RNA–Protein interactions for RNA: ENSMUST00000028799.11

Knl1-201, Transcript of Kinetochore scaffold 1, mousemouse

TSL 1 (best) BASIC

Gene Knl1, Length 5,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1-201ENSMUST00000028799 Krtap4-6Q3V4B7 195 aa4.82□□□□□ -1.64
Knl1-201ENSMUST00000028799 Krtap17-1A2A5X6 109 aa4.82□□□□□ -1.64
Knl1-201ENSMUST00000028799 Sprr2fO70557 76 aa4.79□□□□□ -1.64
Knl1-201ENSMUST00000028799 Krtap4-2B1AQ85 167 aa4.77□□□□□ -1.65
Knl1-201ENSMUST00000028799 Krtap31-1Q9D644 177 aa4.76□□□□□ -1.65
Knl1-201ENSMUST00000028799 Muc5bE9Q5I3 4800 aa4.73□□□□□ -1.65
Knl1-201ENSMUST00000028799 Rnf213E9Q555 5152 aaKnown RBP4.7□□□□□ -1.66
Knl1-201ENSMUST00000028799 Mdn1A2ANY6 5589 aaKnown RBP4.67□□□□□ -1.66
Knl1-201ENSMUST00000028799 Krtap4-1Q3UUY3 169 aa4.66□□□□□ -1.66
Knl1-201ENSMUST00000028799 Ush2AQ2QI47 5193 aa4.61□□□□□ -1.67
Knl1-201ENSMUST00000028799 Gm11596B1AQB0 205 aa4.56□□□□□ -1.68
Knl1-201ENSMUST00000028799 Gm11564A2A4L9 201 aa4.55□□□□□ -1.68
Knl1-201ENSMUST00000028799 Gm11563B1AQ90 168 aa4.55□□□□□ -1.68
Knl1-201ENSMUST00000028799 Gm11595B1AQA7 289 aa4.55□□□□□ -1.68
Knl1-201ENSMUST00000028799 Krtap4-8B1AQA8 209 aa4.55□□□□□ -1.68
Knl1-201ENSMUST00000028799 Gm6217A0A1Y7VJK9 128 aa4.54□□□□□ -1.68
Knl1-201ENSMUST00000028799 2300003K06RikA2A4M0 262 aa4.53□□□□□ -1.68
Knl1-201ENSMUST00000028799 Krtap4-9B1AQA9 244 aa4.49□□□□□ -1.69
Knl1-201ENSMUST00000028799 SspoQ8CG65 4998 aa4.48□□□□□ -1.69
Knl1-201ENSMUST00000028799 Lce1kJ3QP15 125 aa4.47□□□□□ -1.69
Knl1-201ENSMUST00000028799 Krtap4-7Q9D732 168 aa4.45□□□□□ -1.7
Knl1-201ENSMUST00000028799 Mt3P28184 68 aa4.44□□□□□ -1.7
Knl1-201ENSMUST00000028799 Krtap4-13Q9D7P3 165 aa4.35□□□□□ -1.71
Knl1-201ENSMUST00000028799 Mt1P02802 61 aaKnown RBP4.3□□□□□ -1.72
Knl1-201ENSMUST00000028799 Syne1Q6ZWR6 8799 aa4.29□□□□□ -1.72
Knl1-201ENSMUST00000028799 Krtap4-16Q91W93 202 aa4.27□□□□□ -1.73
Knl1-201ENSMUST00000028799 Lce1a1Q9CQH5 143 aa4.26□□□□□ -1.73
Knl1-201ENSMUST00000028799 A0A1Y7VJH8 109 aa4.17□□□□□ -1.74
Knl1-201ENSMUST00000028799 Krtap28-10A0A1Y7VP58 119 aa4.14□□□□□ -1.75
Knl1-201ENSMUST00000028799 Syne2Q6ZWQ0 6874 aaKnown RBP4.13□□□□□ -1.75
Knl1-201ENSMUST00000028799 Krtap6-3A0A087WQL6 57 aa4.1□□□□□ -1.75
Knl1-201ENSMUST00000028799 A0A1Y7VJ07 166 aa4.06□□□□□ -1.76
Knl1-201ENSMUST00000028799 Fsip2A2ARZ3 6995 aa4.03□□□□□ -1.76
Knl1-201ENSMUST00000028799 Krtap28-13A0A087WQP5 138 aa4□□□□□ -1.77
Knl1-201ENSMUST00000028799 A030005K14RikA0A1Y7VNY1 122 aa3.99□□□□□ -1.77
Knl1-201ENSMUST00000028799 Gm7544A0A1Y7VJ58 118 aa3.93□□□□□ -1.78
Knl1-201ENSMUST00000028799 Sprr2bO70554 98 aa3.92□□□□□ -1.78
Knl1-201ENSMUST00000028799 Krtap20-2E9Q0A8 60 aa3.89□□□□□ -1.79
Knl1-201ENSMUST00000028799 Krtap31-2Q8CAY5 177 aa3.89□□□□□ -1.79
