RNA–Protein interactions for RNA: ENSMUST00000025279.5

Npc1-201, Transcript of Niemann-Pick C1 protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Npc1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1-201ENSMUST00000025279 Krtap4-6Q3V4B7 195 aa3.88□□□□□ -1.79
Npc1-201ENSMUST00000025279 Sprr2hO70559 108 aa3.87□□□□□ -1.79
Npc1-201ENSMUST00000025279 Krtap4-2B1AQ85 167 aa3.83□□□□□ -1.8
Npc1-201ENSMUST00000025279 4932415D10RikA0A1W2P6U8 4986 aa3.81□□□□□ -1.8
Npc1-201ENSMUST00000025279 Hmcn2A2AJ76 5100 aa3.81□□□□□ -1.8
Npc1-201ENSMUST00000025279 Fat4Q2PZL6 4981 aa3.78□□□□□ -1.8
Npc1-201ENSMUST00000025279 ZanO88799 5376 aa3.76□□□□□ -1.81
Npc1-201ENSMUST00000025279 Rnf213E9Q555 5152 aaKnown RBP3.75□□□□□ -1.81
Npc1-201ENSMUST00000025279 Gm11562A0PK51 136 aa3.74□□□□□ -1.81
Npc1-201ENSMUST00000025279 Krtap17-1A2A5X6 109 aa3.74□□□□□ -1.81
Npc1-201ENSMUST00000025279 Ush2AQ2QI47 5193 aa3.72□□□□□ -1.81
Npc1-201ENSMUST00000025279 Krtap4-1Q3UUY3 169 aa3.7□□□□□ -1.82
Npc1-201ENSMUST00000025279 A0A1Y7VJ07 166 aa3.67□□□□□ -1.82
Npc1-201ENSMUST00000025279 2300003K06RikA2A4M0 262 aa3.67□□□□□ -1.82
Npc1-201ENSMUST00000025279 Krtap4-16Q91W93 202 aa3.65□□□□□ -1.83
Npc1-201ENSMUST00000025279 Krtap4-9B1AQA9 244 aa3.63□□□□□ -1.83
Npc1-201ENSMUST00000025279 Krtap4-7Q9D732 168 aa3.62□□□□□ -1.83
Npc1-201ENSMUST00000025279 Gm11564A2A4L9 201 aa3.62□□□□□ -1.83
Npc1-201ENSMUST00000025279 Gm11563B1AQ90 168 aa3.62□□□□□ -1.83
Npc1-201ENSMUST00000025279 Gm11595B1AQA7 289 aa3.62□□□□□ -1.83
Npc1-201ENSMUST00000025279 Krtap4-8B1AQA8 209 aa3.62□□□□□ -1.83
Npc1-201ENSMUST00000025279 Muc5bE9Q5I3 4800 aa3.62□□□□□ -1.83
Npc1-201ENSMUST00000025279 Lce1kJ3QP15 125 aa3.61□□□□□ -1.83
Npc1-201ENSMUST00000025279 Fsip2A2ARZ3 6995 aa3.6□□□□□ -1.83
Npc1-201ENSMUST00000025279 Gm11596B1AQB0 205 aa3.59□□□□□ -1.83
Npc1-201ENSMUST00000025279 Krtap4-13Q9D7P3 165 aa3.54□□□□□ -1.84
Npc1-201ENSMUST00000025279 A030005K14RikA0A1Y7VNY1 122 aa3.53□□□□□ -1.84
Npc1-201ENSMUST00000025279 Mt3P28184 68 aa3.53□□□□□ -1.84
Npc1-201ENSMUST00000025279 ObscnA2AAJ9 8891 aaKnown RBP3.52□□□□□ -1.85
Npc1-201ENSMUST00000025279 Syne2Q6ZWQ0 6874 aaKnown RBP3.49□□□□□ -1.85
Npc1-201ENSMUST00000025279 Krtap28-10A0A1Y7VP58 119 aa3.49□□□□□ -1.85
Npc1-201ENSMUST00000025279 Krtap28-13A0A087WQP5 138 aa3.48□□□□□ -1.85
Npc1-201ENSMUST00000025279 A0A1Y7VJH8 109 aa3.48□□□□□ -1.85
Npc1-201ENSMUST00000025279 Lce1a1Q9CQH5 143 aa3.43□□□□□ -1.86
Npc1-201ENSMUST00000025279 Gm7544A0A1Y7VJ58 118 aa3.41□□□□□ -1.86
Npc1-201ENSMUST00000025279 A030014E15RikA0A1Y7VJV2 120 aa3.34□□□□□ -1.88
Npc1-201ENSMUST00000025279 SspoQ8CG65 4998 aa3.31□□□□□ -1.88
Npc1-201ENSMUST00000025279 Mt1P02802 61 aaKnown RBP3.3□□□□□ -1.88
Npc1-201ENSMUST00000025279 Gm11554B1AQB2 190 aa3.21□□□□□ -1.9
