RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 4933428G20RikQ9D3X4 101 aa6.13□□□□□ -1.43
Chmp6-201ENSMUST00000026434 2300003K06RikA2A4M0 262 aa6.12□□□□□ -1.43
Chmp6-201ENSMUST00000026434 Gm38119A0A0A6YX29 146 aa6.04□□□□□ -1.44
Chmp6-201ENSMUST00000026434 Lce1dQ9D731 133 aa6.01□□□□□ -1.45
Chmp6-201ENSMUST00000026434 Lce1a1Q9CQH5 143 aa5.97□□□□□ -1.45
Chmp6-201ENSMUST00000026434 Krtap20-2E9Q0A8 60 aa5.96□□□□□ -1.46
Chmp6-201ENSMUST00000026434 Lce1eQ9D139 143 aa5.95□□□□□ -1.46
Chmp6-201ENSMUST00000026434 Krtap19-4Q925H7 84 aa5.92□□□□□ -1.46
Chmp6-201ENSMUST00000026434 Lce3bQ9CQM7 98 aa5.82□□□□□ -1.48
Chmp6-201ENSMUST00000026434 Eppk1Q8R0W0 6548 aa5.77□□□□□ -1.49
Chmp6-201ENSMUST00000026434 Syne1Q6ZWR6 8799 aa5.7□□□□□ -1.5
Chmp6-201ENSMUST00000026434 Lce1cQ9D1C5 147 aa5.66□□□□□ -1.5
Chmp6-201ENSMUST00000026434 Gm10100J3QK64 120 aa5.58□□□□□ -1.52
Chmp6-201ENSMUST00000026434 Lce3cQ91V05 98 aa5.52□□□□□ -1.53
Chmp6-201ENSMUST00000026434 A0A1Y7VJH8 109 aa5.51□□□□□ -1.53
Chmp6-201ENSMUST00000026434 Gm11639A0A1D5RLM8 5808 aa5.5□□□□□ -1.53
Chmp6-201ENSMUST00000026434 Lce3dE9Q8V1 98 aa5.46□□□□□ -1.53
Chmp6-201ENSMUST00000026434 Gm10142J3KMP7 120 aa5.46□□□□□ -1.53
Chmp6-201ENSMUST00000026434 Lce3eF8VQJ0 98 aa5.46□□□□□ -1.54
Chmp6-201ENSMUST00000026434 Lce3fQ6PAI4 98 aa5.46□□□□□ -1.54
Chmp6-201ENSMUST00000026434 Sprr2iO70560 76 aa5.44□□□□□ -1.54
Chmp6-201ENSMUST00000026434 A030005L19RikA0A1Y7VIU2 113 aa5.43□□□□□ -1.54
Chmp6-201ENSMUST00000026434 Lce1fB9EJP6 147 aa5.42□□□□□ -1.54
Chmp6-201ENSMUST00000026434 Macf1Q9QXZ0 7354 aaKnown RBP5.39□□□□□ -1.55
Chmp6-201ENSMUST00000026434 Gm11559Q9D3H7 191 aa5.38□□□□□ -1.55
Chmp6-201ENSMUST00000026434 Mt1P02802 61 aaKnown RBP5.36□□□□□ -1.55
Chmp6-201ENSMUST00000026434 Lce1kJ3QP15 125 aa5.35□□□□□ -1.55
Chmp6-201ENSMUST00000026434 Gm11554B1AQB2 190 aa5.34□□□□□ -1.55
Chmp6-201ENSMUST00000026434 Krtap5-2Q9D5Z7 189 aa5.33□□□□□ -1.56
Chmp6-201ENSMUST00000026434 Gpr98Q8VHN7 6298 aaKnown RBP5.33□□□□□ -1.56
Chmp6-201ENSMUST00000026434 Sprr2hO70559 108 aa5.33□□□□□ -1.56
Chmp6-201ENSMUST00000026434 Kmt2dQ6PDK2 5588 aa5.32□□□□□ -1.56
Chmp6-201ENSMUST00000026434 ObscnA2AAJ9 8891 aaKnown RBP5.29□□□□□ -1.56
Chmp6-201ENSMUST00000026434 Lce3aQ497I5 98 aa5.24□□□□□ -1.57
Chmp6-201ENSMUST00000026434 Muc19Q6PZE0 7524 aa5.18□□□□□ -1.58
Chmp6-201ENSMUST00000026434 Gm11568A2A4M2 211 aa5.17□□□□□ -1.58
Chmp6-201ENSMUST00000026434 Krtap9-1Q64526 186 aa5.17□□□□□ -1.58
Chmp6-201ENSMUST00000026434 Gm4553A0A1B0GSA9 284 aa5.16□□□□□ -1.58
Chmp6-201ENSMUST00000026434 Sprr2eO70556 76 aa5.16□□□□□ -1.58
Chmp6-201ENSMUST00000026434 Gm2431E9Q8S1 172 aa5.03□□□□□ -1.6
Chmp6-201ENSMUST00000026434 Gm10153A0A1B0GRL1 320 aa4.96□□□□□ -1.62
