RNA–Protein interactions for RNA: ENSMUST00000020397.10

Snrpd3-201, Transcript of Small nuclear ribonucleoprotein Sm D3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrpd3, Length 3,036 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrpd3-201ENSMUST00000020397 Lce1bQ9D149 137 aa3.5□□□□□ -1.85
Snrpd3-201ENSMUST00000020397 Krtap6-3A0A087WQL6 57 aa3.49□□□□□ -1.85
Snrpd3-201ENSMUST00000020397 Sprr2gO70558 76 aa3.43□□□□□ -1.86
Snrpd3-201ENSMUST00000020397 Lce1eQ9D139 143 aa3.42□□□□□ -1.86
Snrpd3-201ENSMUST00000020397 4933428G20RikQ9D3X4 101 aa3.41□□□□□ -1.86
Snrpd3-201ENSMUST00000020397 Mt4P47945 62 aa3.41□□□□□ -1.86
Snrpd3-201ENSMUST00000020397 Fsip2A2ARZ3 6995 aa3.4□□□□□ -1.86
Snrpd3-201ENSMUST00000020397 Gm11938Q9D3H4 131 aa3.39□□□□□ -1.87
Snrpd3-201ENSMUST00000020397 Krtap22-2J3QNX6 67 aa3.38□□□□□ -1.87
Snrpd3-201ENSMUST00000020397 Sprr2dO70555 85 aa3.34□□□□□ -1.88
Snrpd3-201ENSMUST00000020397 Krtap4-13Q9D7P3 165 aa3.34□□□□□ -1.88
Snrpd3-201ENSMUST00000020397 Gm10272F7CZ33 110 aa3.26□□□□□ -1.89
Snrpd3-201ENSMUST00000020397 2300003K06RikA2A4M0 262 aa3.25□□□□□ -1.89
Snrpd3-201ENSMUST00000020397 Sprr2kO70562 68 aa3.23□□□□□ -1.89
Snrpd3-201ENSMUST00000020397 Lce1cQ9D1C5 147 aa3.22□□□□□ -1.89
Snrpd3-201ENSMUST00000020397 Krtap20-2E9Q0A8 60 aa3.21□□□□□ -1.9
Snrpd3-201ENSMUST00000020397 Krtap4-7Q9D732 168 aa3.2□□□□□ -1.9
Snrpd3-201ENSMUST00000020397 Lce1lQ9D1G7 135 aa3.18□□□□□ -1.9
Snrpd3-201ENSMUST00000020397 Gm38119A0A0A6YX29 146 aa3.17□□□□□ -1.9
Snrpd3-201ENSMUST00000020397 Gm10100J3QK64 120 aa3.13□□□□□ -1.91
Snrpd3-201ENSMUST00000020397 Krtap5-2Q9D5Z7 189 aa3.11□□□□□ -1.91
Snrpd3-201ENSMUST00000020397 Lce1fB9EJP6 147 aa3.11□□□□□ -1.91
Snrpd3-201ENSMUST00000020397 Lce1a1Q9CQH5 143 aa3.11□□□□□ -1.91
Snrpd3-201ENSMUST00000020397 A0A1Y7VJ07 166 aa3.1□□□□□ -1.91
Snrpd3-201ENSMUST00000020397 Lce3bQ9CQM7 98 aa3.08□□□□□ -1.92
Snrpd3-201ENSMUST00000020397 Krtap19-4Q925H7 84 aa3.07□□□□□ -1.92
Snrpd3-201ENSMUST00000020397 Gm10142J3KMP7 120 aa3.07□□□□□ -1.92
Snrpd3-201ENSMUST00000020397 Sprr2iO70560 76 aa3.06□□□□□ -1.92
Snrpd3-201ENSMUST00000020397 Eppk1Q8R0W0 6548 aa3.04□□□□□ -1.92
Snrpd3-201ENSMUST00000020397 Lce3cQ91V05 98 aa2.98□□□□□ -1.93
Snrpd3-201ENSMUST00000020397 Gm4553A0A1B0GSA9 284 aa2.97□□□□□ -1.93
Snrpd3-201ENSMUST00000020397 Lce3dE9Q8V1 98 aa2.96□□□□□ -1.94
Snrpd3-201ENSMUST00000020397 Gm11559Q9D3H7 191 aa2.96□□□□□ -1.94
Snrpd3-201ENSMUST00000020397 Syne1Q6ZWR6 8799 aa2.96□□□□□ -1.94
Snrpd3-201ENSMUST00000020397 Sprr2hO70559 108 aa2.95□□□□□ -1.94
Snrpd3-201ENSMUST00000020397 Sprr2eO70556 76 aa2.91□□□□□ -1.94