Npc1-201ENSMUST00000025279 Macf1Q9QXZ0 7354 aaKnown RBP3.2□□□□□ -1.9
Npc1-201ENSMUST00000025279 Sprr2bO70554 98 aa3.19□□□□□ -1.9
Npc1-201ENSMUST00000025279 Krtap6-3A0A087WQL6 57 aa3.16□□□□□ -1.9
Npc1-201ENSMUST00000025279 A030005L19RikA0A1Y7VIU2 113 aa3.14□□□□□ -1.91
Npc1-201ENSMUST00000025279 Gm11555B1AQ89 175 aa3.12□□□□□ -1.91
Npc1-201ENSMUST00000025279 Krtap20-2E9Q0A8 60 aa3.1□□□□□ -1.91
Npc1-201ENSMUST00000025279 DstQ91ZU6 7393 aaKnown RBP3.06□□□□□ -1.92
Npc1-201ENSMUST00000025279 Kmt2dQ6PDK2 5588 aa3.02□□□□□ -1.93
Npc1-201ENSMUST00000025279 Krtap31-2Q8CAY5 177 aa2.98□□□□□ -1.93
Npc1-201ENSMUST00000025279 NebE9Q1W3 7152 aa2.96□□□□□ -1.94
Npc1-201ENSMUST00000025279 Muc19Q6PZE0 7524 aa2.85□□□□□ -1.95
Npc1-201ENSMUST00000025279 A0A286YCP9 139 aa2.84□□□□□ -1.95
Npc1-201ENSMUST00000025279 Eppk1Q8R0W0 6548 aa2.83□□□□□ -1.96
Npc1-201ENSMUST00000025279 1110025L11RikO09048 78 aa2.71□□□□□ -1.98
Npc1-201ENSMUST00000025279 Krtap6-5Q925H3 78 aa2.71□□□□□ -1.98
Npc1-201ENSMUST00000025279 Gm10229O08631 77 aa2.56□□□□□ -2
Npc1-201ENSMUST00000025279 Gm11639A0A1D5RLM8 5808 aa2.5□□□□□ -2.01
Npc1-201ENSMUST00000025279 Phgr1Q8K0G7 91 aa2.47□□□□□ -2.01
Npc1-201ENSMUST00000025279 Gm11568A2A4M2 211 aa2.43□□□□□ -2.02
Npc1-201ENSMUST00000025279 Krtap9-1Q64526 186 aa2.43□□□□□ -2.02
Npc1-201ENSMUST00000025279 Gpr98Q8VHN7 6298 aaKnown RBP2.43□□□□□ -2.02
Npc1-201ENSMUST00000025279 Gm11559Q9D3H7 191 aa2.39□□□□□ -2.03
Npc1-201ENSMUST00000025279 Hmcn1D3YXG0 5634 aa2.25□□□□□ -2.05
Npc1-201ENSMUST00000025279 Krtap5-2Q9D5Z7 189 aa2.1□□□□□ -2.07
Npc1-201ENSMUST00000025279 Krtap6-2O08884 159 aa2.05□□□□□ -2.08
Npc1-201ENSMUST00000025279 Gm10153A0A1B0GRL1 320 aa1.97□□□□□ -2.09
Npc1-201ENSMUST00000025279 Gm4553A0A1B0GSA9 284 aa1.96□□□□□ -2.1
Npc1-201ENSMUST00000025279 AhnakE9Q616 5656 aaKnown RBP1.95□□□□□ -2.1
Npc1-201ENSMUST00000025279 Krtap21-1Q925H4 128 aa1.92□□□□□ -2.1
Npc1-201ENSMUST00000025279 Gm11567Q9D141 195 aa1.91□□□□□ -2.1
Npc1-201ENSMUST00000025279 Gm2431E9Q8S1 172 aa1.88□□□□□ -2.11
Npc1-201ENSMUST00000025279 Gm45337A0A1B0GS71 263 aa1.82□□□□□ -2.12
Npc1-201ENSMUST00000025279 Gm40460A0A1B0GR10 244 aa1.75□□□□□ -2.13
Npc1-201ENSMUST00000025279 Gm7579A0A1B0GRJ4 243 aa1.75□□□□□ -2.13
Npc1-201ENSMUST00000025279 Krtap5-5Q2TA51 241 aa1.75□□□□□ -2.13
Npc1-201ENSMUST00000025279 Krtap5-4Q62220 223 aa1.75□□□□□ -2.13
Npc1-201ENSMUST00000025279 Gm39115A0A1B0GSH7 232 aa1.61□□□□□ -2.15
Npc1-201ENSMUST00000025279 Gm45618A0A1B0GSA0 219 aa1.44□□□□□ -2.18
Npc1-201ENSMUST00000025279 Gm29735A0A1B0GT06 219 aa1.33□□□□□ -2.2
Npc1-201ENSMUST00000025279 Krtap5-1Q64507 230 aa1.3□□□□□ -2.2
Npc1-201ENSMUST00000025279 Gm4559A4IF42 199 aa1.04□□□□□ -2.24
Retrieved 80 of 22,080 RNA–protein pairs in 8.6 ms