Chmp6-201ENSMUST00000026434 Gm45337A0A1B0GS71 263 aa4.87□□□□□ -1.63
Chmp6-201ENSMUST00000026434 Sprr2fO70557 76 aa4.87□□□□□ -1.63
Chmp6-201ENSMUST00000026434 Hmcn1D3YXG0 5634 aa4.87□□□□□ -1.63
Chmp6-201ENSMUST00000026434 Mt3P28184 68 aa4.86□□□□□ -1.63
Chmp6-201ENSMUST00000026434 NebE9Q1W3 7152 aa4.78□□□□□ -1.64
Chmp6-201ENSMUST00000026434 DstQ91ZU6 7393 aaKnown RBP4.74□□□□□ -1.65
Chmp6-201ENSMUST00000026434 Gm39115A0A1B0GSH7 232 aa4.72□□□□□ -1.65
Chmp6-201ENSMUST00000026434 Krtap31-1Q9D644 177 aa4.72□□□□□ -1.65
Chmp6-201ENSMUST00000026434 Gm40460A0A1B0GR10 244 aa4.71□□□□□ -1.66
Chmp6-201ENSMUST00000026434 Gm7579A0A1B0GRJ4 243 aa4.71□□□□□ -1.66
Chmp6-201ENSMUST00000026434 Krtap5-5Q2TA51 241 aa4.71□□□□□ -1.66
Chmp6-201ENSMUST00000026434 Krtap5-4Q62220 223 aa4.71□□□□□ -1.66
Chmp6-201ENSMUST00000026434 A0A1Y7VLE6 161 aa4.68□□□□□ -1.66
Chmp6-201ENSMUST00000026434 Krtap28-13A0A087WQP5 138 aa4.66□□□□□ -1.66
Chmp6-201ENSMUST00000026434 Krtap4-16Q91W93 202 aa4.65□□□□□ -1.67
Chmp6-201ENSMUST00000026434 A030005K14RikA0A1Y7VNY1 122 aa4.64□□□□□ -1.67
Chmp6-201ENSMUST00000026434 Gm10024A0A0A0MQA4 119 aa4.57□□□□□ -1.68
Chmp6-201ENSMUST00000026434 Krtap28-10A0A1Y7VP58 119 aa4.57□□□□□ -1.68
Chmp6-201ENSMUST00000026434 Gm45618A0A1B0GSA0 219 aa4.51□□□□□ -1.69
Chmp6-201ENSMUST00000026434 Krtap31-2Q8CAY5 177 aa4.49□□□□□ -1.69
Chmp6-201ENSMUST00000026434 AhnakE9Q616 5656 aaKnown RBP4.47□□□□□ -1.69
Chmp6-201ENSMUST00000026434 A030014E15RikA0A1Y7VJV2 120 aa4.29□□□□□ -1.72
Chmp6-201ENSMUST00000026434 A0A1Y7VJ07 166 aa4.27□□□□□ -1.73
Chmp6-201ENSMUST00000026434 Gm7544A0A1Y7VJ58 118 aa4.13□□□□□ -1.75
Chmp6-201ENSMUST00000026434 1110025L11RikO09048 78 aa4.1□□□□□ -1.75
Chmp6-201ENSMUST00000026434 Krtap6-5Q925H3 78 aa4.1□□□□□ -1.75
Chmp6-201ENSMUST00000026434 Sprr2bO70554 98 aa3.85□□□□□ -1.79
Chmp6-201ENSMUST00000026434 Muc16A0A140LJ72 8478 aa3.73□□□□□ -1.81
Chmp6-201ENSMUST00000026434 Gm10229O08631 77 aa3.63□□□□□ -1.83
Chmp6-201ENSMUST00000026434 Gm29735A0A1B0GT06 219 aa3.58□□□□□ -1.84
Chmp6-201ENSMUST00000026434 A0A286YCP9 139 aa3.47□□□□□ -1.85
Chmp6-201ENSMUST00000026434 Gm11567Q9D141 195 aa3.42□□□□□ -1.86
Chmp6-201ENSMUST00000026434 Krtap21-1Q925H4 128 aa3.35□□□□□ -1.87
Chmp6-201ENSMUST00000026434 A030003K21RikA0A1Y7VIM3 128 aa3.25□□□□□ -1.89
Chmp6-201ENSMUST00000026434 Gm6217A0A1Y7VJK9 128 aa3.14□□□□□ -1.91
Chmp6-201ENSMUST00000026434 Phgr1Q8K0G7 91 aa3.14□□□□□ -1.91
Chmp6-201ENSMUST00000026434 Krtap6-2O08884 159 aa3.08□□□□□ -1.92
Chmp6-201ENSMUST00000026434 Krtap5-1Q64507 230 aa2.87□□□□□ -1.95
Chmp6-201ENSMUST00000026434 Gm4559A4IF42 199 aa2.03□□□□□ -2.08
Retrieved 80 of 22,080 RNA–protein pairs in 1281.3 ms