Snrpd3-201ENSMUST00000020397 Sprr2fO70557 76 aa2.9□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Lce3eF8VQJ0 98 aa2.9□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Lce3fQ6PAI4 98 aa2.9□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Gm45337A0A1B0GS71 263 aa2.89□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Gm11568A2A4M2 211 aa2.88□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Krtap9-1Q64526 186 aa2.88□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Macf1Q9QXZ0 7354 aaKnown RBP2.87□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Lce1kJ3QP15 125 aa2.87□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Kmt2dQ6PDK2 5588 aa2.85□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Lce3aQ497I5 98 aa2.85□□□□□ -1.95
Snrpd3-201ENSMUST00000020397 Gm2431E9Q8S1 172 aa2.82□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Gm40460A0A1B0GR10 244 aa2.81□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Gm7579A0A1B0GRJ4 243 aa2.81□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Krtap5-5Q2TA51 241 aa2.81□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Krtap5-4Q62220 223 aa2.81□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Gm10153A0A1B0GRL1 320 aa2.79□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 A030014E15RikA0A1Y7VJV2 120 aa2.79□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Muc16A0A140LJ72 8478 aa2.79□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 ObscnA2AAJ9 8891 aaKnown RBP2.79□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Krtap4-16Q91W93 202 aa2.78□□□□□ -1.96
Snrpd3-201ENSMUST00000020397 Gm39115A0A1B0GSH7 232 aa2.74□□□□□ -1.97
Snrpd3-201ENSMUST00000020397 Mt1P02802 61 aaKnown RBP2.72□□□□□ -1.97
Snrpd3-201ENSMUST00000020397 Gm11639A0A1D5RLM8 5808 aa2.71□□□□□ -1.97
Snrpd3-201ENSMUST00000020397 Gm11554B1AQB2 190 aa2.69□□□□□ -1.98
Snrpd3-201ENSMUST00000020397 Gm10024A0A0A0MQA4 119 aa2.58□□□□□ -2
Snrpd3-201ENSMUST00000020397 Gm45618A0A1B0GSA0 219 aa2.56□□□□□ -2
Snrpd3-201ENSMUST00000020397 Hmcn1D3YXG0 5634 aa2.52□□□□□ -2.01
Snrpd3-201ENSMUST00000020397 Mt3P28184 68 aa2.51□□□□□ -2.01
Snrpd3-201ENSMUST00000020397 Muc19Q6PZE0 7524 aa2.5□□□□□ -2.01
Snrpd3-201ENSMUST00000020397 Gpr98Q8VHN7 6298 aaKnown RBP2.45□□□□□ -2.02
Snrpd3-201ENSMUST00000020397 DstQ91ZU6 7393 aaKnown RBP2.44□□□□□ -2.02
Snrpd3-201ENSMUST00000020397 NebE9Q1W3 7152 aa2.43□□□□□ -2.02
Snrpd3-201ENSMUST00000020397 AhnakE9Q616 5656 aaKnown RBP2.4□□□□□ -2.03
Snrpd3-201ENSMUST00000020397 Gm29735A0A1B0GT06 219 aa2.09□□□□□ -2.07
Snrpd3-201ENSMUST00000020397 1110025L11RikO09048 78 aa2.01□□□□□ -2.09
Snrpd3-201ENSMUST00000020397 Krtap6-5Q925H3 78 aa2.01□□□□□ -2.09
Snrpd3-201ENSMUST00000020397 Sprr2bO70554 98 aa1.91□□□□□ -2.1
Snrpd3-201ENSMUST00000020397 Gm11567Q9D141 195 aa1.84□□□□□ -2.12
Snrpd3-201ENSMUST00000020397 Gm10229O08631 77 aa1.77□□□□□ -2.13
Snrpd3-201ENSMUST00000020397 Phgr1Q8K0G7 91 aa1.73□□□□□ -2.13
Snrpd3-201ENSMUST00000020397 Krtap5-1Q64507 230 aa1.69□□□□□ -2.14
Snrpd3-201ENSMUST00000020397 Krtap21-1Q925H4 128 aa1.67□□□□□ -2.14
Snrpd3-201ENSMUST00000020397 Gm4559A4IF42 199 aa1.6□□□□□ -2.15
Snrpd3-201ENSMUST00000020397 Krtap6-2O08884 159 aa1.55□□□□□ -2.16
Retrieved 80 of 22,080 RNA–protein pairs in 162.1 ms