Knl1-201ENSMUST00000028799 ObscnA2AAJ9 8891 aaKnown RBP3.84□□□□□ -1.79
Knl1-201ENSMUST00000028799 Gm11554B1AQB2 190 aa3.81□□□□□ -1.8
Knl1-201ENSMUST00000028799 A030005L19RikA0A1Y7VIU2 113 aa3.81□□□□□ -1.8
Knl1-201ENSMUST00000028799 Gm11555B1AQ89 175 aa3.73□□□□□ -1.81
Knl1-201ENSMUST00000028799 A030014E15RikA0A1Y7VJV2 120 aa3.61□□□□□ -1.83
Knl1-201ENSMUST00000028799 1110025L11RikO09048 78 aa3.48□□□□□ -1.85
Knl1-201ENSMUST00000028799 Krtap6-5Q925H3 78 aa3.48□□□□□ -1.85
Knl1-201ENSMUST00000028799 Eppk1Q8R0W0 6548 aa3.43□□□□□ -1.86
Knl1-201ENSMUST00000028799 Kmt2dQ6PDK2 5588 aa3.35□□□□□ -1.87
Knl1-201ENSMUST00000028799 Muc16A0A140LJ72 8478 aa3.34□□□□□ -1.87
Knl1-201ENSMUST00000028799 Gm11568A2A4M2 211 aa3.33□□□□□ -1.88
Knl1-201ENSMUST00000028799 Krtap9-1Q64526 186 aa3.33□□□□□ -1.88
Knl1-201ENSMUST00000028799 DstQ91ZU6 7393 aaKnown RBP3.25□□□□□ -1.89
Knl1-201ENSMUST00000028799 Gm10229O08631 77 aa3.24□□□□□ -1.89
Knl1-201ENSMUST00000028799 Gm11559Q9D3H7 191 aa3.24□□□□□ -1.89
Knl1-201ENSMUST00000028799 Macf1Q9QXZ0 7354 aaKnown RBP3.14□□□□□ -1.91
Knl1-201ENSMUST00000028799 Krtap5-2Q9D5Z7 189 aa3.08□□□□□ -1.92
Knl1-201ENSMUST00000028799 A0A286YCP9 139 aa3.01□□□□□ -1.93
Knl1-201ENSMUST00000028799 Phgr1Q8K0G7 91 aa3□□□□□ -1.93
Knl1-201ENSMUST00000028799 NebE9Q1W3 7152 aa2.92□□□□□ -1.94
Knl1-201ENSMUST00000028799 Gm11639A0A1D5RLM8 5808 aa2.88□□□□□ -1.95
Knl1-201ENSMUST00000028799 Gm4553A0A1B0GSA9 284 aa2.86□□□□□ -1.95
Knl1-201ENSMUST00000028799 Gm10153A0A1B0GRL1 320 aa2.73□□□□□ -1.97
Knl1-201ENSMUST00000028799 Muc19Q6PZE0 7524 aa2.72□□□□□ -1.97
Knl1-201ENSMUST00000028799 Hmcn1D3YXG0 5634 aa2.72□□□□□ -1.97
Knl1-201ENSMUST00000028799 Gm2431E9Q8S1 172 aa2.67□□□□□ -1.98
Knl1-201ENSMUST00000028799 Krtap6-2O08884 159 aa2.6□□□□□ -1.99
Knl1-201ENSMUST00000028799 Gm45337A0A1B0GS71 263 aa2.59□□□□□ -1.99
Knl1-201ENSMUST00000028799 Gpr98Q8VHN7 6298 aaKnown RBP2.58□□□□□ -2
Knl1-201ENSMUST00000028799 Gm40460A0A1B0GR10 244 aa2.58□□□□□ -2
Knl1-201ENSMUST00000028799 Gm7579A0A1B0GRJ4 243 aa2.58□□□□□ -2
Knl1-201ENSMUST00000028799 Krtap5-5Q2TA51 241 aa2.58□□□□□ -2
Knl1-201ENSMUST00000028799 Krtap5-4Q62220 223 aa2.58□□□□□ -2
Knl1-201ENSMUST00000028799 Krtap21-1Q925H4 128 aa2.54□□□□□ -2
Knl1-201ENSMUST00000028799 AhnakE9Q616 5656 aaKnown RBP2.51□□□□□ -2.01
Knl1-201ENSMUST00000028799 Gm39115A0A1B0GSH7 232 aa2.33□□□□□ -2.04
Knl1-201ENSMUST00000028799 Gm11567Q9D141 195 aa2.25□□□□□ -2.05
Knl1-201ENSMUST00000028799 Gm29735A0A1B0GT06 219 aa1.98□□□□□ -2.09
Knl1-201ENSMUST00000028799 Gm45618A0A1B0GSA0 219 aa1.94□□□□□ -2.1
Knl1-201ENSMUST00000028799 Krtap5-1Q64507 230 aa1.35□□□□□ -2.19
Knl1-201ENSMUST00000028799 Gm4559A4IF42 199 aa1.14□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 47.4 ms