
Apob-202ENSMUST00000037811 Gm11567Q9D141 195 aa0.66□□□□□ -2.3
Apob-202ENSMUST00000037811 Krtap5-1Q64507 230 aa0.47□□□□□ -2.33
Apob-202ENSMUST00000037811 Gm4559A4IF42 199 aa0.4□□□□□ -2.35
Retrieved 80 of 22,080 RNA–protein pairs in 7.7 ms